FFCP PHASE1:Hg19::chr11:65408273..65408341,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |||
|TSSclassifier=strong | |||
|UniProt=F6RY50 | |||
|association_with_transcript=0bp_to_ENST00000394227_5end | |||
|cluster_id=chr11:65408273..65408341,+ | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_3_at_SIPA1_5end | |||
|id=chr11:65408273..65408341,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.76e-58!172;CL:0000566!3.76e-58!172;CL:0002032!3.18e-54!165;CL:0000837!3.18e-54!165;CL:0000988!8.40e-53!182;CL:0000738!3.90e-48!140;CL:0002087!7.20e-41!119;CL:0000763!2.58e-40!112;CL:0000049!2.58e-40!112;CL:0002031!1.56e-38!124;CL:0000766!2.03e-35!76;CL:0000557!5.38e-29!71;CL:0000839!1.51e-27!70;CL:0002194!6.26e-27!63;CL:0000576!6.26e-27!63;CL:0000040!6.26e-27!63;CL:0000559!6.26e-27!63;CL:0002009!4.46e-26!65;CL:0002057!6.87e-26!42;CL:0000860!1.65e-23!45;CL:0000542!4.56e-12!53;CL:0000051!4.56e-12!53;CL:0000838!1.06e-11!52;CL:0002393!1.09e-08!9;CL:0002397!1.09e-08!9;CL:0000791!1.28e-08!18;CL:0000789!1.28e-08!18;CL:0002420!1.28e-08!18;CL:0002419!1.28e-08!18;CL:0000790!1.28e-08!18;CL:0000236!1.48e-08!14;CL:0000094!9.07e-08!8;CL:0000134!1.36e-07!358;CL:0002320!7.12e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;6.99e-26;48!CL:0000860;6.36e-24;33!CL:0002057;6.36e-24;33!CL:0000766;9.34e-23;69!CL:0000473;8.30e-22;39!CL:0000234;8.30e-22;39!CL:0000763;3.44e-20;100!CL:0002087;4.19e-16;104!CL:0000738;3.22e-13;136!CL:0000988;6.57e-13;177!CL:0000236;2.25e-11;13!CL:0000094;2.00e-10;8!CL:0000791;2.03e-09;18!CL:0000789;2.03e-09;18!CL:0002419;2.03e-09;18!CL:0000625;1.24e-08;11!CL:0002393;2.72e-08;6!CL:0002397;2.72e-08;6!CL:0000542;2.26e-07;53!CL:0000081;6.51e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.65e-77,168;CL:0002032,1.06e-71,161;CL:0000837,1.06e-71,161;CL:0000988,2.48e-71,177;CL:0000738,5.44e-63,136;CL:0000763,8.47e-59,108;CL:0000049,8.47e-59,108;CL:0002087,4.02e-54,115;CL:0000766,8.43e-53,72;CL:0002031,6.25e-50,120;CL:0000557,1.14e-42,67;CL:0000839,1.02e-41,66;CL:0002194,1.33e-41,59;CL:0000576,1.33e-41,59;CL:0000040,1.33e-41,59;CL:0000559,1.33e-41,59;CL:0002009,1.39e-39,61;CL:0000473,2.80e-38,48;CL:0000234,2.80e-38,48;CL:0000860,2.48e-36,42;CL:0002057,2.48e-36,42;CL:0000134,4.42e-16,354;CL:0002320,4.50e-15,361;CL:0000542,5.50e-12,53;CL:0000051,5.50e-12,53;CL:0000236,7.06e-12,14;CL:0002393,9.77e-12,9;CL:0002397,9.77e-12,9;CL:0000219,1.28e-11,386;CL:0000838,1.62e-11,52;CL:0000094,2.01e-10,8;CL:0000791,1.97e-09,18;CL:0000789,1.97e-09,18;CL:0002420,1.97e-09,18;CL:0002419,1.97e-09,18;CL:0000790,1.97e-09,18;CL:0000625,8.85e-09,11;CL:0000048,5.59e-08,427;CL:0000034,5.84e-08,441;CL:0000723,1.87e-07,433;CL:0000081,6.51e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.91e-26;42!CL:0000049;5.75e-17;108!CL:0000790;2.03e-09;18!CL:0000051;2.26e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!3.09e-10!31;DOID:1240!6.44e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.60e-13;31!DOID:1240;7.40e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.00e-14,31;DOID:1240,4.07e-12,39;DOID:2531,2.05e-07,51;DOID:0060083,2.05e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.42e-34!102;UBERON:0003061!2.42e-34!102;UBERON:0002193!1.54e-33!112;UBERON:0002371!1.69e-24!80;UBERON:0001474!8.32e-21!86;UBERON:0002405!2.59e-20!115;UBERON:0004765!1.30e-15!101;UBERON:0001434!1.30e-15!101;UBERON:0007023!5.74e-15!115;UBERON:0003081!1.15e-12!216;UBERON:0000178!4.41e-08!15;UBERON:0000179!4.41e-08!15;UBERON:0000463!4.41e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.11e-11;15!UBERON:0000179;9.11e-11;15!UBERON:0000463;9.11e-11;15!UBERON:0002390;1.38e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.89e-49,98;UBERON:0003061,3.89e-49,98;UBERON:0002193,4.41e-45,108;UBERON:0002371,9.56e-37,76;UBERON:0002405,4.27e-35,93;UBERON:0001474,1.80e-32,82;UBERON:0004765,1.08e-27,90;UBERON:0001434,7.31e-23,100;UBERON:0003081,4.16e-17,203;UBERON:0002384,3.84e-14,371;UBERON:0000178,9.05e-11,15;UBERON:0000179,9.05e-11,15;UBERON:0000463,9.05e-11,15;UBERON:0002204,4.36e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0.840547463227464,0.656804715599566,0.314843125254717,13.7677496897116,5.37361157336098,14.7075317150272,0,0,0,0.154934401160603,0.284338464974843,11.1568166947242,18.281848481552,13.8375668754398,14.1057065965304,5.82180233023803,4.53451132426571,4.12120908214698,12.0680538187039,7.935394817465,14.3124596100812,6.27558399645349,4.52284676824008,2.47765096716083,4.02769349251011,4.86705342405291,2.60130452877444,8.27389633767885,7.10033151942209,6.77132432971709,6.02375486536335,5.18521685109907,4.26974620445661,6.73384563215986,5.1348644332175,7.03270838378945,5.27762080298746,4.9865914405408,6.81959600852311,1.7412554317715,1.13477044938228,1.86846674698672,3.01498398308092,5.73631210262222,6.5156653411535,4.23779651843358,1.47311054395026,4.43047342417238,27.8856977931763,32.3158535946866,21.5948404873627,29.3177727292352,30.3357323539843,13.983126042646,22.8010194992999,26.6548347446781,27.947615525989,10.5597746676794,8.7382177801941,11.5636203002262,11.5217160092957,9.6095036888643,12.6445536789986,5.94940385506376,13.3567525634951,15.3687501659551,15.2681669236444,11.4681968437569,14.5388461436928,6.1655941927969,8.95505888235262,0.786839080455332,1.17903228824749,2.2616164889946,4.84840836632966,3.2592226663359,3.78758244587787,3.89653456815823,0.891283655081389,3.82987679717288,2.43687284041983,3.79125409271022,0.768547918354051,2.21100890851793,4.60426132890293,3.03985019564433,3.47763702882063,1.92772532110679,2.40786745280742,4.18142095219907,1.24640276967323,0.766440987203842,2.74901956386104,1.77113784413652,2.54852331459277,2.60433381542567,2.85135613334512,4.9689789295665,3.83959833463255,1.24930726552346,6.86654030927649,7.39015197228942,4.83856183739358,5.34880391567015,5.64815175142916,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,1.30979075497713,0,0,2.27183175558278,0.870648686496336,1.19662164466979,9.06264372360299,8.57992366170192,8.54352253057999,0,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0.357198913136319,0.673588117878509,0.675668882899933,0,0,1.28241220751285,52.7121669744253,50.4114343392823,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0.217879444092406,0,0,0.196221465125346,0,11.0723318193697,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0,0,0,3.44703808522356,0,1.48631162288728,0,0,0,0,0,0,0.492663237895943,5.28290604079356,5.1832028885193,6.48539790376326,3.53478813593864,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,4.86495122564762,6.52934218861764,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,1.12085143993527,10.2455995305002,8.40947541952118,9.36904164842163,0.254094624222463,0,0,0.167516265334349,0,67.4106321552464,98.7232815373282,55.5316788004288,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1993135412504,18.7671354712197,15.7956785549098,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,2.27466768141793,0.340187410553031,0.431831832204279,4.62681758070868,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,1.65409603063837,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,21.3127995877511,19.1159301785594,18.7983571767474,19.2967738120809,18.5113022888787,18.8057260245888,19.9811631778102,19.8281294073568,0,0,0,2.60124445176006,2.01976898167023,0,0,15.7667703431925,10.7243007274125,35.3494883148884,0.649243880549111,20.217396824169,5.70586697582981,11.9076720787498,12.5317238545034,6.94096288986573,6.26293492904428,14.9331783321375,11.9236946553291,4.12206413706918,5.53033375755224,6.48660712888006,5.8397199599168,7.22935952987549,0,3.69262196843137,12.9818725668472,8.65987116794332,0,0,1.46508179271894,0.121360521749513,0,0,0,0.593929361665277,0,0,0.844016498463076,0,0,0,1.39473591775749,4.97311047956066,0,0,0.246169610922139,0,0,0,8.18515792362995,1.08507746200627,7.18449277040819,0,2.90799823828566,0.371072392647405,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.60298219312704,0,0.331737779793674,1.47773809476774,0.438770794307945,0,0,1.00035336054936,0,0,0,0,0.31900115973192,0,0.533034776018635,0,2.04074333313532,8.47679577690798,0.225595660617181,0,0,0,3.81447789552909,0,0.163232808159148,0,0,1.99052386215701,0.973033209536731,3.05515072466813,0,0,0.104421949505455,3.57226004797588,0.802577647298789,1.1713222286267,0,0,0.2427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| |||
|short_description=p3@SIPA1 | |||
}} |
Latest revision as of 10:30, 19 September 2015
Short description: | p3@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIPA1_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_ENST00000394227_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | F6RY50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.89e-49 | 98 |
blood island | 3.89e-49 | 98 |
hemolymphoid system | 4.41e-45 | 108 |
bone marrow | 9.56e-37 | 76 |
immune system | 4.27e-35 | 93 |
bone element | 1.80e-32 | 82 |
skeletal element | 1.08e-27 | 90 |
skeletal system | 7.31e-23 | 100 |
lateral plate mesoderm | 4.16e-17 | 203 |
connective tissue | 3.84e-14 | 371 |
blood | 9.05e-11 | 15 |
haemolymphatic fluid | 9.05e-11 | 15 |
organism substance | 9.05e-11 | 15 |
musculoskeletal system | 4.36e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.00e-14 | 31 |
leukemia | 4.07e-12 | 39 |
hematologic cancer | 2.05e-07 | 51 |
immune system cancer | 2.05e-07 | 51 |