FFCP PHASE1:Hg19::chr11:504489..504498,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10074 | |||
|TSSclassifier=strong | |||
|UniProt=E9PLZ3 | |||
|association_with_transcript=53bp_to_ENST00000529368_5end | |||
|cluster_id=chr11:504489..504498,- | |||
|description=CAGE_peak_7_at_RNH1_5end | |||
|id=chr11:504489..504498,- | |||
|ontology_enrichment_celltype=CL:0000048!4.38e-23!430;CL:0000723!6.96e-22!436;CL:0000034!2.46e-20!444;CL:0000055!4.88e-18!180;CL:0002371!3.91e-16!591;CL:0000144!6.29e-15!625;CL:0002320!7.65e-15!365;CL:0000057!2.28e-13!75;CL:0000222!5.85e-13!119;CL:0000134!6.10e-13!358;CL:0000183!1.55e-11!59;CL:0000680!3.93e-11!57;CL:0000056!3.93e-11!57;CL:0000355!3.93e-11!57;CL:0000187!3.19e-10!54;CL:0000192!3.46e-10!42;CL:0000514!3.46e-10!42;CL:0000219!1.09e-09!390;CL:0000557!1.56e-08!71;CL:0000393!2.69e-08!60;CL:0000211!2.69e-08!60;CL:0000359!6.52e-08!32;CL:0002194!7.68e-08!63;CL:0000576!7.68e-08!63;CL:0000040!7.68e-08!63;CL:0000559!7.68e-08!63;CL:0000839!8.89e-08!70;CL:0002009!1.53e-07!65;CL:0002334!1.69e-07!12;CL:0000548!5.56e-07!679;CL:0000004!5.56e-07!679;CL:0000255!5.56e-07!679;CL:0000012!8.02e-07!682;CL:0000766!8.88e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000134;9.18e-09;55!CL:0000048;2.73e-08;58!CL:0002570;5.97e-08;8!CL:0002334;7.72e-08;12!CL:0000723;4.81e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.04e-13,427;CL:0000723,3.50e-13,433;CL:0000034,1.66e-12,441;CL:0002320,3.39e-10,361;CL:0000134,2.64e-09,354;CL:0000222,6.03e-09,121;CL:0000057,1.44e-08,76;CL:0002570,6.37e-08,8;CL:0002334,8.83e-08,12;CL:0000219,6.28e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.47e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.46e-18!167;UBERON:0003081!4.17e-17!216;UBERON:0002384!4.84e-14!375;UBERON:0004872!3.02e-13!84;UBERON:0000926!9.29e-12!448;UBERON:0004120!9.29e-12!448;UBERON:0006603!9.29e-12!448;UBERON:0001637!2.98e-11!42;UBERON:0003509!2.98e-11!42;UBERON:0004572!2.98e-11!42;UBERON:0000914!3.77e-11!83;UBERON:0002329!3.77e-11!83;UBERON:0003077!3.77e-11!83;UBERON:0003059!3.77e-11!83;UBERON:0007282!3.77e-11!83;UBERON:0009618!3.77e-11!83;UBERON:0007285!3.77e-11!83;UBERON:0004290!5.10e-11!70;UBERON:0001981!3.73e-10!60;UBERON:0007500!3.73e-10!60;UBERON:0004537!3.73e-10!60;UBERON:0006965!3.73e-10!60;UBERON:0000486!1.12e-09!82;UBERON:0004535!1.50e-09!110;UBERON:0000055!1.75e-09!69;UBERON:0001134!2.64e-09!61;UBERON:0002036!2.64e-09!61;UBERON:0003082!2.64e-09!61;UBERON:0002371!4.32e-09!80;UBERON:0004765!4.81e-09!101;UBERON:0001434!4.81e-09!101;UBERON:0004573!5.70e-09!33;UBERON:0004571!5.70e-09!33;UBERON:0002385!7.68e-09!63;UBERON:0001015!7.68e-09!63;UBERON:0000383!7.68e-09!63;UBERON:0002049!9.01e-09!79;UBERON:0007798!9.01e-09!79;UBERON:0001009!1.08e-08!113;UBERON:0000948!6.79e-08!24;UBERON:0005498!6.79e-08!24;UBERON:0004140!6.79e-08!24;UBERON:0009881!6.79e-08!24;UBERON:0004141!6.79e-08!24;UBERON:0003084!6.79e-08!24;UBERON:0007005!6.79e-08!24;UBERON:0004139!6.79e-08!24;UBERON:0004291!6.79e-08!24;UBERON:0001474!8.03e-08!86;UBERON:0003914!4.01e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.24e-07;33!UBERON:0004571;3.24e-07;33!UBERON:0001013;6.05e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.95e-12,315;UBERON:0004120,3.95e-12,315;UBERON:0006603,3.95e-12,315;UBERON:0002384,2.12e-09,371;UBERON:0002204,5.66e-09,167;UBERON:0003081,8.80e-09,203;UBERON:0004573,1.14e-07,33;UBERON:0004571,1.14e-07,33;UBERON:0004872,1.39e-07,83;UBERON:0001637,2.70e-07,42;UBERON:0003509,2.70e-07,42;UBERON:0004572,2.70e-07,42;UBERON:0001013,6.59e-07,14 | |||
|phase1_expression=1.45342703416445,0.214100523890983,0.986680828671798,2.00146596706261,0.893922188854576,0.872338524100369,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0,0.866364470720326,1.32558950291166,0.672325146451775,0,0,0.487932798790507,0,0.408001382488506,0.626909442956176,0,0,0.125542639594803,0.229240217243854,0.164201178899891,0.0787107813136792,0.393364276848904,0,0.309632246632152,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,1.79132379391939,1.94336199611388,1.54545340580512,0.581592955118259,0.377875943688809,0,0.697287110717054,0.822335776043652,0.619412741790207,0.575384784644301,0,0,1.03423704220986,0.645484683583826,0,1.69418105588344,0.818718450173537,0.224723484445085,0.612167784741805,0,0,0.989553900560148,0.199463657621632,0.852449501065388,0.870627715885752,0,0.622822248995575,1.00499466102697,0,0.217188844705117,1.21079900526674,0,0,1.47878700418359,0.425208599930087,0.419317291016752,0.336985893439485,0.450530678524519,0.32145117339416,0.855038231223746,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0.722878304769133,0.50133791063589,1.01392563272577,0,0.973269740605272,0.0945348171640679,0,0,0.196468613246569,0,0,2.92092654289215,3.13433527138681,2.6591592103773,0,0,0,1.39133685156694,0.860234595106124,0.347140501607594,1.69592382577203,1.67799774483962,0.275118041940067,0.835979866147242,0.516833518338658,0,0,2.41697590265488,0.760272105718513,1.95249646038536,0,0,0,0.22452937262617,0.675668882899933,0,0,0.183201743930407,0,0,0,0.993943903390637,0.633152558322899,1.19168262731897,1.14734648299525,2.4826786753885,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,1.34710672069688,0.653847612453835,0.302714855289863,0,0.468642863667593,0.936480230490962,2.85235910772225,2.09228152772521,0,0.323745888736263,0.280901613404497,0.61246251376468,0.245668634623536,1.44656093646072,2.37600571456411,1.97813543422845,0,4.31170885089743,0.336672227908132,0.125118519871964,0.277064115484183,0,1.22595118319608,2.40380894250555,0.567160915800105,0,0,1.05965950579781,0.900273288253207,0.824420233907511,0.772921620136887,0.558350568994769,0.337552664482532,1.07180705677318,1.00973509697646,0.828449087780694,0.161646056818812,0.355009592516614,0.705264687593482,0.169560592310488,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0,0,0,0,3.12899064659632,0,2.76269842704961,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.738651018262192,3.7440682422278,2.37809859661965,0,0.16798212819886,0,0,0,0,0,0.792435906119034,0.621984346622316,0.576479813667846,0.88369703398466,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0.517086863031111,14.3062578340753,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.57191197463259,1.08524321078289,0,0.977208552881205,0.355391948742546,1.58390374586686,1.50719688529793,4.35766729300147,2.69927076191554,2.43247561282381,0.502257091432126,0,2.39624855491583,0,0,1.01346914667305,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,1.00034104211935,0.813795071099207,0.415941723061614,0.356857977594324,0,0.585707074963566,0.601892199455438,9.09630016223939,3.10419213877515,0.664225598535437,0.553107505625109,0.0868836144680828,0.783204629850962,1.37257369524342,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,1.48864684691266,0.920771839728375,1.68396056659844,0.768834895534206,1.02341449813341,0.64341568457443,1.48418066444991,0.925258162815933,1.59805552781814,1.06765302817952,2.59627214591811,3.02146983995894,0,0,0,0.229628896329213,0.364182336013434,0.917870904715969,0,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.431831832204279,0,0.541892875087706,1.00337954770971,0.254876273045038,0,0.895499018888713,0,0,0,0.656029291399411,0,0,0,0.082509499920588,0,0,3.21367859688319,0.290012154876366,1.07834031980251,1.07452572308291,0.964856007391714,0.214840489736547,0.725083469571143,0,0.356128142586949,0.330569830721956,0.384380134730212,0,0.4046311234222,2.78907329578371,0.62962469366128,0,0.924100740528266,0.532306030317022,2.60979897622522,1.11194531462352,0.858749320451947,0,0.632758849437452,0.953150969619124,1.02359116524534,1.71175595213568,0.318203247925937,2.35484592059769,0.899362287916574,0.823611089208164,0.117812402345686,0.808729926293264,1.58510321173008,1.68503382495592,0.48763373908959,0.974853958525138,1.05650146756755,0.818999468447914,0.707027159768564,3.39024349860728,1.10273068709225,1.32687795048244,1.31535265576129,1.73632660280006,0,0.202910376962704,0.61964699619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| |||
|short_description=p7@RNH1 | |||
}} |
Latest revision as of 07:05, 18 September 2015
Short description: | p7@RNH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RNH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000529368_5end |
EntrezGene: | RNH1 |
HGNC: | 10074 |
UniProt: | E9PLZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.04e-13 | 427 |
somatic stem cell | 3.50e-13 | 433 |
stem cell | 1.66e-12 | 441 |
connective tissue cell | 3.39e-10 | 361 |
mesenchymal cell | 2.64e-09 | 354 |
mesodermal cell | 6.03e-09 | 121 |
fibroblast | 1.44e-08 | 76 |
mesenchymal stem cell of adipose | 6.37e-08 | 8 |
preadipocyte | 8.83e-08 | 12 |
motile cell | 6.28e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.95e-12 | 315 |
mesoderm-derived structure | 3.95e-12 | 315 |
presumptive mesoderm | 3.95e-12 | 315 |
connective tissue | 2.12e-09 | 371 |
musculoskeletal system | 5.66e-09 | 167 |
lateral plate mesoderm | 8.80e-09 | 203 |
systemic artery | 1.14e-07 | 33 |
systemic arterial system | 1.14e-07 | 33 |
splanchnic layer of lateral plate mesoderm | 1.39e-07 | 83 |
artery | 2.70e-07 | 42 |
arterial blood vessel | 2.70e-07 | 42 |
arterial system | 2.70e-07 | 42 |
adipose tissue | 6.59e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.11e-07 | 14 |