FFCP PHASE1:Hg19::chr11:61100500..61100672,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2717 | |||
|TSSclassifier=strong | |||
|UniProt=B4DG00,F5H198,Q16531 | |||
|association_with_transcript=0bp_to_ENST00000450997,ENST00000537120,ENST00000543162,ENST00000543658,NM_001923,uc001nrc.3,uc001nrd.2,uc009ynl.1,uc010rle.1_5end | |||
|cluster_id=chr11:61100500..61100672,- | |||
|description=CAGE_peak_1_at_DDB1_5end | |||
|id=chr11:61100500..61100672,- | |||
|ontology_enrichment_celltype=CL:0000055!2.42e-19!180;CL:0002321!1.15e-18!248;CL:0000220!2.14e-18!246;CL:0000222!3.50e-12!119;CL:0000183!1.01e-11!59;CL:0000393!4.73e-10!60;CL:0000211!4.73e-10!60;CL:0000187!9.09e-10!54;CL:0000548!1.45e-09!679;CL:0000004!1.45e-09!679;CL:0000255!1.45e-09!679;CL:0000680!2.62e-09!57;CL:0000056!2.62e-09!57;CL:0000355!2.62e-09!57;CL:0000144!2.68e-09!625;CL:0000192!2.98e-09!42;CL:0000514!2.98e-09!42;CL:0000012!5.38e-09!682;CL:0000359!8.40e-09!32;CL:0002371!4.18e-08!591;CL:0000066!7.93e-08!254;CL:0000057!1.07e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.85e-08;32!CL:0000192;9.29e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.73e-19,250;CL:0000222,3.04e-12,121;CL:0000393,1.16e-09,61;CL:0000211,1.16e-09,61;CL:0000187,2.32e-09,55;CL:0000680,6.26e-09,58;CL:0000056,6.26e-09,58;CL:0000355,6.26e-09,58;CL:0000359,8.40e-09,32;CL:0000192,8.58e-09,43;CL:0000514,8.58e-09,43;CL:0000066,5.69e-08,253;CL:0000057,5.84e-08,76 | |||
|ontology_enrichment_development_v019=CL:0000514;9.29e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.23e-13!118;UBERON:0004872!2.96e-13!84;UBERON:0000119!9.85e-13!312;UBERON:0002049!1.80e-12!79;UBERON:0007798!1.80e-12!79;UBERON:0000483!3.16e-12!309;UBERON:0000055!3.26e-12!69;UBERON:0001637!6.81e-12!42;UBERON:0003509!6.81e-12!42;UBERON:0004572!6.81e-12!42;UBERON:0004290!7.40e-12!70;UBERON:0000486!8.00e-12!82;UBERON:0001981!1.30e-11!60;UBERON:0007500!1.30e-11!60;UBERON:0004537!1.30e-11!60;UBERON:0006965!1.30e-11!60;UBERON:0000490!1.98e-11!138;UBERON:0000475!2.67e-11!365;UBERON:0000914!5.60e-11!83;UBERON:0002329!5.60e-11!83;UBERON:0003077!5.60e-11!83;UBERON:0003059!5.60e-11!83;UBERON:0007282!5.60e-11!83;UBERON:0009618!5.60e-11!83;UBERON:0007285!5.60e-11!83;UBERON:0005256!8.98e-11!143;UBERON:0001134!6.43e-10!61;UBERON:0002036!6.43e-10!61;UBERON:0003082!6.43e-10!61;UBERON:0004573!4.17e-09!33;UBERON:0004571!4.17e-09!33;UBERON:0002100!5.14e-09!216;UBERON:0002385!5.55e-09!63;UBERON:0001015!5.55e-09!63;UBERON:0000383!5.55e-09!63;UBERON:0001009!2.93e-08!113;UBERON:0004535!3.21e-08!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.96e-09;42!UBERON:0003509;4.96e-09;42!UBERON:0004572;4.96e-09;42!UBERON:0004573;2.85e-08;33!UBERON:0004571;2.85e-08;33!UBERON:0007500;4.09e-08;56!UBERON:0001981;4.09e-08;56!UBERON:0004537;4.09e-08;56!UBERON:0003914;4.71e-08;74!UBERON:0000055;9.08e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.07e-13,117;UBERON:0000119,2.49e-13,309;UBERON:0007503,2.67e-13,78;UBERON:0000490,5.53e-13,148;UBERON:0004872,6.07e-13,83;UBERON:0000483,8.19e-13,306;UBERON:0002049,3.68e-12,78;UBERON:0007798,3.68e-12,78;UBERON:0000055,6.74e-12,68;UBERON:0001637,6.81e-12,42;UBERON:0003509,6.81e-12,42;UBERON:0004572,6.81e-12,42;UBERON:0000486,1.83e-11,83;UBERON:0002329,1.85e-11,71;UBERON:0003059,1.85e-11,71;UBERON:0007282,1.85e-11,71;UBERON:0004290,1.85e-11,71;UBERON:0009618,1.85e-11,71;UBERON:0007500,2.71e-11,59;UBERON:0001981,2.71e-11,59;UBERON:0004537,2.71e-11,59;UBERON:0006965,2.71e-11,59;UBERON:0003077,3.03e-11,72;UBERON:0007285,3.03e-11,72;UBERON:0007524,3.04e-11,73;UBERON:0003104,1.38e-10,160;UBERON:0009142,1.38e-10,160;UBERON:0005256,1.39e-09,122;UBERON:0001134,1.55e-09,62;UBERON:0002036,1.55e-09,62;UBERON:0003082,1.55e-09,62;UBERON:0002100,3.04e-09,199;UBERON:0004573,4.17e-09,33;UBERON:0004571,4.17e-09,33;UBERON:0002385,1.23e-08,64;UBERON:0001015,1.23e-08,64;UBERON:0000383,1.23e-08,64;UBERON:0001009,5.10e-08,112;UBERON:0004535,5.61e-08,109;UBERON:0002199,6.60e-07,46;UBERON:0002416,6.60e-07,46 | |||
|phase1_expression=104.46506808057,81.1440985546826,103.178623798251,131.096020842601,130.512639572768,115.148685181249,126.649939084155,173.091245318952,154.883077522504,152.355040630935,138.164631258541,243.343688553012,166.700730240383,130.573502372849,182.599954026082,88.7469193316343,109.08770957234,119.040544733142,122.471132496417,168.060244274815,174.828592396325,148.890992702092,94.1716397661177,93.4852323247799,94.9102355336709,93.6828354469882,98.8491096977347,97.7587903915896,30.6824135942145,44.1403807811795,27.8669021968937,142.510289794234,222.591173977127,157.145454320885,131.849175387673,124.966755356444,60.1880900636437,32.6857291033808,33.0898338325734,34.9387501852521,56.8745304569408,68.9893508620426,53.0605669326424,31.2606213376064,33.630958988304,32.2636801379796,37.1886459049095,27.1370806094405,30.3512243477202,21.2892370318391,22.5421421745609,23.8847052187471,26.5454174167196,34.8561729135266,39.2736811123591,30.6835013454446,39.5713917583876,33.4837991823176,30.9144731294612,33.3766188159137,39.6389017995406,26.717955315124,22.1404659960011,20.0325632750366,24.0873668061725,25.5323351111013,37.9921571887301,23.1148772036204,21.3807996552283,21.7188844705117,26.6375781158682,31.6718766949306,23.4182166706254,29.7869953699838,27.8511632954207,33.1260659903234,33.810917975095,40.8481148528897,33.4309220329927,21.3759557805936,24.4667512954881,28.1302796797536,29.9193615584249,46.4217819572812,40.02791642386,61.8758822721435,56.4558341720778,45.4054427564042,52.883589822789,36.2540426723438,38.137268930333,42.8683148240785,32.8754976187697,64.7639510037227,61.655941927969,78.2250731781979,53.8984770111903,49.1263453436456,53.0451867418734,53.8340515157984,28.3552371971224,42.1368547103913,44.8101475338196,55.7052284425868,36.8257384343546,43.1991094438061,50.9111263878229,69.0412213321389,70.6222257250139,81.725638588027,71.2983045887489,51.8747523465744,40.7788048695666,35.8504709640216,38.6781438078414,61.0737357139882,34.8730649177748,37.7990190030893,48.0737414837055,34.7236301613265,41.0182575929544,39.9189858668317,58.7242964403314,58.6178679087236,63.7146705416964,54.9323224742119,46.8042958244997,64.3125510886896,57.2322018976706,57.9297615531196,97.5227465255847,126.091761624284,132.977064317272,118.552041982138,166.945524241751,98.4956328933601,100.206029328439,123.118622186567,92.9277252722787,96.8957466911404,96.5304294767455,99.347628765015,171.218785497495,141.639657143652,70.1022370294116,60.7712783174443,79.5088603902814,126.400030881831,100.671104297303,126.295550452052,147.680468673462,178.068561186968,99.6293239613796,165.635226983735,163.604780121863,120.226584327809,187.050495050445,124.815294678786,117.402866686614,121.83830304634,173.216606356933,128.485985866429,134.234131651493,141.182622852814,136.103847244136,109.481466876282,103.73257015329,104.616065369006,214.643292452237,241.113477530305,152.607052694029,5.27121669744253,3.87780264148325,180.542937587009,125.733903778916,133.595189806132,315.795896239527,206.235530318397,91.1497742249778,167.081924842408,185.743252569687,92.7469982048521,118.571404487311,116.255309996141,119.327189272825,188.288639990295,170.54807364608,161.68178796532,142.657155111456,152.315976352368,100.877859372466,131.409203982373,133.868924992445,141.995765575973,112.897256703956,104.163501080379,91.1333389970251,85.5362057243079,104.841178014108,221.16921095094,127.195411101474,105.210071221291,107.226571530273,96.972440419464,111.500315703733,104.205850571667,99.3073569372605,91.653203993297,212.217939019924,105.283792687554,166.154610509096,225.668504255471,107.483787995692,243.727950883165,118.742554339554,163.88181860627,105.719150599901,265.812764279053,114.602123809663,117.355037250457,208.035621214736,100.651346129413,132.25726200218,97.5967308474649,110.189432718697,92.3510797152592,121.851732423466,126.69845851534,136.876464700293,127.19211450386,127.674350543068,137.596464371588,244.061270434513,120.929296380262,205.821032815196,119.806925432251,140.0446194439,92.5159176311579,92.2158254727216,94.4763237143249,91.543997367887,110.46487815485,105.110884266216,93.5729278631541,102.427604795431,102.34274374774,168.29944365442,164.082875350032,183.562009053804,229.333589761445,82.3907726341901,79.6090045508877,83.301376842078,78.1389685963932,116.839016615958,117.695517864789,126.651829361554,198.951103265987,83.8411629913001,128.697938770356,179.520376225989,211.106761411754,96.7019991569331,111.988771205924,129.149563659404,133.250231283471,105.560696867467,105.971562794671,150.138835612262,154.527509177077,59.8307324792375,78.6254330867839,80.2608276359133,93.733833986777,109.860311842054,113.420077793909,102.544508494761,103.46568211097,190.924574224275,98.5326475791887,105.922266117911,75.2601059413003,74.798255823403,64.6361259143065,113.470737100106,177.624617884599,266.083605166807,174.493894943159,100.56528786385,148.369470574895,117.188837378537,181.876618808175,165.664826156646,100.766804717985,97.4708736813644,89.4141114629706,103.126935811832,136.692191924623,169.532122165527,183.646065223169,194.333310871891,172.641572002432,115.8121748631,136.198022953252,198.400921164165,98.0465914724142,100.57592149414,119.584732812948,103.996585085557,93.2540800702315,92.2750708610387,116.758829415543,118.532673577982,122.283684900158,110.46705838162,140.131561717619,82.7294049236167,104.242540800657,119.381743401773,91.3210912523467,79.8046225233914,56.941889698357,48.0849491936724,46.7168652058284,91.4740647200868,124.934259703317,114.446744291099,101.68237305795,103.346077767812,7.49007023947182,2.99161459204025,7.87389475528467,131.770662106356,119.040584012203,127.765826162575,195.492609838959,174.14669306603,170.476310651683,173.017869944237,168.83076194725,134.170427393031,83.813187746929,150.114985269009,155.423209080656,114.078185796593,184.248889172439,159.904835495859,54.5867588964423,44.0056969669978,54.9646922687738,227.345678584695,179.750274671337,250.983943463635,120.332286792107,212.391371030678,115.351298811993,111.737338150971,114.622423790942,119.03190164627,176.617499069539,115.965689739597,144.357682679572,146.18633770458,127.217335149987,115.04827467536,133.307972899559,121.907933944397,60.2209667640762,111.255200271504,97.4187748835936,138.729631027071,172.358252130631,101.968306326245,153.732554758664,206.056306761098,111.56807173977,206.994759009032,179.448859066724,121.776576681607,109.501349410105,196.978060094381,165.055935598247,151.396506188753,131.310009410738,145.742465324138,231.976949491399,194.246540111501,133.866965310755,178.76798190634,122.342276393778,105.926159973858,83.3282129846925,83.4171044197144,152.180367568986,123.511446746939,130.153983173769,113.974776866412,128.322498056499,141.223380748039,122.536712938748,121.921977925491,128.629807501921,113.948000855327,173.078277297257,84.1300219187379,80.3354481586144,82.5654249839959,58.5703551153634,100.871484197511,259.405373788447,154.742273975653,146.007917003466,235.279265400124,167.027134478414,213.493500407716,165.166119300258,95.2725425560748,93.0155508673054,120.09702217201,161.21560852614,82.1642857025127,229.742745002526,170.333854923233,108.463091922739,122.168978232544,123.938647267662,217.952715136035,285.318578111415,214.420554225641,165.307837551371,79.9380245990613,252.503850748645,126.808417698019,106.619695693099,197.764204085425,186.36148611859,172.494133562717,229.748263872972,238.455520117875,114.781581608161,219.14320711972,164.826100989067,223.948004013132,127.06245805279,106.993205663289,212.575946682825,72.7260181344725,139.964362202351,142.584688651637,247.03703612148,144.173104740933,124.126525415911,162.213150679661,189.470313658701,115.420299752331,161.00900937904,173.525619937654,148.549101434786,107.510551296857,69.5203224648072,88.6979160285155,74.6237815198153,60.0344074153628,59.236167324412,82.3561105214751,60.4835209706689,78.5193924531328,141.541894243902,60.6362308815916,84.783914729437,138.794971818912,116.280985659015,124.996218763164,150.817254001466,140.703456860136,56.6855895591805,78.3192256078367,112.643813275271,110.353290998589,135.11492998765,115.786442976264,52.6332401889141,115.964867794098,98.2799019634641,98.2764574020402,77.9298614973297,76.2581865357798,62.0626343903085,62.8529863177689,59.5651435911513,90.8554643619487,109.135220166935,73.8524393686274,99.5276896791618,80.2703442874746,91.6415533071022,78.9733080522687,77.35631865556,142.355892012179,63.7456158067176,144.625298724464,124.147132063599,88.1985102072937,99.5200674801512,88.4791406512005,75.2581377796243,82.7023678320191,108.440949241208,137.86489150758,105.800681761318,56.085634852823,156.450236417505,166.902489843517,92.6828585121853,106.064499392676,124.467666339048,65.3427287565973,59.853967316544,55.9308109961414,110.162222479592,81.1300028055849,170.602563312758,99.4474012295045,161.687176380967,120.057197860293,65.245159997162,84.8249503258708,128.472803114329,134.754434655166,106.847232159107,147.205420374105,65.0278287844657,91.8476223197116,78.8309833374317,77.1817207202611,68.6617813426875,66.5687144785972,115.559119010837,88.8510858473589,78.4356937336729,99.82740090348,58.020494911863,209.995208926023,174.76743952615,258.950804122193,191.871258814266,286.144040279532,132.083729685485,453.612594391858,118.544225907054,132.177375884611,191.30964586708,153.6306448803,152.144526630566,137.949344494143,153.890277239314,195.650928724846,111.617976135326,113.446801670608,158.032733863146,118.580974578666,101.516716970007,61.301092200814,75.1567078268359,68.7929018539043,100.33391842456,105.988278748037,102.449722130629,113.163448269129,89.2547538213542,139.030549382337,79.2441706674963,122.846872044251,140.472047414383,125.83034469061,89.9853919193641,87.9557188428552,87.9392003574781,133.446702328257,51.1783481984533,78.7760854983687,54.9382607212644,46.5942476114539,34.1531455235751,61.2942054718073,90.2510639342681,84.7634237634367,119.00993539541,100.467834239167,83.9291838461489,161.292804258905,120.889730460551,155.198213830565,60.3271682557969,63.0148744577312,175.361054845693,105.248198128705,153.010251011302,111.870176454038,73.9184226737555,50.8206920394724,76.6296251114276,87.1169897778088,83.2842611150733,93.1182526828894,106.388898674418,56.0373164173902,67.5933793475953,68.1155760042539,62.5159347938625,59.1006081664683,112.402035835227,95.6426452574028,99.0693476371153,61.3336097436129,30.6591811360734,113.028311093449,111.990012922988,55.0186330506341,68.5189667794934,43.7902544991857,134.783325336819,140.786143788795,63.1575224560499,105.142134441727,154.568650039691,100.18651659361,137.240303579184,135.903750470543,129.751821919306,92.5218326238639,118.966031552427,71.5706720828373,75.1842801735897,126.673480990435,144.553947863693,153.712925070798,48.1444127920211,47.9757211825929,121.681361986023,104.320187843372,83.2976326152525,109.682543790281,114.998766469634,75.8385445377934,42.9890041995557,121.498205483472,125.797474369432,111.623888030435,151.496888889286,123.583673241781,111.366289797309,63.4570015281184,133.564531259174,92.8614718730548,137.334254922392,92.47445945087,209.36088448131,76.5355101660379,76.2982112055321,68.4347351537318,63.4333520085005,53.2869188712796,92.7505400088029,85.7474844568695,91.294548013399,112.836241813726,139.452525146126,72.1325621280305,64.1941007975979,54.9010867909713,64.6389166970904,73.771341909706,60.30877296009,108.100317955972,83.2219126631389,79.2458591372144,94.6125172888618,78.870555642702,95.6284605297305,128.387533220822,131.854330400022,93.2642072881134,119.324509421796,64.9333662366954,117.552061357527,144.05150243916,136.418889838603,155.185637738557,195.846469110422,120.649714360232,149.179765739277,121.014326137129,97.2570290686925,152.894463924635,100.723305977642,125.824732641178,127.278116963798,67.0206637123771,117.534058355328,75.4765298270357,107.40005268143,98.6098166824177,106.232129561033,103.959822922081,101.717683301165,257.134004112419,97.9584280227495,95.5909545349697,125.798300828763,77.6053863446518,113.663978415504,108.770084871392,56.7832042028929,49.3106765842697,98.8575736238408,112.227545545041,74.3595435680253,123.16995634028,99.1183653251194,131.988475877056,114.25653544956,126.088328507757,158.136785621564,86.039661068828,105.420082967517,80.4598368366153,107.774266620134,132.786800849516,69.1292180758654,108.147471405861,95.5298201853081,102.71906759267,70.7637273508251,130.259641639471,96.5696403748926,155.190219183426,79.9121055409115,125.372505193074,120.880898109736,67.7509896926774,53.1542129333889,72.7830394238578,91.7002642247183,150.307787086974,96.5612882995204,126.137132111776,92.5042288249437,98.6347629271809,102.990620099231,102.790664907077,186.98655818421,130.910496702081,51.2365278902701,115.677709530544,96.1610798889049,101.289487977117,102.021534954421,61.2994018779461,112.403767603934,130.825210339072,129.669848370409,99.4689977092203,52.8246854958871,127.592034051333,110.891539946876,73.1880108101499,105.590458861409,104.498694158004,37.9697959333055,116.564906160137,102.887729181784,107.71050668768,87.5295692581064,310.883246349448,114.967886092088,74.6673235396078,114.273593174324,77.3267317627709,75.233993926431,110.280093927204,106.660087758553,92.6555625988638,81.3786332558442,66.4793303679366,163.152620095763,252.851266534551,247.841103275273,106.218980741411,91.9755253059242,290.855071763293,82.3923011023822,50.417474774601,111.606301547958,110.892896226964,103.537804614356,127.804880773987,64.599815415973,79.186257317665,73.7115789515265,132.408014473877,88.7462399908534,124.69319053852,134.089996875407,230.857886741514,135.421260553866,85.7121282451717,102.619054685472,138.005965332583,208.788697485901,161.063501202683,110.998658575632,124.721928770016,121.258674972281,108.810471899069,112.949686192217,94.3027412419532,78.3541929961495,79.9766337354215,84.409200909109,114.115177783404,114.594904182257,135.309579436534,235.442329561654,96.1707766257096,136.386707198408,116.784105019723,145.558191111744,131.808077739466,94.2190228508328,101.597993720371,66.987169237696,111.465375857018,48.9129988215984,72.8090515609099,93.0922361051422,69.8858142929205,67.4295328742485,114.539702175101,112.661677038023,68.9841957972125,93.3994796737133,107.136919151524,59.6370154942896,142.922423044855,128.546669436048,93.4830576955542,78.901436745581,66.6529061654249,91.5075060720471,120.276946147728,123.487245366327,84.6442944824641,116.062445668026,97.9812332698607,120.270184270413,132.727078926503,128.933374917161,145.323180660118,100.255019636368,94.862178869274,61.3857928892764,121.593156556802,105.787062712662,169.889258519017,106.133688250724,61.1289005543801,72.7127878282345,110.461896199176,109.026079803178,82.993893013562,144.089443416088,77.3949444662485,116.621618028893,81.4260637134635,122.177288487445,80.2162951403737,71.8656498034617,124.747633704755,92.7183229479,101.924615313218,96.53614114347,77.9682754285174,129.0525183219,91.4366002487841,108.234383431986,60.5838664508816,69.036911201722,89.438609352602 | |||
|short_description=p1@DDB1 | |||
}} |
Latest revision as of 15:29, 18 September 2015
Short description: | p1@DDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450997, ENST00000537120, ENST00000543162, ENST00000543658, NM_001923, uc001nrc.3, uc001nrd.2, uc009ynl.1, uc010rle.1_5end |
EntrezGene: | DDB1 |
HGNC: | 2717 |
UniProt: | B4DG00F5H198Q16531 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.73e-19 | 250 |
mesodermal cell | 3.04e-12 | 121 |
electrically responsive cell | 1.16e-09 | 61 |
electrically active cell | 1.16e-09 | 61 |
muscle cell | 2.32e-09 | 55 |
muscle precursor cell | 6.26e-09 | 58 |
myoblast | 6.26e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.26e-09 | 58 |
vascular associated smooth muscle cell | 8.40e-09 | 32 |
smooth muscle cell | 8.58e-09 | 43 |
smooth muscle myoblast | 8.58e-09 | 43 |
epithelial cell | 5.69e-08 | 253 |
fibroblast | 5.84e-08 | 76 |