FFCP PHASE1:Hg19::chr11:65623468..65623497,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1072 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1874 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC024975_5end | |||
|cluster_id=chr11:65623468..65623497,- | |||
|description=CAGE_peak_5_at_CFL1_5end | |||
|id=chr11:65623468..65623497,- | |||
|ontology_enrichment_celltype=CL:0002371!7.40e-22!591;CL:0000548!7.76e-22!679;CL:0000004!7.76e-22!679;CL:0000255!7.76e-22!679;CL:0000144!4.42e-21!625;CL:0000012!7.49e-21!682;CL:0000003!1.26e-16!722;CL:0000222!8.05e-14!119;CL:0000048!7.88e-13!430;CL:0000723!9.00e-13!436;CL:0000034!3.17e-12!444;CL:0000220!2.49e-11!246;CL:0002321!2.92e-11!248;CL:0000055!4.74e-10!180;CL:0000063!1.02e-09!578;CL:0000183!3.39e-08!59;CL:0000393!3.79e-08!60;CL:0000211!3.79e-08!60;CL:0000680!7.14e-08!57;CL:0000056!7.14e-08!57;CL:0000355!7.14e-08!57;CL:0000192!9.64e-08!42;CL:0000514!9.64e-08!42;CL:0002057!2.14e-07!42;CL:0000187!2.45e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-07;33!CL:0002057;2.07e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.61e-14,121;CL:0000048,5.40e-13,427;CL:0000723,6.81e-13,433;CL:0000034,2.49e-12,441;CL:0002321,2.19e-11,250;CL:0000473,2.54e-08,48;CL:0000234,2.54e-08,48;CL:0000393,4.85e-08,61;CL:0000211,4.85e-08,61;CL:0000680,8.33e-08,58;CL:0000056,8.33e-08,58;CL:0000355,8.33e-08,58;CL:0000192,1.54e-07,43;CL:0000514,1.54e-07,43;CL:0000860,1.98e-07,42;CL:0002057,1.98e-07,42;CL:0000187,2.87e-07,55;CL:0002194,5.48e-07,59;CL:0000576,5.48e-07,59;CL:0000040,5.48e-07,59;CL:0000559,5.48e-07,59;CL:0002009,6.33e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.95e-11!216;UBERON:0002204!1.97e-09!167;UBERON:0001637!2.31e-09!42;UBERON:0003509!2.31e-09!42;UBERON:0004572!2.31e-09!42;UBERON:0000055!3.81e-09!69;UBERON:0001981!3.99e-09!60;UBERON:0007500!3.99e-09!60;UBERON:0004537!3.99e-09!60;UBERON:0006965!3.99e-09!60;UBERON:0002049!7.57e-09!79;UBERON:0007798!7.57e-09!79;UBERON:0004290!1.13e-08!70;UBERON:0000914!2.37e-08!83;UBERON:0002329!2.37e-08!83;UBERON:0003077!2.37e-08!83;UBERON:0003059!2.37e-08!83;UBERON:0007282!2.37e-08!83;UBERON:0009618!2.37e-08!83;UBERON:0007285!2.37e-08!83;UBERON:0000486!6.09e-08!82;UBERON:0004573!2.50e-07!33;UBERON:0004571!2.50e-07!33;UBERON:0004872!7.20e-07!84;UBERON:0005256!7.47e-07!143;UBERON:0001134!7.52e-07!61;UBERON:0002036!7.52e-07!61;UBERON:0003082!7.52e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;6.79e-07;74!UBERON:0001637;8.06e-07;42!UBERON:0003509;8.06e-07;42!UBERON:0004572;8.06e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.76e-12,315;UBERON:0004120,7.76e-12,315;UBERON:0006603,7.76e-12,315;UBERON:0007503,3.43e-11,78;UBERON:0003081,2.01e-10,203;UBERON:0002204,1.28e-09,167;UBERON:0001637,2.71e-09,42;UBERON:0003509,2.71e-09,42;UBERON:0004572,2.71e-09,42;UBERON:0000055,9.23e-09,68;UBERON:0007500,1.01e-08,59;UBERON:0001981,1.01e-08,59;UBERON:0004537,1.01e-08,59;UBERON:0006965,1.01e-08,59;UBERON:0002329,1.43e-08,71;UBERON:0003059,1.43e-08,71;UBERON:0007282,1.43e-08,71;UBERON:0004290,1.43e-08,71;UBERON:0009618,1.43e-08,71;UBERON:0002049,1.74e-08,78;UBERON:0007798,1.74e-08,78;UBERON:0007524,2.51e-08,73;UBERON:0003077,4.64e-08,72;UBERON:0007285,4.64e-08,72;UBERON:0000486,7.94e-08,83;UBERON:0004573,3.00e-07,33;UBERON:0004571,3.00e-07,33;UBERON:0001134,9.37e-07,62;UBERON:0002036,9.37e-07,62;UBERON:0003082,9.37e-07,62 | |||
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| |||
|short_description=p5@CFL1 | |||
}} |
Latest revision as of 11:14, 19 September 2015
Short description: | p5@CFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CFL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC024975_5end |
EntrezGene: | CFL1 |
HGNC: | 1874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.61e-14 | 121 |
multi fate stem cell | 5.40e-13 | 427 |
somatic stem cell | 6.81e-13 | 433 |
stem cell | 2.49e-12 | 441 |
embryonic cell | 2.19e-11 | 250 |
defensive cell | 2.54e-08 | 48 |
phagocyte | 2.54e-08 | 48 |
electrically responsive cell | 4.85e-08 | 61 |
electrically active cell | 4.85e-08 | 61 |
muscle precursor cell | 8.33e-08 | 58 |
myoblast | 8.33e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.33e-08 | 58 |
smooth muscle cell | 1.54e-07 | 43 |
smooth muscle myoblast | 1.54e-07 | 43 |
classical monocyte | 1.98e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.98e-07 | 42 |
muscle cell | 2.87e-07 | 55 |
monopoietic cell | 5.48e-07 | 59 |
monocyte | 5.48e-07 | 59 |
monoblast | 5.48e-07 | 59 |
promonocyte | 5.48e-07 | 59 |
macrophage dendritic cell progenitor | 6.33e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 7.76e-12 | 315 |
mesoderm-derived structure | 7.76e-12 | 315 |
presumptive mesoderm | 7.76e-12 | 315 |
epithelial vesicle | 3.43e-11 | 78 |
lateral plate mesoderm | 2.01e-10 | 203 |
musculoskeletal system | 1.28e-09 | 167 |
artery | 2.71e-09 | 42 |
arterial blood vessel | 2.71e-09 | 42 |
arterial system | 2.71e-09 | 42 |
vessel | 9.23e-09 | 68 |
epithelial tube open at both ends | 1.01e-08 | 59 |
blood vessel | 1.01e-08 | 59 |
blood vasculature | 1.01e-08 | 59 |
vascular cord | 1.01e-08 | 59 |
somite | 1.43e-08 | 71 |
presomitic mesoderm | 1.43e-08 | 71 |
presumptive segmental plate | 1.43e-08 | 71 |
dermomyotome | 1.43e-08 | 71 |
trunk paraxial mesoderm | 1.43e-08 | 71 |
vasculature | 1.74e-08 | 78 |
vascular system | 1.74e-08 | 78 |
dense mesenchyme tissue | 2.51e-08 | 73 |
paraxial mesoderm | 4.64e-08 | 72 |
presumptive paraxial mesoderm | 4.64e-08 | 72 |
multilaminar epithelium | 7.94e-08 | 83 |
systemic artery | 3.00e-07 | 33 |
systemic arterial system | 3.00e-07 | 33 |
skeletal muscle tissue | 9.37e-07 | 62 |
striated muscle tissue | 9.37e-07 | 62 |
myotome | 9.37e-07 | 62 |