FFCP PHASE1:Hg19::chr11:66495843..66495860,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:66495843..66495860,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr11:66495843..66495860,- | |||
|id=chr11:66495843..66495860,- | |||
|ontology_enrichment_celltype=CL:0000066!5.03e-18!254;CL:0002139!3.60e-14!24;CL:0000071!8.97e-12!18;CL:0002546!8.97e-12!18;CL:0002319!9.96e-11!25;CL:0000115!3.54e-09!35;CL:0000133!5.52e-09!59;CL:1000413!7.44e-08!9;CL:0002078!7.75e-08!44;CL:0002321!1.26e-07!248;CL:0000095!2.66e-07!17;CL:0000123!2.66e-07!17;CL:0000220!2.82e-07!246;CL:0000221!3.88e-07!71;CL:0000333!4.41e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.69e-12;5!CL:0000540;1.88e-09;6!CL:0000404;1.88e-09;6!CL:0002319;3.00e-09;25!CL:0000123;4.27e-09;2!CL:0000242;4.27e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.54e-09,6;CL:0000031,1.54e-09,6;CL:0000404,1.54e-09,6;CL:0002319,2.73e-09,25;CL:0000242,4.31e-09,2;CL:0000133,3.63e-07,59;CL:0000047,3.65e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.29e-12;3!CL:0000031;1.88e-09;6 | |||
|ontology_enrichment_disease=DOID:0050687!1.02e-11!143;DOID:305!4.05e-09!106;DOID:171!3.17e-07!10;DOID:162!5.86e-07!235;DOID:14566!6.67e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:171;2.97e-12;10!DOID:169;8.60e-10;6!DOID:3095;5.42e-09;22!DOID:2994;5.42e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.32e-12,10;DOID:169,6.41e-10,6;DOID:3095,3.89e-09,22;DOID:2994,3.89e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000924!5.24e-12!173;UBERON:0006601!5.24e-12!173;UBERON:0001986!8.97e-12!18;UBERON:0004638!8.97e-12!18;UBERON:0004852!8.97e-12!18;UBERON:0000073!1.67e-11!94;UBERON:0001016!1.67e-11!94;UBERON:0004121!5.12e-11!169;UBERON:0000487!6.21e-11!22;UBERON:0006914!6.83e-10!25;UBERON:0005743!3.67e-09!86;UBERON:0001017!4.48e-09!82;UBERON:0000477!1.97e-08!286;UBERON:0000064!2.07e-08!219;UBERON:0004111!2.30e-08!241;UBERON:0000063!2.43e-08!97;UBERON:0000922!3.52e-08!612;UBERON:0003915!7.44e-08!9;UBERON:0004700!7.44e-08!9;UBERON:0001917!7.44e-08!9;UBERON:0002346!1.27e-07!90;UBERON:0000468!2.60e-07!659;UBERON:0002050!5.12e-07!605;UBERON:0005423!5.12e-07!605;UBERON:0000955!7.36e-07!69;UBERON:0006238!7.36e-07!69;UBERON:0000033!7.45e-07!123;UBERON:0000923!8.65e-07!604;UBERON:0005291!8.65e-07!604;UBERON:0006598!8.65e-07!604;UBERON:0002532!8.65e-07!604;UBERON:0000025!9.97e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.69e-12;5!UBERON:0002410;9.69e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.78e-12,5;UBERON:0002410,6.78e-12,5;UBERON:0001016,2.32e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0.273748850145768,0.376627918784408,0,0,0,0.393364276848904,0,0,0.919421224478927,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.966182642624386,0.327447688744282,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,2.82653970962005,1.67799774483962,0.550236083880135,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,3.22263453687318,0.760272105718513,0.976248230192678,0.735326160691737,1.62028389576352,0.17859945656816,0.44905874525234,0.900891843866578,0,2.84779697870439,0.732806975721629,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0.265059536642971,0.348581828608555,0.10366105501537,0.504641701751257,1.09493207722749,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0.55146986366197,0.217879444092406,0,0.539325232640658,0.196221465125346,0.769494313892781,0,1.40241773803446,0,0,0,2.94848165003288,0.590789906681404,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.402115889646523,0,0,0,0,0.231860809950154,0.469634776943287,0.577465791044295,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.508189248444927,0,1.54657762555539,1.34013012267479,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.802025881213139,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0.541892875087706,1.00337954770971,0.509752546090077,0,0.671624264166535,0,0,0,0.656029291399411,0,0.103041011647722,0.824125183365091,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0.490080431962063,0.371606350251437,2.30830740762312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0.422250816255987,0.398495976502139,0,1.0077309914171,1.02268682502155,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0.1137934482855,1.5255219017566,0.236387681767936,4.48166385213904,0.291604613383254,2.08349993919951,0,0,1.52581736317083,4.75490817704266,4.72876190325676,0,0.10893846351899,0,0.153900517007594,0,0.46112780877612,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.37950746544837,0,0,0,0.141353071433941,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0,0,1.27718352450966,0.391329237864179,0,0,0,2.14250933141343,0,0.150323419414493,0.622129148383483,0,0,0,0,0,0,0.694238953340524,0.293977192243133,0.34823682632161,0,0,1.16107597546902,0.65780385377567,0.985385484638511,0.0969890164884194,0,0.451961481561065,0.959293472527256,0.397429223405979,0.189932387867636,0.195551382734803,0,0,0.39961921916426,0.72045208577053,0.343609788497747,2.4023299700675,0.14405479798815,0.124252535565433,1.41416420770077,0.543616824294456,0.313808538937,0,0.288950589901519,0,0.273810757783986,0,0,0,0,0.229160424011684,1.43574604915363,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0.482259445395058,0.275078873194468,1.66176135211674,0,0,0.121499113316049,0,0.315222829196793,0.577000469484979,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,1.19730191562487,0.246277562248017,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0.306345576763462,0,0.471162288750703,0,0.366078794705889,0.1251909307065,0,0.554645257684261,0.248385611765534,2.49027542885215,0.74988244777264,0,0.570930667089935,0,10.7717028335583,13.0428925749743,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0,0.422624246717254,0,0.106691729694141,0.172214979660816,0,0,0.139879507719444,0,4.2205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| |||
|short_description=p@chr11:66495843..66495860,- | |||
}} |
Latest revision as of 01:14, 24 July 2015
Short description: | p@chr11:66495843..66495860, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66495843..66495860, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.54e-09 | 6 |
neuroblast | 1.54e-09 | 6 |
electrically signaling cell | 1.54e-09 | 6 |
neural cell | 2.73e-09 | 25 |
Merkel cell | 4.31e-09 | 2 |
neurectodermal cell | 3.63e-07 | 59 |
neuronal stem cell | 3.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.78e-12 | 5 |
autonomic nervous system | 6.78e-12 | 5 |
nervous system | 2.32e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.32e-12 | 10 |
neuroendocrine tumor | 6.41e-10 | 6 |
germ cell and embryonal cancer | 3.89e-09 | 22 |
germ cell cancer | 3.89e-09 | 22 |