FFCP PHASE1:Hg19::chr11:3862206..3862217,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=391 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=672 | |||
|TSSclassifier=strong | |||
|UniProt=P84095,Q6ICQ8 | |||
|association_with_transcript=0bp_to_ENST00000351018,NM_001665,uc001lyu.2_5end | |||
|cluster_id=chr11:3862206..3862217,- | |||
|description=CAGE_peak_2_at_RHOG_5end | |||
|id=chr11:3862206..3862217,- | |||
|ontology_enrichment_celltype=CL:0000055!8.33e-16!180;CL:0000183!5.80e-11!59;CL:0000222!5.97e-10!119;CL:0000057!6.52e-10!75;CL:0002371!7.91e-10!591;CL:0000680!1.78e-09!57;CL:0000056!1.78e-09!57;CL:0000355!1.78e-09!57;CL:0000187!2.94e-09!54;CL:0000192!8.96e-08!42;CL:0000514!8.96e-08!42;CL:0000144!3.30e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.90e-10,121;CL:0000057,6.08e-10,76;CL:0000680,6.11e-10,58;CL:0000056,6.11e-10,58;CL:0000355,6.11e-10,58;CL:0000187,1.00e-09,55;CL:0000192,3.03e-08,43;CL:0000514,3.03e-08,43;CL:0000393,5.55e-07,61;CL:0000211,5.55e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.74e-10!83;UBERON:0002329!1.74e-10!83;UBERON:0003077!1.74e-10!83;UBERON:0003059!1.74e-10!83;UBERON:0007282!1.74e-10!83;UBERON:0009618!1.74e-10!83;UBERON:0007285!1.74e-10!83;UBERON:0005256!4.98e-10!143;UBERON:0000486!1.03e-09!82;UBERON:0004290!4.11e-09!70;UBERON:0002385!1.94e-08!63;UBERON:0001015!1.94e-08!63;UBERON:0000383!1.94e-08!63;UBERON:0001134!4.31e-08!61;UBERON:0002036!4.31e-08!61;UBERON:0003082!4.31e-08!61;UBERON:0001737!1.27e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.15e-07;9!UBERON:0001557;1.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.22e-11,78;UBERON:0000486,3.90e-10,83;UBERON:0002329,1.52e-09,71;UBERON:0003059,1.52e-09,71;UBERON:0007282,1.52e-09,71;UBERON:0004290,1.52e-09,71;UBERON:0009618,1.52e-09,71;UBERON:0003077,2.95e-09,72;UBERON:0007285,2.95e-09,72;UBERON:0007524,3.04e-09,73;UBERON:0002385,7.17e-09,64;UBERON:0001015,7.17e-09,64;UBERON:0000383,7.17e-09,64;UBERON:0001134,1.61e-08,62;UBERON:0002036,1.61e-08,62;UBERON:0003082,1.61e-08,62;UBERON:0003104,4.50e-08,160;UBERON:0009142,4.50e-08,160;UBERON:0001737,1.27e-07,9;UBERON:0005256,2.74e-07,122 | |||
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| |||
|short_description=p2@RHOG | |||
}} |
Latest revision as of 22:28, 17 September 2015
Short description: | p2@RHOG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHOG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000351018, NM_001665, uc001lyu.2_5end |
EntrezGene: | RHOG |
HGNC: | 672 |
UniProt: | P84095Q6ICQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.90e-10 | 121 |
fibroblast | 6.08e-10 | 76 |
muscle precursor cell | 6.11e-10 | 58 |
myoblast | 6.11e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.11e-10 | 58 |
muscle cell | 1.00e-09 | 55 |
smooth muscle cell | 3.03e-08 | 43 |
smooth muscle myoblast | 3.03e-08 | 43 |
electrically responsive cell | 5.55e-07 | 61 |
electrically active cell | 5.55e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.22e-11 | 78 |
multilaminar epithelium | 3.90e-10 | 83 |
somite | 1.52e-09 | 71 |
presomitic mesoderm | 1.52e-09 | 71 |
presumptive segmental plate | 1.52e-09 | 71 |
dermomyotome | 1.52e-09 | 71 |
trunk paraxial mesoderm | 1.52e-09 | 71 |
paraxial mesoderm | 2.95e-09 | 72 |
presumptive paraxial mesoderm | 2.95e-09 | 72 |
dense mesenchyme tissue | 3.04e-09 | 73 |
muscle tissue | 7.17e-09 | 64 |
musculature | 7.17e-09 | 64 |
musculature of body | 7.17e-09 | 64 |
skeletal muscle tissue | 1.61e-08 | 62 |
striated muscle tissue | 1.61e-08 | 62 |
myotome | 1.61e-08 | 62 |
mesenchyme | 4.50e-08 | 160 |
entire embryonic mesenchyme | 4.50e-08 | 160 |
larynx | 1.27e-07 | 9 |
trunk mesenchyme | 2.74e-07 | 122 |