FFCP PHASE1:Hg19::chr11:63526312..63526316,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:63526312..63526316,+ | |||
|description=CAGE_peak_at_chr11:63526312..63526316,+ | |||
|id=chr11:63526312..63526316,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;3.67e-23;1!CL:0000775;8.31e-09;3!CL:0002615;9.31e-09;3!CL:0000135;1.26e-08;3!CL:0000388;1.26e-08;3!CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.28e-23,1;CL:0000775,8.31e-09,3;CL:0002615,9.66e-09,3;CL:0000135,1.40e-08,3;CL:0000388,1.40e-08,3;CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.07e-09!82;UBERON:0005743!2.57e-09!86;UBERON:0000073!4.05e-09!94;UBERON:0001016!4.05e-09!94;UBERON:0001049!2.85e-08!57;UBERON:0005068!2.85e-08!57;UBERON:0006241!2.85e-08!57;UBERON:0007135!2.85e-08!57;UBERON:0001893!9.38e-08!34;UBERON:0002020!1.00e-07!34;UBERON:0003528!1.00e-07!34;UBERON:0001869!1.43e-07!32;UBERON:0002619!1.99e-07!22;UBERON:0000956!3.36e-07!25;UBERON:0000203!3.36e-07!25;UBERON:0002791!3.40e-07!33;UBERON:0002780!3.52e-07!41;UBERON:0001890!3.52e-07!41;UBERON:0006240!3.52e-07!41;UBERON:0001950!4.00e-07!20;UBERON:0000955!4.01e-07!69;UBERON:0006238!4.01e-07!69;UBERON:0003080!7.07e-07!42;UBERON:0002616!7.09e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;2.74e-12;2!UBERON:0005406;2.74e-12;2!UBERON:0001950;4.65e-10;20!UBERON:0002619;3.07e-09;22!UBERON:0007846;1.26e-08;3!UBERON:0000043;1.26e-08;3!UBERON:0007845;1.26e-08;3!UBERON:0000956;3.04e-08;25!UBERON:0000203;3.04e-08;25!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.07e-12,2;UBERON:0005406,2.59e-12,2;UBERON:0001950,4.44e-10,20;UBERON:0002619,2.95e-09,22;UBERON:0007846,1.40e-08,3;UBERON:0000043,1.40e-08,3;UBERON:0007845,1.40e-08,3;UBERON:0000956,2.93e-08,25;UBERON:0000203,2.93e-08,25;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726991193897824,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0,0,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0.441175890929576,0,0.474541238222193,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,5.9832291840805,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0.241718899183244,0,0,0,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.403599414382095,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0.242780379534093,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0.19351266257817,0,0.0821154570532092,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.0787831823072236,0,0,0.196854963029498,0,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,1.19730191562487,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.83039397352945,0.250381861413,0,0,0.124192805882767,0.276697269872462,0,0.151649117541648,0,0.235265819698172,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0.530067437837643,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,1.02558182120378,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0,0,0,0,0.327543835020193,0,0.202612753855184,0,0,0.0634158101939068,1.64092442705466,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0.115233987555779,0.171488009437418,0.135939465953663,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0.11294608203896,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,1.11598505450025,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:63526312..63526316,+ | |||
}} |
Latest revision as of 00:01, 24 July 2015
Short description: | p@chr11:63526312..63526316, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:63526312..63526316, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.28e-23 | 1 |
neutrophil | 8.31e-09 | 3 |
adipocyte of omentum tissue | 9.66e-09 | 3 |
fibrocyte | 1.40e-08 | 3 |
tendon cell | 1.40e-08 | 3 |
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.07e-12 | 2 |
perirenal fat | 2.59e-12 | 2 |
neocortex | 4.44e-10 | 20 |
regional part of cerebral cortex | 2.95e-09 | 22 |
dense regular connective tissue | 1.40e-08 | 3 |
tendon | 1.40e-08 | 3 |
regular connective tissue | 1.40e-08 | 3 |
cerebral cortex | 2.93e-08 | 25 |
pallium | 2.93e-08 | 25 |
cuboidal epithelium | 9.11e-07 | 4 |
transparent eye structure | 9.11e-07 | 4 |
simple cuboidal epithelium | 9.11e-07 | 4 |
cranial placode | 9.11e-07 | 4 |
lens of camera-type eye | 9.11e-07 | 4 |
epithelium of lens | 9.11e-07 | 4 |
lens placode | 9.11e-07 | 4 |
lens vesicle | 9.11e-07 | 4 |