FFCP PHASE1:Hg19::chr11:67007445..67007459,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13606 | |||
|TSSclassifier=strong | |||
|UniProt=D4QA03,E7EMR1,E9PIL6 | |||
|association_with_transcript=-58bp_to_ENST00000308783,ENST00000446134,ENST00000530342_5end | |||
|cluster_id=chr11:67007445..67007459,+ | |||
|description=CAGE_peak_4_at_KDM2A_5end | |||
|id=chr11:67007445..67007459,+ | |||
|ontology_enrichment_celltype=CL:0000838!7.41e-10!52;CL:0000542!9.04e-10!53;CL:0000051!9.04e-10!53;CL:0000945!2.23e-07!24;CL:0000826!2.23e-07!24;CL:0000236!5.39e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.57e-08;24!CL:0000236;2.18e-08;13!CL:0000542;3.63e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.60e-13,52;CL:0000542,3.04e-12,53;CL:0000051,3.04e-12,53;CL:0000236,6.09e-09,14;CL:0000945,7.95e-09,24;CL:0000826,7.95e-09,24;CL:0000738,1.30e-08,136;CL:0002031,5.22e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;3.63e-08;53 | |||
|ontology_enrichment_disease=DOID:0050687!2.18e-07!143;DOID:305!3.31e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.02e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.76e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.82e-07,22;UBERON:0001869,2.18e-07,32;UBERON:0003528,3.71e-07,34;UBERON:0002020,3.71e-07,34;UBERON:0001950,5.88e-07,20 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,5.06599756336621,0.631719873426831,1.04474251279935,0.737201809504527,0.697801167972428,0.655324116390517,2.37390280405608,0,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.123121058076788,0.612002073732759,0.313454721478088,0.286235987131057,0.821246550437305,0.502170558379211,2.29240217243854,2.79142004129816,1.81034797021462,3.93364276848904,3.83829398097213,1.85779347979291,0.919421224478927,0.90361775633475,0.369754010166788,0.309868802321207,0.568676929949686,3.22960483268332,1.10799081706375,2.4065333696417,2.38711957787437,0,0,0.257575567634187,0.290796477559129,0.755751887377619,0.970336244751265,0.929716147622738,0.411167888021826,0.309706370895104,0,0,0.236482229888585,1.37898272294647,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0,0,0.622822248995575,0,1.0429658368404,0,0,0,0.632924774881769,1.26753171787165,1.4882300997553,1.25795187305026,1.01095768031846,1.05123824989054,0.964353520182481,1.71007646244749,1.39241674039363,1.46131323011707,5.27988733383968,2.18455444504853,4.44754626931777,1.70692089026603,3.60356388332411,2.87376219977242,3.30522436392431,1.90810750907073,8.53819453664173,6.45960908308033,6.49864487812889,2.64342657158052,2.80254281490768,1.05353633910031,10.8190373562608,5.10913991573914,8.22405995998037,0.83593247695339,1.62961133316795,2.8406868344084,0,1.00269411196656,1.47302953737419,1.77227115666897,2.43723477388514,1.15282187753108,1.04047478047903,0.493313713811028,1.38175008892924,0.579606171470105,3.26230438956533,2.67540828089713,1.04535523804977,0.566546713487831,4.98186641682498,0.68725489096526,3.54227568827304,0.637130828648193,0,0,0.602300476311091,0.639933055772092,0,0.947109008176067,0,9.27391018833769,7.48832548193821,8.11016661743674,0,0,0.383587685530591,0,0.50133791063589,0.579386075843295,0,0.486634870302636,0.661743720148475,0.665188192387692,0.527008714158756,1.63723844372141,4.00724817121796,1.85392221392215,0.97364218096405,1.74129737299267,1.32957960518865,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0.838998872419812,0.825354125820202,0.626984899610432,0,0.35576626268671,0.66944122552934,2.01414658554573,1.52054421143703,0.24406205754817,0,1.62028389576352,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0.872188104285069,0.496971951695318,0.25326102332916,0.529636723252875,1.43418310374407,0,1.68203280042692,0,0.74000264525148,0.622422070799533,0.538842688278752,0.163461903113459,0.302714855289863,0,0.468642863667593,0.936480230490962,0.570471821544449,0.298897361103602,0.704606991862589,0.485618833104395,0.280901613404497,0,0.491337269247072,0.413303124703062,1.18800285728205,0.741800787835671,0,1.43723628363248,0,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0.226864366320042,0.179389635688862,0.213557388818567,0.635795703478686,0.900273288253207,0.309157587715317,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.757301322732344,0,0.323292113637624,0,0.201504196455281,0.339121184620975,1.93260853163297,0.545492241181669,0.860413786167011,0.365921118388786,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,1.82488679537915,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.591534000199219,0.337169380156203,0.482022059766964,0.55146986366197,0.217879444092406,0.949082476444386,0.539325232640658,0.392442930250692,0.769494313892781,1.4763109092493,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0.882926198829301,2.58275720940538,0,0.98775256867763,0,0.301586917234893,1.38882667737794,0,0,2.88662684050547,0,0.821860859650752,0.433099343283221,0,0.380508304469197,0.790204397959275,4.29243081047436,0.246217006087397,1.40402559083543,0.594524649154913,0,0.839910640994298,0.283550194484773,0.716468181622786,0,0,0,1.84901711427775,16.5862492432618,7.35011762426503,7.44830357215642,0.126995788584338,1.14596527667483,0,0,0,0.600686115687835,0.285826432630578,0.560655421726804,0,0.7333828582095,0.517086863031111,0,0,0.531876233169741,0,1.02882949704857,0,0.799266537048298,0.142977993658148,0,0.823240336780769,0,0,0,2.41151501647669,1.74306691720059,1.59956785891291,2.43247561282381,0.502257091432126,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,5.71389204585589,6.253199670926,5.51875056002918,2.03275699377971,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0.828831026872071,0,0,0.271265023699736,0.623912584592421,0.356857977594324,0.157702415033935,0.468565659970853,0.300946099727719,0,2.0694614258501,0,0.553107505625109,0.347534457872331,0,1.02943027143257,2.06768026122887,1.72571360654893,1.60091336705167,1.5156378572313,0,1.20956117331872,0,0.920771839728375,0.280660094433074,0,0,0.3217078422872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| |||
|short_description=p4@KDM2A | |||
}} |
Latest revision as of 16:50, 19 September 2015
Short description: | p4@KDM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KDM2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000308783, ENST00000446134, ENST00000530342_5end |
EntrezGene: | KDM2A |
HGNC: | 13606 |
UniProt: | D4QA03E7EMR1E9PIL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.60e-13 | 52 |
lymphocyte | 3.04e-12 | 53 |
common lymphoid progenitor | 3.04e-12 | 53 |
B cell | 6.09e-09 | 14 |
lymphocyte of B lineage | 7.95e-09 | 24 |
pro-B cell | 7.95e-09 | 24 |
leukocyte | 1.30e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 5.22e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.82e-07 | 22 |
cerebral hemisphere | 2.18e-07 | 32 |
brain grey matter | 3.71e-07 | 34 |
gray matter | 3.71e-07 | 34 |
neocortex | 5.88e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.02e-07 | 14 |