FFCP PHASE1:Hg19::chr11:6640638..6640665,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2073 | |||
|TSSclassifier=strong | |||
|UniProt=E7EV34,O14773,E9PPA4,E9PME9 | |||
|association_with_transcript=0bp_to_ENST00000428886,ENST00000436873,ENST00000453338,ENST00000528571,ENST00000528657,ENST00000528917,ENST00000534644_5end | |||
|cluster_id=chr11:6640638..6640665,- | |||
|coexpression_cluster_id=C687 | |||
|description=CAGE_peak_1_at_TPP1_5end | |||
|id=chr11:6640638..6640665,- | |||
|ontology_enrichment_celltype=CL:0000766!1.02e-35!76;CL:0000839!1.66e-33!70;CL:0000557!2.04e-32!71;CL:0002194!4.63e-31!63;CL:0000576!4.63e-31!63;CL:0000040!4.63e-31!63;CL:0000559!4.63e-31!63;CL:0002009!4.00e-30!65;CL:0000763!3.74e-25!112;CL:0000049!3.74e-25!112;CL:0002057!1.14e-24!42;CL:0000860!1.18e-22!45;CL:0000738!2.56e-14!140;CL:0002031!4.09e-11!124;CL:0000037!7.11e-11!172;CL:0000566!7.11e-11!172;CL:0000988!7.98e-11!182;CL:0002032!3.29e-10!165;CL:0000837!3.29e-10!165;CL:0002087!9.18e-10!119;CL:0002320!1.55e-07!365;CL:0000134!5.08e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.02e-19;39!CL:0000234;1.02e-19;39!CL:0000860;2.15e-19;33!CL:0002057;2.15e-19;33!CL:0000576;2.56e-17;48!CL:0000766;4.56e-16;69!CL:0000763;2.71e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.41e-37,72;CL:0000839,2.07e-35,66;CL:0000557,3.12e-34,67;CL:0002194,4.87e-33,59;CL:0000576,4.87e-33,59;CL:0000040,4.87e-33,59;CL:0000559,4.87e-33,59;CL:0002009,5.59e-32,61;CL:0000473,8.22e-29,48;CL:0000234,8.22e-29,48;CL:0000763,5.20e-26,108;CL:0000049,5.20e-26,108;CL:0000860,1.14e-24,42;CL:0002057,1.14e-24,42;CL:0000738,1.06e-14,136;CL:0002031,1.88e-11,120;CL:0000037,4.17e-11,168;CL:0000988,6.14e-11,177;CL:0002032,1.95e-10,161;CL:0000837,1.95e-10,161;CL:0002087,4.51e-10,115;CL:0002320,1.34e-07,361;CL:0000134,4.40e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.72e-18;42!CL:0000049;6.80e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.15e-32!115;UBERON:0002193!2.31e-32!112;UBERON:0002371!4.41e-29!80;UBERON:0002390!4.76e-29!102;UBERON:0003061!4.76e-29!102;UBERON:0001474!1.85e-26!86;UBERON:0004765!1.52e-19!101;UBERON:0001434!1.52e-19!101;UBERON:0003081!2.16e-18!216;UBERON:0007023!6.67e-13!115;UBERON:0002204!2.10e-09!167;UBERON:0000062!1.54e-07!511;UBERON:0002384!8.47e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.84e-33,108;UBERON:0002405,6.72e-33,93;UBERON:0002371,1.64e-30,76;UBERON:0002390,3.82e-30,98;UBERON:0003061,3.82e-30,98;UBERON:0001474,1.16e-27,82;UBERON:0004765,8.27e-24,90;UBERON:0003081,3.29e-20,203;UBERON:0001434,3.96e-20,100;UBERON:0007023,8.41e-13,114;UBERON:0000926,5.40e-12,315;UBERON:0004120,5.40e-12,315;UBERON:0006603,5.40e-12,315;UBERON:0002204,6.19e-10,167;UBERON:0002384,7.44e-07,371 | |||
|phase1_expression=100.104786978077,94.8465320837055,113.045432084969,69.05057586366,92.0739854520213,88.1061909341372,30.3959853801973,52.432749494427,72.6096046395551,20.1501827931237,45.3570759182078,49.1493087292888,58.2925021884882,56.1899242438612,62.6341040125761,77.9897169884059,70.5152597788053,89.8281411176469,66.8467934342995,49.6177864049455,53.4481811059943,106.261150581072,49.8050617608039,23.1317778373174,29.5025203047787,16.1232286128177,14.6139049220903,16.0569993879906,185.667938672683,115.916478225358,265.045203117122,15.6301608161418,24.3976794210383,25.8827807116751,35.1701090634569,29.1446926599214,58.1328869882998,201.100333297072,196.132469625799,156.464837786129,831.398155852839,571.672320523499,745.68126830097,190.32629456245,227.481318100663,245.252485860882,241.028911271195,280.827667518907,298.247235171985,281.363159691063,292.791687562762,302.933736487278,304.410436090434,314.996525588907,380.5484273301,220.055294925305,253.529813403739,254.611707876281,281.291097088859,376.770677787334,319.668562899521,198.570482712403,250.127426657526,211.833701014749,352.60422493373,397.737042508489,414.176795582057,273.86104512985,257.612561699579,326.869211281201,259.716386629715,482.811980779697,423.110212008462,183.792099091389,174.973338871231,161.646815686958,217.131244006175,205.141635621498,265.357943636879,104.314664209297,112.387922617486,108.137179028663,51.0389108937836,64.4443561289315,63.1551570243124,51.2076267079809,56.4558341720778,56.3257391155394,56.8498590594981,43.8864727086267,73.4284730151188,76.340834618222,63.0750826406628,72.6942307184642,42.5986507865967,71.6404710588209,32.6538218388963,32.6198933081807,43.3819162888964,117.866479250428,39.1106719960308,46.3978849620039,44.8101475338196,136.923451511878,57.7427578650681,62.9156260617484,75.0126702629093,113.873183236125,131.359941035477,73.0104296440322,57.7571537172423,64.3362850331817,40.6305183064046,37.7232567606495,41.8142095219907,73.9910007815107,30.6576394881537,38.4862738940546,45.79656425553,42.0506346907808,38.4139237775287,39.9189858668317,47.5817376285762,62.3294796322018,56.2188269485556,71.5067301172931,53.373319799868,60.6836297106445,44.6625126958457,36.4957497784653,216.988111019426,61.7044790927345,67.3835700915405,36.1439152384566,54.645832259312,56.7798354326429,45.3312989819127,57.9095495660137,52.1832190745655,39.9112915432615,41.3701840614624,87.6250015079698,60.8373131448545,28.1796176516166,297.934507374999,302.115094214229,223.369373671693,193.654386935938,129.270849836309,153.41194804911,72.5482786888474,107.529324388266,88.8679684115441,68.9675689147292,147.663801545887,81.7100584562,67.9233641244634,270.303930091118,313.430077426992,256.395989377737,125.279917620945,75.2669384661327,178.65342612526,56.9877774536096,146.635692566598,55.9016299058339,45.3549332704863,38.7383492862628,56.7271558623768,62.6515335314965,56.242935386635,69.8436212411135,96.9450660370813,49.2786278921064,51.6850829763131,58.8831879240296,137.043502141681,274.789482677364,52.1362521831585,44.2935304112423,53.3744978648525,80.6602883324113,85.8942457703355,52.267740763039,56.7212803803702,144.849058256199,145.19633296896,58.5803579584492,53.3793731379848,42.7853866158337,63.5156892345155,18.9069542816461,17.9678968248626,16.7136459975676,51.2426969849782,33.6566029434244,61.1688624560531,127.11630572918,98.4122378528656,98.2974270893069,143.723628363248,28.2804671442831,26.4000076929844,49.5944766716687,44.3367397089646,49.3445351236422,110.274735237442,37.659484809127,78.034491524655,88.4127589708869,50.2278605748162,117.335618569001,50.9079494437888,72.3969917528218,69.9799379806778,103.291115331655,33.5183297754523,56.7975992049258,59.0960349283562,65.1433608979812,161.884374187576,46.3459651847145,22.0428770003634,41.1645617237822,33.5477728326727,42.1602755221836,30.9813213569172,24.1204178345103,29.0484857173796,37.4216408605487,25.7367267893141,15.6940264402607,56.3218316387337,81.6915991504964,34.5337303381201,79.8712836215004,103.95064536042,30.7597680103594,33.0425992553079,31.0904228549692,28.4558449649576,31.5925193933989,31.3197217226648,30.6067069523573,31.3954344200554,26.5475538293009,138.035070014809,120.607925470963,102.481928821519,120.547143336144,88.7285243752816,83.5403134175982,144.743527136944,23.3975442689765,98.0217855188615,65.7104713443353,41.5953581698691,28.1004383144049,15.9841066134493,42.4055078826066,95.4618334559251,42.6373261964627,41.8560891873293,99.8160786835411,123.748763724556,111.017798328266,89.3562039272859,81.4287771564081,18.1747011530633,22.3206402144667,571.962105141024,332.520060762857,345.418821159004,10.3107217385455,31.2446758449879,18.714312835995,32.3306266957282,20.9256435730053,42.9388600665037,258.64819989537,211.228193197729,166.069820548158,125.240239519339,170.806012425892,185.032863967381,172.658768352341,247.328813613199,130.015058977256,122.981681273175,70.2802755354767,143.770695613181,62.3448828960206,64.5220901873255,34.1756411925627,155.5138740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| |||
|short_description=p1@TPP1 | |||
}} |
Latest revision as of 15:24, 19 September 2015
Short description: | p1@TPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPP1_5end |
Coexpression cluster: | C687_CD14_Macrophage_Monocytederived_Dendritic_Endothelial_Pericytes_schwannoma |
Association with transcript: | 0bp_to_ENST00000428886, ENST00000436873, ENST00000453338, ENST00000528571, ENST00000528657, ENST00000528917, ENST00000534644_5end |
EntrezGene: | TPP1 |
HGNC: | 2073 |
UniProt: | E7EV34O14773E9PPA4E9PME9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.41e-37 | 72 |
myeloid lineage restricted progenitor cell | 2.07e-35 | 66 |
granulocyte monocyte progenitor cell | 3.12e-34 | 67 |
monopoietic cell | 4.87e-33 | 59 |
monocyte | 4.87e-33 | 59 |
monoblast | 4.87e-33 | 59 |
promonocyte | 4.87e-33 | 59 |
macrophage dendritic cell progenitor | 5.59e-32 | 61 |
defensive cell | 8.22e-29 | 48 |
phagocyte | 8.22e-29 | 48 |
myeloid cell | 5.20e-26 | 108 |
common myeloid progenitor | 5.20e-26 | 108 |
classical monocyte | 1.14e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-24 | 42 |
leukocyte | 1.06e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.88e-11 | 120 |
hematopoietic stem cell | 4.17e-11 | 168 |
hematopoietic cell | 6.14e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.95e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-10 | 161 |
nongranular leukocyte | 4.51e-10 | 115 |
connective tissue cell | 1.34e-07 | 361 |
mesenchymal cell | 4.40e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.84e-33 | 108 |
immune system | 6.72e-33 | 93 |
bone marrow | 1.64e-30 | 76 |
hematopoietic system | 3.82e-30 | 98 |
blood island | 3.82e-30 | 98 |
bone element | 1.16e-27 | 82 |
skeletal element | 8.27e-24 | 90 |
lateral plate mesoderm | 3.29e-20 | 203 |
skeletal system | 3.96e-20 | 100 |
adult organism | 8.41e-13 | 114 |
mesoderm | 5.40e-12 | 315 |
mesoderm-derived structure | 5.40e-12 | 315 |
presumptive mesoderm | 5.40e-12 | 315 |
musculoskeletal system | 6.19e-10 | 167 |
connective tissue | 7.44e-07 | 371 |