FFCP PHASE1:Hg19::chr11:59522812..59522825,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11438 | |||
|TSSclassifier=strong | |||
|UniProt=E7ET77,E9PQJ8 | |||
|association_with_transcript=-23bp_to_ENST00000437946,ENST00000533637_5end | |||
|cluster_id=chr11:59522812..59522825,+ | |||
|description=CAGE_peak_4_at_STX3_5end | |||
|id=chr11:59522812..59522825,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.34e-14!76;CL:0002057!1.61e-14!42;CL:0002009!5.14e-13!65;CL:0000557!9.61e-13!71;CL:0000860!2.07e-12!45;CL:0002194!4.69e-12!63;CL:0000576!4.69e-12!63;CL:0000040!4.69e-12!63;CL:0000559!4.69e-12!63;CL:0000839!3.52e-11!70;CL:0000763!1.44e-09!112;CL:0000049!1.44e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.75e-17;39!CL:0000234;2.75e-17;39!CL:0000860;2.94e-17;33!CL:0002057;2.94e-17;33!CL:0000576;2.83e-11;48!CL:0000766;2.46e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.14e-21,48;CL:0000234,9.14e-21,48;CL:0000766,7.54e-20,72;CL:0002009,5.70e-18,61;CL:0000860,2.26e-17,42;CL:0002057,2.26e-17,42;CL:0000557,5.48e-17,67;CL:0002194,2.19e-16,59;CL:0000576,2.19e-16,59;CL:0000040,2.19e-16,59;CL:0000559,2.19e-16,59;CL:0000839,4.79e-15,66;CL:0000763,1.35e-12,108;CL:0000049,1.35e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.92e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-10!80;UBERON:0001474!2.09e-09!86;UBERON:0004765!4.71e-09!101;UBERON:0001434!4.71e-09!101;UBERON:0002390!6.98e-09!102;UBERON:0003061!6.98e-09!102;UBERON:0000062!1.15e-07!511;UBERON:0002193!2.73e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.56e-15,76;UBERON:0001474,8.79e-14,82;UBERON:0004765,1.66e-13,90;UBERON:0002390,1.45e-12,98;UBERON:0003061,1.45e-12,98;UBERON:0001434,9.84e-11,100;UBERON:0002193,4.52e-10,108;UBERON:0002405,5.94e-10,93;UBERON:0005631,9.84e-07,14;UBERON:0000158,9.84e-07,14 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.563817616383885,1.0007329835313,0.893922188854576,1.74467704820074,0,0.631719873426831,0,0.245733936501509,0,1.52908960491121,3.16520373874144,0.495065411840187,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.458480434487708,0.164201178899891,0,1.57345710739562,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0.387336002901508,0.568676929949686,0.293600439334847,1.10799081706375,1.20326668482085,1.08505435357926,2.46307021663917,0.647787332037959,1.80302897343931,2.03557534291391,1.51150377475524,2.66842467306598,0.697287110717054,0.822335776043652,1.54853185447552,2.01384674625505,1.5369642391746,0.945928919554341,2.75796544589295,5.16387746867061,4.06279459783025,1.88242339542605,1.36453075028923,2.02251136000576,0.918251677112708,2.24650318953266,3.19668562899521,0.989553900560148,4.18873681005427,1.27867425159808,1.7412554317715,3.40431134814684,3.11411124497787,2.76373531782418,2.08593167368081,1.08594422352558,1.81619850790011,2.20966581592539,2.53169909952708,0.633765858935825,1.27562579979026,0.628975936525128,1.34794357375794,1.95229960693958,1.12507910687956,0.570025487482497,0.19891667719909,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0,0.128091319725675,0.390178042679635,0.986627427622057,0.552700035571697,1.15921234294021,0.14828656316206,0.267540828089713,1.04535523804977,0.679856056185397,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0.710331756132051,0,0,0.267440195783507,0,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.579386075843295,0.795285947051099,0.486634870302636,0.378139268656271,0.221729397462564,0.263504357079378,0.589405839739707,0.364295288292542,0.370784442784429,0.324547393654683,0.522389211897802,0.531831842075461,0.238490624305342,1.14398982156026,0.74291500265913,0.993812036833525,0,2.42998351125316,0.56530794192401,0,0,1.04497483268405,0.516833518338658,0,0.66944122552934,1.20848795132744,0,0.488124115096339,0.367663080345869,0,0.625098097988558,0.898117490504679,0.563057402416611,0,0.949265659568129,0,5.27121669744253,7.75560528296651,0.436094052142534,0.496971951695318,0.506522046658319,1.19168262731897,0.286836620748814,1.06400514659507,0.560677600142307,0,0.98667019366864,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0.936480230490962,1.1409436430889,0.747243402759005,0.352303495931295,0.647491777472526,0.702254033511242,0.204154171254893,0.491337269247072,0.929932030581889,0,0.247266929278557,0,0.718618141816238,0.673344455816265,0.375355559615893,0.554128230968366,0,0.30648779579902,0.600952235626387,0,0,0.640672166455702,0,0.600182192168805,0.721367704669072,0.257640540045629,0.18611685633159,0.675105328965065,0.584622030967192,1.00973509697646,0.276149695926898,0.484938170456436,0.355009592516614,0.403008392910561,0.339121184620975,1.54608682530637,0.272746120590835,2.58124135850103,2.92736894711029,1.59035721985782,2.5562667431294,2.07322110030741,2.27088765788066,1.45990943630332,0,0,0,0.464367928031979,0,0.354920400119532,0,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,2.21379189377604,0.686271241194102,0.658501712451753,3.37205259772859,0.603173834469785,0.0925884451585296,0,1.03993478527958,0,0.34779121492523,0.352226082707465,0,0,0.570762456703795,3.1608175918371,0.858486162094873,3.20082107913617,1.63802985597466,2.52672975890838,2.81201501960331,1.17587489739202,0.567100388969546,0.626909658919938,0.290633938513962,1.15014803749563,0.985326475791887,1.14462964217194,0.207328115540772,0.864719720501769,1.38866676769018,0.761974731506028,0.763976851116555,0,0,0.616964956219941,0,0.285826432630578,0.336393253036082,0,0.22001485746285,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0,1.41849132023278,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0.871533458600294,0.699810938274399,0,1.50677127429638,4.21667878966063,0.479249710983165,0,0,0.579125226670317,0.821905290201534,0.716243852959582,0.224170287987055,0,0.431255149719035,0.641715181398742,0,0,0,0.167516265334349,0,4.49404214368309,8.97484377612075,3.72973962092432,0.36807447515742,1.00034104211935,0.813795071099207,1.24782516918484,1.07057393278297,1.26161932027148,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0.434418072340414,0.195801157462741,0.686286847621712,0.413536052245775,0.862856803274467,0.640365346820666,1.81876542867756,0,1.5119514666484,0.248107807818777,0.61384789315225,0.280660094433074,1.02511319404561,0.511707249066704,0.64341568457443,1.484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|short_description=p4@STX3 | |||
}} |
Latest revision as of 12:41, 18 September 2015
Short description: | p4@STX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000437946, ENST00000533637_5end |
EntrezGene: | STX3 |
HGNC: | 11438 |
UniProt: | E7ET77E9PQJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.14e-21 | 48 |
phagocyte | 9.14e-21 | 48 |
myeloid leukocyte | 7.54e-20 | 72 |
macrophage dendritic cell progenitor | 5.70e-18 | 61 |
classical monocyte | 2.26e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.26e-17 | 42 |
granulocyte monocyte progenitor cell | 5.48e-17 | 67 |
monopoietic cell | 2.19e-16 | 59 |
monocyte | 2.19e-16 | 59 |
monoblast | 2.19e-16 | 59 |
promonocyte | 2.19e-16 | 59 |
myeloid lineage restricted progenitor cell | 4.79e-15 | 66 |
myeloid cell | 1.35e-12 | 108 |
common myeloid progenitor | 1.35e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.56e-15 | 76 |
bone element | 8.79e-14 | 82 |
skeletal element | 1.66e-13 | 90 |
hematopoietic system | 1.45e-12 | 98 |
blood island | 1.45e-12 | 98 |
skeletal system | 9.84e-11 | 100 |
hemolymphoid system | 4.52e-10 | 108 |
immune system | 5.94e-10 | 93 |
extraembryonic membrane | 9.84e-07 | 14 |
membranous layer | 9.84e-07 | 14 |