FFCP PHASE1:Hg19::chr11:67007611..67007622,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13606 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=36bp_to_uc010rpn.1_5end | |||
|cluster_id=chr11:67007611..67007622,+ | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_6_at_KDM2A_5end | |||
|id=chr11:67007611..67007622,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.34e-22!172;CL:0000566!4.34e-22!172;CL:0000738!4.97e-21!140;CL:0000988!4.69e-20!182;CL:0002032!6.69e-20!165;CL:0000837!6.69e-20!165;CL:0000542!3.65e-19!53;CL:0000051!3.65e-19!53;CL:0000838!7.55e-19!52;CL:0002031!7.62e-15!124;CL:0002087!1.22e-14!119;CL:0000791!3.16e-11!18;CL:0000789!3.16e-11!18;CL:0002420!3.16e-11!18;CL:0002419!3.16e-11!18;CL:0000790!3.16e-11!18;CL:0000084!4.61e-11!25;CL:0000827!4.61e-11!25;CL:0000003!2.97e-08!722;CL:0000625!2.02e-07!11;CL:0000945!2.38e-07!24;CL:0000826!2.38e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.12e-17;18!CL:0000789;2.12e-17;18!CL:0002419;2.12e-17;18!CL:0000542;3.51e-14;53!CL:0000084;7.79e-14;25!CL:0000625;3.21e-11;11!CL:0000236;8.03e-11;13!CL:0000624;2.61e-09;6!CL:0002139;6.68e-07;24!CL:0000097;8.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.03e-22,53;CL:0000051,5.03e-22,53;CL:0000838,1.97e-21,52;CL:0000738,4.32e-21,136;CL:0000037,9.75e-21,168;CL:0002032,9.90e-19,161;CL:0000837,9.90e-19,161;CL:0000988,1.48e-18,177;CL:0000791,9.46e-18,18;CL:0000789,9.46e-18,18;CL:0002420,9.46e-18,18;CL:0002419,9.46e-18,18;CL:0000790,9.46e-18,18;CL:0002031,8.89e-16,120;CL:0002087,1.82e-14,115;CL:0000084,4.11e-14,25;CL:0000827,4.11e-14,25;CL:0000625,1.49e-11,11;CL:0000236,8.63e-10,14;CL:0000624,2.49e-09,6;CL:0000097,5.84e-07,5;CL:0002028,5.84e-07,5;CL:0002139,6.31e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.12e-17;18!CL:0000051;3.51e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0,0.491467873003018,1.39560233594486,0.218441372130172,0,0,0,0.672325146451775,0,0,0.975865597581014,0.492484232307152,0.408001382488506,0.313454721478088,0.286235987131057,0,0.125542639594803,0.458480434487708,0.821005894499457,0.393553906568396,7.86728553697808,24.5650814782216,5.88301268601089,1.83884244895785,0.30120591877825,0.739508020333575,0.697204805222715,1.27952309238679,2.34880351467878,3.87796785972314,5.01361118675354,4.55722828503289,0.447830948479849,0.32389366601898,0.515151135268373,0.290796477559129,0.377875943688809,0.485168122375632,0.697287110717054,0,0.929119112685311,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,1.34834090667051,0.918251677112708,0.641858054152187,0,0,0.199463657621632,0.426224750532694,0.870627715885752,0,0.622822248995575,0,1.0429658368404,0.217188844705117,0.605399502633369,1.47311054395026,1.26584954976354,0.845021145247767,2.33864729961548,0.628975936525128,1.46027220490444,0.901061357049038,1.44653028027372,0,1.59133341759272,0.365328307529268,3.51992488922645,1.63841583378639,3.55803701545422,2.13365111283254,2.00197993518006,3.4485146397269,2.64417949113945,0.954053754535364,7.39976859842283,11.1575065980478,9.93910393125595,3.96513985737078,3.92355994087075,1.58030450865046,9.44206896546399,17.6854843237124,11.5136839439725,2.50779743086017,2.60737813306872,4.73447805734733,1.94826728407911,5.79334375802903,10.0166008541445,6.20294904834139,11.6445661418957,2.5618263945135,2.60118695119756,1.97325485524411,1.93445012450094,3.76744011455568,1.77943875794473,2.1403266247177,5.22677619024884,2.71942422474159,9.19729184644611,5.49803912772208,11.3858861408776,3.18565414324097,1.95325036156926,3.8018081777935,3.01150238155546,1.66382594500744,3.74792179657038,2.60454977248419,0.821127996921047,19.3542473495743,13.6394499849589,11.5859523106239,0,0,0.12786256184353,0,0.50133791063589,0,0,0.486634870302636,0.378139268656271,0,0.263504357079378,0.523916301990851,0,0,0,0,0.26591592103773,0.715471872916026,0.571994910780128,0.74291500265913,2.38514888840046,1.72046919021225,0.694281003215189,1.69592382577203,0.419499436209906,1.92582629358047,1.67195973229448,1.29208379584664,1.06729878806013,0.33472061276467,1.20848795132744,0.760272105718513,1.22031028774085,2.20597848207521,1.62028389576352,0.535798369704479,0.44905874525234,0.337834441449967,0,3.79706263827252,1.09921046358244,2.63560834872127,7.75560528296651,0.436094052142534,0,0.506522046658319,1.32409180813219,0.286836620748814,0,0,4.2699598291882,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.70296429550139,0,1.1409436430889,0.149448680551801,0.23486899728753,0.323745888736263,0,0,0.368502951935304,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.680593098960126,0.538168907066586,0,0.211931901159562,0.300091096084402,0.309157587715317,0.515281080091258,0,1.18143432568886,0.194874010322397,0.504867548488229,0.0920498986422993,0.323292113637624,1.06502877754984,0.201504196455281,0.508681776931463,0.386521706326594,0.545492241181669,0.860413786167011,0.487894824518382,0.265059536642971,0.580969714347592,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0.441463099414651,0.983907508344908,0,0.878002283269004,2.24803506515239,0.100528972411631,0.277765335475589,0.651616610620649,1.03993478527958,0,0,0.234817388471643,1.15493158208859,0.462985512576611,1.33177906564219,0.790204397959275,0,0.492434012174795,0,0,0.93733833986777,0.503946384596579,1.13420077793909,0,0.581267877027924,0,1.97065295158377,1.23267807618516,9.32976519933474,5.6206781832615,6.18587923789262,0.126995788584338,0,0,3.4214489204541,0.205654985406647,0,0,0.672786506072164,0.87192013766656,0.51336800074665,0.646358578788889,0,0,0,1.04007436911366,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0.65147236858747,0,0,0.301439377059586,0,0.399891964728228,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.672510863961164,18.914952979385,18.1127162881995,13.8610479182128,1.01637849688985,1.30139853857622,0,0.502548796003046,1.91381625495949,0.749007023947182,0,1.65766205374414,0,0.500170521059677,0,0.415941723061614,0.356857977594324,0,0.35142424497814,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,4.54889657470352,4.96142661882819,5.33637789017222,0.303127571446259,1.66435439510497,0,0,0.61384789315225,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0.164254312027618,0,0.348631135379878,0.966875596732978,0,0,0.34444334449382,0.364182336013434,0.393373244878272,0.451199612907412,0,0.784349769176855,1.46139224653261,0.105551628892876,1.13733384070897,0.510281115829547,0.215915916102139,3.08454505380579,0,0.501689773854853,0.764628819135115,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0.322260734604821,0.290033387828457,0.170453254832202,0.0890320356467374,0.330569830721956,0.192190067365106,1.40373983744043,0,0,1.5740617341532,1.3940745403212,0.308033580176089,0.532306030317022,0,0.74129687641568,0.143124886741991,0,1.2655176988749,0.38126038784765,0.511795582622668,0,0,0,0.179872457583315,0,0,1.41527737101321,0,1.26377536871694,0.48763373908959,0.731140468893853,0,0,0.282810863907425,0,0.551365343546124,2.65375590096488,0.876901770507525,0,0,0.608731130888112,2.16876448669825,0.563391205064483,0.717056761020258,0.0982490410131212,1.78335525740625,0,0.211107635297664,0,0.75894634753143,0,0.384888450902048,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0,1.13929437434833,0.952927101831156,0.411362273086194,1.94541993357815,1.08006287447623,0,0,0,3.43056302373444,1.11481905075431,0.28853842595289,0.142283686696828,0.637705090915289,1.39705560002972,0.766021480529467,1.05836791361941,0.649243880549111,1.40398589056729,0.912938716132769,0.47003968731907,0,0.50787533340481,0,0,0,0.687010689511529,0.307240764308458,0.223676107892416,0.500547425135725,0.781552381608161,0,1.23087398947712,0.540911356951966,0.99921590399346,1.4098700508785,0.18714054040822,0.146508179271894,0.242721043499027,0.66866030566487,0,0.23874448473769,0,0,0.994147647766298,0,0.779160935160341,0.494411622680279,0.211125408127993,0.19924798825107,0.828851746593443,0,0.818149460017238,0.615424027305347,0,0.808815160325942,0,0,0.197286811273867,2.3948309234694,0,0,0.185536196323703,0,0.520855522170466,0.174919999992391,0,0.568967241427498,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.230850775511391,0.91153644677601,0.46112780877612,0.807818799687949,0,0.31900115973192,0.0915975934018623,0.533034776018635,1.02193298195737,1.8837630767403,0.997270091400938,0.225595660617181,0.392125068635479,0.503464760927528,0.569261198172555,1.90723894776454,0.421996129056054,1.14262965711403,0.989471500037586,0.216388639742091,0,0.176915129006678,0,0.593042257361244,0.370691816839509,0.939797545549098,0.337005664903385,0,0.234264445725339,1.27718352450966,1.56531695145672,0.728341138602278,0,0,0.30607276163049,0.31593289814244,0.751617097072463,0.103688191397247,0,0.330991955875499,0.941798755221676,1.19472429772959,0.853828638089378,0.693373365065693,0.173559738335131,0.881931576729399,0.609414446062818,0.17472666824203,0.171986032471617,0.387025325156341,0.365446585430928,0.328461828212837,0.193978032976839,0.0882561266915003,0,0.137041924646751,0.397429223405979,0,0.782205530939212,1.52301758477914,0.213452994739353,0.599428828746391,0,0.343609788497747,0.514784993585894,1.1524383839052,0.49701014226173,0,0.135904206073614,0,0.305994652908965,0.577901179803038,0.600420288709789,0,3.83239764200917,0.429765441419957,0.788662062837943,0.558564802544508,0.229160424011684,1.43574604915363,0.199679000498991,0,0.223171457441873,0.0671834724867263,0.720599767084807,0,0.315132729228895,0.164831716762333,0.13480708770837,0.295282444544246,0.931406652723629,0,0.136203406111576,1.28602518772015,0.412618309791701,2.49264202817511,2.4747128070665,1.5476039091159,0.0607495566580247,0.335434687599266,0.0788057072991982,0.0524545881349981,1.5840050477911,0.717149357331379,0.191915197319445,0,0,0,0,0,0.326587360109409,0,1.06720276974141,0.340776043570843,1.13312091520126,0.293104467356165,0,0.387848869084652,0,0,0,0.106787412567695,0.471612915298998,0,1.48849806543585,1.38328142328561,1.21792598380896,0.638341257770182,0,0,0.306345576763462,0,0.314108192500469,0.886068179966986,0.244052529803926,0.1251909307065,0.573409195690071,0,0.248385611765534,0.553394539744923,1.37478448758317,0.454947352624943,1.7127920012698,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.686520205190771,0.302461847526478,0.466311601748341,0.887130899937803,0.477890301491107,0,0.465788870628778,0.414706207840855,0,0,0.300515217994437,0.761610424337591,1.62748293281865,0.363697318405119,0.859284456339908,0.464033759878494,0.796191777397232,0.800055529326307,0,0,0,0.192619830407303,1.28664954824955,0.260994291965212,0.906823702049089,0,0,0.895444205407437,0,0.438568099157414,0,0.771656153083659,0.844712203265363,0,0,0.607719912354764,0.276516872303462,0.779441235357554,0.797189041880179,0.981392365535065,0.327609848846413,0.737318726261158,0,1.9998739585493,0.106691729694141,0.344429959321631,0,3.68211900503681,0,0,0.383683113910955,0.431299245586727,0,0,0,0.212574920101683,0,0.558644917973244,0,0.552032215008773,0.80057074828547,1.05802783107205,0.3062454773532,0.128458450192919,1.41696576325585,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0,0,0.196295437002051,1.1796972334774,0.733714394086716,0.693153996902029,0,1.3807198521202,0.198916222116275,0.150420656698515,0.40341013740704,0,0.785720083444267,0.49131575253029,1.6264169483875,0.337687923091973,0,0.206686796501184,0.253663240775627,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0.266107110487916,0.230467975111559,3.25827217931095,0.271878931907327,0.197318320688547,0.709163045303809,0.778619813244484,0.156986185701028,0,0.560544326627578,0,0.215927591218621,0.9555033757741,0.214429632529969,0.316027223465453,0.116241425368125,0,0.801711364730253,0,0,0,0,0.828324005113957,0.0852134047591577,0.423387050190929,0.4582137370881,1.5510319283216,0,0.111855431797792,0.883352102537187,0.121917924982269,0,0.205325613712494,0,0,0.467878926924211,0.198950775161368,0,0.67767649223376,0.769583617218004,3.01925687133347,0.154348316215889,0,0,0,1.41405928260976,0.196308467114945,0,0.8453114551668,0,0.939839179798536,0.644578879735772,0.199882311849858,0.71421575442263,2.47026410200984,3.77134423439091,0,0.458729283404541,0.143339583151451,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.437062287854782,0.126698501011437,1.01988829741982,0,0.275684698604535,1.0028301571695,0.303114792872958,2.41167717140561,0,0.103432995861895,0.213233981900981,0.23806443146374,0.193766729508018,0.124149428591716,0.897054900644907,0.12729431655633,0.808468755832877,0.435433495793923,0.342233301085281,1.0776328482334,0.573777643141411,0,0.244209805832924,0.747091421144008,0,0.0898252021065869,0,0.611207220914332,0,0,0.402547587182052,0.641136984606466 | |||
|short_description=p6@KDM2A | |||
}} |
Latest revision as of 16:54, 19 September 2015
Short description: | p6@KDM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KDM2A_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 36bp_to_uc010rpn.1_5end |
EntrezGene: | KDM2A |
HGNC: | 13606 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.03e-22 | 53 |
common lymphoid progenitor | 5.03e-22 | 53 |
lymphoid lineage restricted progenitor cell | 1.97e-21 | 52 |
leukocyte | 4.32e-21 | 136 |
hematopoietic stem cell | 9.75e-21 | 168 |
hematopoietic oligopotent progenitor cell | 9.90e-19 | 161 |
hematopoietic multipotent progenitor cell | 9.90e-19 | 161 |
hematopoietic cell | 1.48e-18 | 177 |
mature alpha-beta T cell | 9.46e-18 | 18 |
alpha-beta T cell | 9.46e-18 | 18 |
immature T cell | 9.46e-18 | 18 |
mature T cell | 9.46e-18 | 18 |
immature alpha-beta T cell | 9.46e-18 | 18 |
hematopoietic lineage restricted progenitor cell | 8.89e-16 | 120 |
nongranular leukocyte | 1.82e-14 | 115 |
T cell | 4.11e-14 | 25 |
pro-T cell | 4.11e-14 | 25 |
CD8-positive, alpha-beta T cell | 1.49e-11 | 11 |
B cell | 8.63e-10 | 14 |
CD4-positive, alpha-beta T cell | 2.49e-09 | 6 |
mast cell | 5.84e-07 | 5 |
basophil mast progenitor cell | 5.84e-07 | 5 |
endothelial cell of vascular tree | 6.31e-07 | 24 |