FFCP PHASE1:Hg19::chr11:5710850..5710888,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYM9 | |||
|association_with_transcript=-30bp_to_ENST00000379965,uc001mbr.2,uc009yes.2,uc009yet.1,uc010qzm.1_5end | |||
|cluster_id=chr11:5710850..5710888,+ | |||
|description=CAGE_peak_2_at_TRIM22_5end | |||
|id=chr11:5710850..5710888,+ | |||
|ontology_enrichment_celltype=CL:0000144!9.72e-16!625;CL:0002371!2.16e-15!591;CL:0000048!5.36e-14!430;CL:0000723!6.77e-14!436;CL:0000034!1.02e-13!444;CL:0000003!2.67e-11!722;CL:0000192!2.07e-09!42;CL:0000514!2.07e-09!42;CL:0000542!2.18e-09!53;CL:0000051!2.18e-09!53;CL:0000838!2.40e-09!52;CL:0000359!8.19e-09!32;CL:0000134!3.56e-08!358;CL:0000055!5.85e-08!180;CL:0000945!3.26e-07!24;CL:0000826!3.26e-07!24;CL:0002320!3.57e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.70e-09;32!CL:0000945;2.04e-07;24!CL:0000192;5.48e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.64e-15,433;CL:0000048,6.62e-15,427;CL:0000034,8.76e-15,441;CL:0000192,1.30e-09,43;CL:0000514,1.30e-09,43;CL:0000542,1.40e-09,53;CL:0000051,1.40e-09,53;CL:0000838,1.56e-09,52;CL:0000359,2.62e-09,32;CL:0000134,4.56e-09,354;CL:0002320,5.91e-08,361;CL:0000057,7.38e-08,76;CL:0000945,2.08e-07,24;CL:0000826,2.08e-07,24;CL:0000219,2.37e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;5.48e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.45e-07!110;UBERON:0001637!5.46e-07!42;UBERON:0003509!5.46e-07!42;UBERON:0004572!5.46e-07!42;UBERON:0002049!8.13e-07!79;UBERON:0007798!8.13e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.08e-07,371;UBERON:0001637,7.69e-07,42;UBERON:0003509,7.69e-07,42;UBERON:0004572,7.69e-07,42;UBERON:0004535,9.31e-07,109 | |||
|phase1_expression=16.7144108928912,8.56402095563933,26.4994279700426,17.0124607200322,11.6209884551095,20.9361245784089,0,1.89515962028049,0.522371256399677,1.96587149201207,0.697801167972428,0,0.527533956456907,0.37129905888014,0,20.1697543935533,24.7104756489831,34.3245742482065,23.9087071407348,0.61560529038394,1.22400414746552,0.626909442956176,6.29719171688325,3.83248390204076,4.2684497462233,13.9072398461271,9.44156778674376,10.8620878212877,1.96682138424452,4.98978217526377,1.23852898652861,0.919421224478927,1.204823675113,3.32778609150109,32.6911586448873,4.26507697462265,12.9184193307333,2.76997704265939,1.40381113229099,1.95309783644267,1.56740831967947,1.29557466407592,0.515151135268373,0.581592955118259,0.755751887377619,0.970336244751265,0.232429036905685,0.411167888021826,0.929119112685311,4.89077066947656,1.5369642391746,4.49316236788312,0.689491361473237,1.29096936716765,0,0.564727018627814,0.545812300115692,1.34834090667051,2.75475503133812,2.24650318953266,1.91801137739712,1.9791078011203,3.98927315243264,2.98357325372886,2.61188314765726,0.56738522469114,1.24564449799115,1.25624332628372,2.08593167368081,2.82345498116652,3.02699751316684,4.05105399586321,2.21523671208619,3.16882929467913,1.91343869968539,1.67726916406701,1.34794357375794,1.65194582125657,1.12507910687956,3.42015292489498,4.37616689837998,4.38393969035121,14.0796995569058,12.561188059029,12.4531295540898,11.5217160092957,6.80673177961221,11.4950487990897,6.61044872784862,12.4026988089597,8.53819453664173,9.98303221930596,4.96955196562797,17.1822727152734,10.0891541336676,4.74091352595139,4.52432471261816,5.89516144123747,5.14003747498773,11.8702411727381,12.3850461320764,15.1503297835115,23.3792074089494,12.4779711711394,10.0166008541445,11.5197625183483,20.8518975099062,12.8091319725675,10.4047478047903,7.89301942097645,8.0141505157896,15.3595635439578,13.9389369372337,13.6445822325754,14.6349733326968,7.3651072753418,6.13152789763074,6.52892146416997,9.36172860472161,9.2383970153988,13.6727525309848,12.3558765778289,9.937957859133,14.4624870604493,9.99445812418767,13.496303366509,9.85353596305256,7.66105624253983,3.20928234940209,5.35850294366356,0,0,2.17366355134002,6.86734389530676,7.52006865953834,2.17269778441236,0.795285947051099,0.973269740605272,5.76662384700814,11.0864698731282,5.09441757020131,1.17881167947941,1.45718115317017,1.11235332835329,0.324547393654683,0.870648686496336,1.32957960518865,0.476981248610684,0.571994910780128,0.371457501329565,1.98762407366705,0.860234595106124,2.42998351125316,0.56530794192401,0.419499436209906,1.6507082516404,1.04497483268405,6.20200222006389,7.1153252537342,4.35136796594071,1.61131726843659,0.760272105718513,0.732186172644509,3.30896772311282,2.43042584364528,4.73288559905623,2.91888184414021,1.80178368773316,4.5994991239765,1.89853131913626,0.549605231791222,0,0,0.436094052142534,8.44852317882041,12.0298986081351,33.6319319265576,15.2023408996871,2.12801029319014,3.92474320099615,10.6748995729705,3.45334567784024,1.55605517699883,2.42479209725439,1.47115712802113,1.66493170409425,2.30470369792,0,3.1216007683032,2.2818872861778,5.82849854152024,0.117434498643765,0,0,5.30800845262722,0.245668634623536,3.09977343527296,5.94001428641027,3.95627086845691,1.82032272387605,0,1.34668891163253,0,7.75779523355712,5.70670907145089,7.96868269077451,3.30523729594513,6.57906662328122,14.5305604907978,19.8608371601268,12.9278459707333,11.7035527472917,13.4998813302355,24.7334918443804,14.3309979375324,13.33333024706,8.96420447483027,12.8741224864498,23.0124746605748,7.75901072730297,17.0404604407975,9.97445772453639,11.6996808694236,8.69673839234836,13.0918137883601,6.59650569394709,0.121973706129595,0.265059536642971,0,0.310983165046111,1.00928340350251,0.36497735907583,3.12899064659632,7.07565032012174,1.38134921352481,7.42988684851167,6.49691533502627,0.354920400119532,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0.860919069801795,9.26466175612038,7.68251997860379,2.24803506515239,2.11110842064425,5.83307204498736,0.325808305310325,0,8.6598805215164,4.521285794028,19.4898432431464,1.15493158208859,0.925971025153221,0.570762456703795,0,0,1.47730203652438,1.17002132569619,2.22946743433092,16.8720901176199,46.0271031264875,20.8409392946308,2.32852159027406,1.45316969256981,3.4504441124869,36.9497428421958,25.5340458638356,2.48793738648926,7.49423757768199,7.82703087243556,0.126995788584338,0,0,1.71072446022705,0.308482478109971,8.10926256178577,8.00314011365619,0.448524337381443,0.43596006883328,0.36669142910475,52.3550448819,3.57656445851882,0.845302752556,22.3388017931291,4.16029747645464,0.257207374262142,0,0,3.43147184779554,0.542621605391443,1.64648067356154,1.30294473717494,3.909311436168,3.16780749173372,16.5791657382772,10.4584015032035,14.2961377390342,0,1.00451418286425,0,5.27174682081482,1.14861935834114,4.27910715122155,3.90909528002464,2.87666851570537,4.65558504423729,0.448340575974109,8.47232268868287,5.39068937148793,3.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| |||
|short_description=p2@TRIM22 | |||
}} |
Latest revision as of 09:01, 18 September 2015
Short description: | p2@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000379965, uc001mbr.2, uc009yes.2, uc009yet.1, uc010qzm.1_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | Q8IYM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.64e-15 | 433 |
multi fate stem cell | 6.62e-15 | 427 |
stem cell | 8.76e-15 | 441 |
smooth muscle cell | 1.30e-09 | 43 |
smooth muscle myoblast | 1.30e-09 | 43 |
lymphocyte | 1.40e-09 | 53 |
common lymphoid progenitor | 1.40e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.56e-09 | 52 |
vascular associated smooth muscle cell | 2.62e-09 | 32 |
mesenchymal cell | 4.56e-09 | 354 |
connective tissue cell | 5.91e-08 | 361 |
fibroblast | 7.38e-08 | 76 |
lymphocyte of B lineage | 2.08e-07 | 24 |
pro-B cell | 2.08e-07 | 24 |
motile cell | 2.37e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.08e-07 | 371 |
artery | 7.69e-07 | 42 |
arterial blood vessel | 7.69e-07 | 42 |
arterial system | 7.69e-07 | 42 |
cardiovascular system | 9.31e-07 | 109 |