FFCP PHASE1:Hg19::chr11:58979630..58979649,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29619 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-57bp_to_AK095457_5end | |||
|cluster_id=chr11:58979630..58979649,- | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_6_at_MPEG1_5end | |||
|id=chr11:58979630..58979649,- | |||
|ontology_enrichment_celltype=CL:0002057!3.31e-77!42;CL:0002009!2.80e-76!65;CL:0002194!4.83e-76!63;CL:0000576!4.83e-76!63;CL:0000040!4.83e-76!63;CL:0000559!4.83e-76!63;CL:0000860!3.43e-71!45;CL:0000766!7.65e-69!76;CL:0000557!1.32e-68!71;CL:0000839!5.21e-67!70;CL:0000738!3.15e-55!140;CL:0002087!5.96e-55!119;CL:0002031!2.41e-46!124;CL:0000763!1.94e-45!112;CL:0000049!1.94e-45!112;CL:0000037!4.84e-43!172;CL:0000566!4.84e-43!172;CL:0000988!1.18e-39!182;CL:0002032!1.03e-37!165;CL:0000837!1.03e-37!165;CL:0002393!2.16e-17!9;CL:0002397!2.16e-17!9;CL:0000134!1.43e-12!358;CL:0002320!5.41e-12!365;CL:0000219!5.64e-10!390;CL:0000048!4.06e-08!430;CL:0000034!8.08e-08!444;CL:0000723!8.91e-08!436;CL:0000235!1.67e-07!10;CL:0000784!2.07e-07!3;CL:0002619!8.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-87;33!CL:0002057;2.92e-87;33!CL:0000473;3.70e-77;39!CL:0000234;3.70e-77;39!CL:0000576;1.01e-54;48!CL:0000766;1.43e-32;69!CL:0000763;2.55e-16;100!CL:0002087;3.25e-13;104!CL:0000738;2.28e-10;136!CL:0000235;7.45e-09;6!CL:0002393;4.18e-08;6!CL:0002397;4.18e-08;6!CL:0000784;7.25e-08;3!CL:0000988;3.90e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.03e-98,48;CL:0000234,4.03e-98,48;CL:0000860,8.77e-91,42;CL:0002057,8.77e-91,42;CL:0002194,6.95e-88,59;CL:0000576,6.95e-88,59;CL:0000040,6.95e-88,59;CL:0000559,6.95e-88,59;CL:0002009,7.66e-85,61;CL:0000839,4.96e-78,66;CL:0000557,8.67e-77,67;CL:0000766,4.36e-71,72;CL:0000763,1.86e-45,108;CL:0000049,1.86e-45,108;CL:0002087,3.34e-45,115;CL:0002031,4.63e-43,120;CL:0000738,7.45e-40,136;CL:0000037,5.00e-31,168;CL:0002032,1.80e-30,161;CL:0000837,1.80e-30,161;CL:0000988,4.09e-29,177;CL:0000134,3.84e-11,354;CL:0002320,8.64e-11,361;CL:0000219,1.50e-09,386;CL:0000235,7.18e-09,6;CL:0000048,4.93e-08,427;CL:0000784,6.21e-08,3;CL:0000723,8.00e-08,433;CL:0000034,1.49e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.25e-66;42!CL:0000049;1.66e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.54e-68!102;UBERON:0003061!7.54e-68!102;UBERON:0002193!2.41e-62!112;UBERON:0002371!3.08e-59!80;UBERON:0001474!4.49e-54!86;UBERON:0004765!7.68e-44!101;UBERON:0001434!7.68e-44!101;UBERON:0002405!1.28e-43!115;UBERON:0003081!3.65e-27!216;UBERON:0002204!6.74e-23!167;UBERON:0002384!3.30e-11!375;UBERON:0000926!1.93e-08!448;UBERON:0004120!1.93e-08!448;UBERON:0006603!1.93e-08!448;UBERON:0000178!7.86e-08!15;UBERON:0000179!7.86e-08!15;UBERON:0000463!7.86e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.66e-67,76;UBERON:0002390,5.36e-65,98;UBERON:0003061,5.36e-65,98;UBERON:0001474,9.66e-62,82;UBERON:0002193,2.03e-58,108;UBERON:0002405,2.91e-57,93;UBERON:0004765,9.65e-56,90;UBERON:0001434,1.41e-49,100;UBERON:0003081,4.94e-28,203;UBERON:0002204,3.58e-27,167;UBERON:0000926,1.30e-15,315;UBERON:0004120,1.30e-15,315;UBERON:0006603,1.30e-15,315;UBERON:0002384,2.61e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.40381113229099,0.434021741431704,0.447830948479849,0.32389366601898,1.03030227053675,3.78035420826868,1.88937971844405,1.4555043671269,1.62700325833979,2.05583944010913,3.40677007984614,3.16461631554365,1.7931249457037,1.41889337933151,1.03423704220986,0,1.35426486594342,3.9530891303947,0.818718450173537,0.898893937780338,3.36692281607993,0.962787081228281,0.639337125799041,1.9791078011203,1.79517291859469,1.70489900213078,2.90209238628584,2.26954089876456,1.86846674698672,3.51748131359441,2.08593167368081,1.52032191293582,4.23779651843358,0,0.632924774881769,0.633765858935825,1.70083439972035,0.419317291016752,1.46027220490444,1.50176892841506,0.803627933485401,0.285012743741249,0.79566670879636,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0,1.52909291250092,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,2.28797964312051,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,6.02708509718552,14.7583757638122,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.12780701575824,0.322289439867886,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p6@MPEG1 | |||
}} |
Latest revision as of 12:11, 18 September 2015
Short description: | p6@MPEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MPEG1_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | -57bp_to_AK095457_5end |
EntrezGene: | MPEG1 |
HGNC: | 29619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.03e-98 | 48 |
phagocyte | 4.03e-98 | 48 |
classical monocyte | 8.77e-91 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.77e-91 | 42 |
monopoietic cell | 6.95e-88 | 59 |
monocyte | 6.95e-88 | 59 |
monoblast | 6.95e-88 | 59 |
promonocyte | 6.95e-88 | 59 |
macrophage dendritic cell progenitor | 7.66e-85 | 61 |
myeloid lineage restricted progenitor cell | 4.96e-78 | 66 |
granulocyte monocyte progenitor cell | 8.67e-77 | 67 |
myeloid leukocyte | 4.36e-71 | 72 |
myeloid cell | 1.86e-45 | 108 |
common myeloid progenitor | 1.86e-45 | 108 |
nongranular leukocyte | 3.34e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 4.63e-43 | 120 |
leukocyte | 7.45e-40 | 136 |
hematopoietic stem cell | 5.00e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.80e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-30 | 161 |
hematopoietic cell | 4.09e-29 | 177 |
mesenchymal cell | 3.84e-11 | 354 |
connective tissue cell | 8.64e-11 | 361 |
motile cell | 1.50e-09 | 386 |
macrophage | 7.18e-09 | 6 |
multi fate stem cell | 4.93e-08 | 427 |
plasmacytoid dendritic cell | 6.21e-08 | 3 |
somatic stem cell | 8.00e-08 | 433 |
stem cell | 1.49e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.66e-67 | 76 |
hematopoietic system | 5.36e-65 | 98 |
blood island | 5.36e-65 | 98 |
bone element | 9.66e-62 | 82 |
hemolymphoid system | 2.03e-58 | 108 |
immune system | 2.91e-57 | 93 |
skeletal element | 9.65e-56 | 90 |
skeletal system | 1.41e-49 | 100 |
lateral plate mesoderm | 4.94e-28 | 203 |
musculoskeletal system | 3.58e-27 | 167 |
mesoderm | 1.30e-15 | 315 |
mesoderm-derived structure | 1.30e-15 | 315 |
presumptive mesoderm | 1.30e-15 | 315 |
connective tissue | 2.61e-10 | 371 |