FFCP PHASE1:Hg19::chr11:70672700..70672711,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-55bp_to_ENST00000423696_5end | |||
|cluster_id=chr11:70672700..70672711,- | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_21_at_SHANK2_5end | |||
|id=chr11:70672700..70672711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.19e-54!22;UBERON:0001950!7.11e-54!20;UBERON:0001869!7.66e-51!32;UBERON:0001049!8.30e-49!57;UBERON:0005068!8.30e-49!57;UBERON:0006241!8.30e-49!57;UBERON:0007135!8.30e-49!57;UBERON:0000956!8.03e-48!25;UBERON:0000203!8.03e-48!25;UBERON:0001893!1.24e-47!34;UBERON:0002020!2.71e-47!34;UBERON:0003528!2.71e-47!34;UBERON:0005743!3.67e-46!86;UBERON:0001017!8.86e-46!82;UBERON:0002791!2.72e-44!33;UBERON:0002780!9.49e-43!41;UBERON:0001890!9.49e-43!41;UBERON:0006240!9.49e-43!41;UBERON:0003080!1.26e-41!42;UBERON:0000073!3.93e-41!94;UBERON:0001016!3.93e-41!94;UBERON:0002616!4.97e-40!59;UBERON:0000955!1.13e-38!69;UBERON:0006238!1.13e-38!69;UBERON:0002346!7.25e-36!90;UBERON:0003075!3.32e-35!86;UBERON:0007284!3.32e-35!86;UBERON:0003056!8.89e-30!61;UBERON:0007023!2.76e-28!115;UBERON:0000153!1.03e-22!129;UBERON:0007811!1.03e-22!129;UBERON:0000033!2.54e-22!123;UBERON:0000924!1.66e-20!173;UBERON:0006601!1.66e-20!173;UBERON:0004121!1.05e-19!169;UBERON:0001871!3.33e-18!7;UBERON:0000200!3.45e-17!6;UBERON:0001872!9.51e-14!5;UBERON:0002021!1.95e-13!5;UBERON:0000349!3.15e-13!5;UBERON:0000025!8.65e-12!194;UBERON:0001870!6.29e-10!2;UBERON:0001876!2.53e-09!2;UBERON:0004111!5.89e-09!241;UBERON:0003076!8.89e-09!15;UBERON:0003057!8.89e-09!15;UBERON:0000064!1.05e-08!219;UBERON:0000477!7.72e-08!286;UBERON:0002298!8.52e-08!8;UBERON:0002420!1.48e-07!9;UBERON:0007245!1.48e-07!9;UBERON:0010009!1.48e-07!9;UBERON:0010011!1.48e-07!9;UBERON:0000454!1.48e-07!9;UBERON:0000475!6.89e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;3.99e-50;1!UBERON:0001950;5.49e-22;20!UBERON:0002619;3.62e-20;22!UBERON:0000956;5.83e-18;25!UBERON:0000203;5.83e-18;25!UBERON:0001870;9.45e-18;3!UBERON:0003528;8.45e-13;34!UBERON:0002020;8.45e-13;34!UBERON:0002791;5.40e-12;32!UBERON:0001869;1.13e-11;32!UBERON:0001893;1.13e-11;34!UBERON:0001872;3.26e-11;5!UBERON:0001016;2.21e-10;83!UBERON:0000955;3.00e-09;68!UBERON:0002780;9.03e-09;41!UBERON:0001890;9.03e-09;41!UBERON:0000073;2.75e-08;53!UBERON:0002616;2.75e-08;53!UBERON:0001017;3.83e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,2.42e-50,1;UBERON:0001950,5.49e-22,20;UBERON:0002619,3.62e-20,22;UBERON:0000956,5.83e-18,25;UBERON:0000203,5.83e-18,25;UBERON:0001870,9.46e-18,3;UBERON:0002791,2.31e-14,32;UBERON:0001869,2.31e-14,32;UBERON:0003528,1.35e-13,34;UBERON:0002020,1.35e-13,34;UBERON:0001893,1.35e-13,34;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0001872,3.60e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0003056,4.61e-08,61 | |||
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|short_description=p21@SHANK2 | |||
}} |
Latest revision as of 23:23, 19 September 2015
Short description: | p21@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SHANK2_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | -55bp_to_ENST00000423696_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insula | 2.42e-50 | 1 |
neocortex | 5.49e-22 | 20 |
regional part of cerebral cortex | 3.62e-20 | 22 |
cerebral cortex | 5.83e-18 | 25 |
pallium | 5.83e-18 | 25 |
frontal cortex | 9.46e-18 | 3 |
regional part of telencephalon | 2.31e-14 | 32 |
cerebral hemisphere | 2.31e-14 | 32 |
brain grey matter | 1.35e-13 | 34 |
gray matter | 1.35e-13 | 34 |
telencephalon | 1.35e-13 | 34 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
regional part of forebrain | 1.73e-11 | 41 |
forebrain | 1.73e-11 | 41 |
anterior neural tube | 1.73e-11 | 41 |
future forebrain | 1.73e-11 | 41 |
parietal lobe | 3.60e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
pre-chordal neural plate | 4.61e-08 | 61 |