FFCP PHASE1:Hg19::chr11:47470682..47470693,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9863 | |||
|TSSclassifier=strong | |||
|UniProt=E9PK11 | |||
|association_with_transcript=0bp_to_ENST00000529341_5end | |||
|cluster_id=chr11:47470682..47470693,- | |||
|coexpression_cluster_id=C737 | |||
|description=CAGE_peak_1_at_RAPSN_5end | |||
|id=chr11:47470682..47470693,- | |||
|ontology_enrichment_celltype=CL:0000188!5.42e-24!9;CL:0000515!6.03e-12!4;CL:0000594!9.82e-09!3;CL:0000680!2.65e-07!57;CL:0000056!2.65e-07!57;CL:0000355!2.65e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.70e-32;9!CL:0000680;8.49e-31;7!CL:0000056;8.68e-25;4!CL:0000515;5.27e-19;3!CL:0000594;5.85e-09;3!CL:0002590;1.09e-08;3!CL:0000228;1.61e-07;1!CL:0002372;1.61e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.66e-32,9;CL:0000515,8.42e-25,4;CL:0000680,1.02e-12,58;CL:0000056,1.02e-12,58;CL:0000355,1.02e-12,58;CL:0000594,6.22e-09,3;CL:0002590,1.13e-08,3;CL:0000228,1.61e-07,1;CL:0002372,1.61e-07,1;CL:0000187,1.88e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000515;8.68e-25;4!CL:0000355;3.45e-08;58!UBERON:0004874;1.95e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.57e-14!115;UBERON:0001134!1.05e-11!61;UBERON:0002036!1.05e-11!61;UBERON:0003082!1.05e-11!61;UBERON:0002385!3.55e-11!63;UBERON:0001015!3.55e-11!63;UBERON:0000383!3.55e-11!63;UBERON:0004290!1.44e-09!70;UBERON:0000481!1.17e-08!347;UBERON:0000914!3.21e-08!83;UBERON:0002329!3.21e-08!83;UBERON:0003077!3.21e-08!83;UBERON:0003059!3.21e-08!83;UBERON:0007282!3.21e-08!83;UBERON:0009618!3.21e-08!83;UBERON:0007285!3.21e-08!83;UBERON:0000475!1.01e-07!365;UBERON:0000486!1.75e-07!82;UBERON:0000490!2.84e-07!138;UBERON:0003104!3.63e-07!238;UBERON:0009142!3.63e-07!238;UBERON:0001630!5.33e-07!2;UBERON:0005090!5.33e-07!2;UBERON:0000483!6.66e-07!309;UBERON:0000341!8.59e-07!2;UBERON:0000119!9.74e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.10e-73;16!UBERON:0002036;7.10e-73;16!UBERON:0002385;5.88e-36;31!UBERON:0001015;5.88e-36;31!UBERON:0000383;5.88e-36;31!UBERON:0005090;9.74e-14;2!UBERON:0001630;9.74e-14;2!UBERON:0000341;2.73e-13;2!UBERON:0001723;2.24e-09;3!UBERON:0001033;2.24e-09;3!UBERON:0002426;9.71e-08;1!UBERON:0003831;9.71e-08;1!UBERON:0003898;9.71e-08;1!UBERON:0004830;9.71e-08;1!UBERON:0003830;9.71e-08;1!UBERON:0005175;9.71e-08;1!UBERON:0001774;9.71e-08;1!UBERON:0001103;9.71e-08;1!UBERON:0001389;1.10e-07;1!UBERON:0000026;1.10e-07;1!UBERON:0008784;1.10e-07;1!UBERON:0006058;1.10e-07;1!UBERON:0003663;1.10e-07;1!UBERON:0004256;1.10e-07;1!UBERON:0004708;1.10e-07;1!UBERON:0002101;1.10e-07;1!UBERON:0004709;1.10e-07;1!UBERON:0002529;1.10e-07;1!UBERON:0010538;1.10e-07;1!UBERON:0003661;1.10e-07;1!UBERON:0010890;1.10e-07;1!UBERON:0002471;1.10e-07;1!UBERON:0001383;1.10e-07;1!UBERON:0010758;1.10e-07;1!UBERON:0010707;1.10e-07;1!UBERON:0000978;1.10e-07;1!UBERON:0002103;1.10e-07;1!UBERON:0001665;1.10e-07;1!UBERON:0003823;1.10e-07;1!UBERON:0000154;1.10e-07;1!UBERON:0010709;1.10e-07;1!UBERON:0000989;1.95e-07;1!UBERON:0008811;1.95e-07;1!UBERON:0007029;2.58e-07;1!UBERON:0002204;2.88e-07;70!UBERON:0001301;3.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.43e-22,62;UBERON:0002036,5.43e-22,62;UBERON:0003082,5.43e-22,62;UBERON:0002385,3.36e-21,64;UBERON:0001015,3.36e-21,64;UBERON:0000383,3.36e-21,64;UBERON:0002329,8.78e-19,71;UBERON:0003059,8.78e-19,71;UBERON:0007282,8.78e-19,71;UBERON:0004290,8.78e-19,71;UBERON:0009618,8.78e-19,71;UBERON:0003077,1.78e-18,72;UBERON:0007285,1.78e-18,72;UBERON:0007524,3.54e-18,73;UBERON:0007503,8.44e-17,78;UBERON:0005256,7.46e-16,122;UBERON:0000486,1.37e-15,83;UBERON:0005090,9.74e-14,2;UBERON:0001630,9.74e-14,2;UBERON:0000341,2.81e-13,2;UBERON:0003104,4.17e-11,160;UBERON:0009142,4.17e-11,160;UBERON:0000490,6.22e-11,148;UBERON:0001723,2.24e-09,3;UBERON:0001033,2.24e-09,3;UBERON:0010056,2.24e-09,3;UBERON:0002100,3.51e-09,199;UBERON:0002426,9.71e-08,1;UBERON:0003831,9.71e-08,1;UBERON:0003898,9.71e-08,1;UBERON:0004830,9.71e-08,1;UBERON:0003830,9.71e-08,1;UBERON:0005175,9.71e-08,1;UBERON:0001774,9.71e-08,1;UBERON:0001103,9.71e-08,1;UBERON:0010084,9.71e-08,1;UBERON:0005418,1.10e-07,1;UBERON:0001389,1.10e-07,1;UBERON:0000026,1.10e-07,1;UBERON:0008784,1.10e-07,1;UBERON:0006058,1.10e-07,1;UBERON:0003663,1.10e-07,1;UBERON:0004256,1.10e-07,1;UBERON:0004708,1.10e-07,1;UBERON:0002101,1.10e-07,1;UBERON:0004709,1.10e-07,1;UBERON:0002529,1.10e-07,1;UBERON:0010538,1.10e-07,1;UBERON:0003661,1.10e-07,1;UBERON:0010890,1.10e-07,1;UBERON:0002471,1.10e-07,1;UBERON:0001383,1.10e-07,1;UBERON:0004357,1.10e-07,1;UBERON:0004347,1.10e-07,1;UBERON:0005420,1.10e-07,1;UBERON:0005732,1.10e-07,1;UBERON:0010758,1.10e-07,1;UBERON:0010707,1.10e-07,1;UBERON:0000978,1.10e-07,1;UBERON:0002103,1.10e-07,1;UBERON:0001665,1.10e-07,1;UBERON:0003823,1.10e-07,1;UBERON:0000154,1.10e-07,1;UBERON:0010709,1.10e-07,1;UBERON:0005733,1.10e-07,1;UBERON:0005730,1.10e-07,1;UBERON:0000989,1.95e-07,1;UBERON:0008811,1.95e-07,1;UBERON:0006258,1.95e-07,1;UBERON:0005876,1.95e-07,1;UBERON:0004874,1.95e-07,1;UBERON:0007029,2.66e-07,1;UBERON:0001301,4.09e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0241773803446,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5582143024431,5.79125226670317,4.72595541865882,16.8317305445502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,20.9317488524622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,14.7906198986947,0.924291702687866,2.91656981979646,7.85668463161824,0.214840489736547,2.46528379654188,7.49994321261688,38.8179675419775,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,2.53103539774981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,21.6695964770673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.387956065953678,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0.717873024576814,0.199679000498991,0,0.669514372325618,0.335917362433631,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,2.46365748638403,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.2025821136733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,6.94695649745012,0,0,0,0,0.606965604236632,0,0.620916591138472,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,58.7640960382718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7754362784489,32.4414469665741,40.593505096837,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75731751132648,11.1890282787958,0,0.0620747142958579,0,0.25458863311266,1.41482032270754,10.8858373948481,25.6674975813961,0.404112318087525,0.215166616178029,3.65926392200615,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@RAPSN | |||
}} |
Latest revision as of 05:31, 18 September 2015
Short description: | p1@RAPSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAPSN_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | 0bp_to_ENST00000529341_5end |
EntrezGene: | RAPSN |
HGNC: | 9863 |
UniProt: | E9PK11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.66e-32 | 9 |
skeletal muscle myoblast | 8.42e-25 | 4 |
muscle precursor cell | 1.02e-12 | 58 |
myoblast | 1.02e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.02e-12 | 58 |
skeletal muscle satellite cell | 6.22e-09 | 3 |
smooth muscle cell of the brain vasculature | 1.13e-08 | 3 |
multinucleate cell | 1.61e-07 | 1 |
myotube | 1.61e-07 | 1 |
muscle cell | 1.88e-07 | 55 |