FFCP PHASE1:Hg19::chr11:32112568..32112575,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9934 | |||
|TSSclassifier=strong | |||
|UniProt=E9PNT6 | |||
|association_with_transcript=-45bp_to_ENST00000400416_5end | |||
|cluster_id=chr11:32112568..32112575,+ | |||
|coexpression_cluster_id=C3142 | |||
|description=CAGE_peak_7_at_RCN1_5end | |||
|id=chr11:32112568..32112575,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.95e-32!180;CL:0000393!2.27e-14!60;CL:0000211!2.27e-14!60;CL:0000222!2.44e-14!119;CL:0000187!5.83e-14!54;CL:0000680!6.39e-14!57;CL:0000056!6.39e-14!57;CL:0000355!6.39e-14!57;CL:0000183!6.68e-14!59;CL:0000057!7.98e-13!75;CL:0002321!1.57e-12!248;CL:0000220!3.61e-12!246;CL:0000192!1.03e-09!42;CL:0000514!1.03e-09!42;CL:0000548!1.15e-08!679;CL:0000004!1.15e-08!679;CL:0000255!1.15e-08!679;CL:0000012!4.05e-08!682;CL:0000144!1.48e-07!625;CL:0000359!3.90e-07!32;CL:0000133!5.18e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000187;3.57e-10;55!CL:0000393;1.01e-08;61!CL:0000211;1.01e-08;61!CL:0000359;2.36e-08;32!CL:0000192;3.88e-08;43!CL:0000134;2.94e-07;55!CL:0000723;8.53e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,3.74e-17,55;CL:0000393,3.37e-16,61;CL:0000211,3.37e-16,61;CL:0000680,3.51e-16,58;CL:0000056,3.51e-16,58;CL:0000355,3.51e-16,58;CL:0000222,8.02e-15,121;CL:0000057,2.95e-14,76;CL:0000192,4.64e-12,43;CL:0000514,4.64e-12,43;CL:0002321,2.24e-10,250;CL:0000359,2.08e-09,32;CL:0000048,8.98e-09,427;CL:0000034,1.05e-08,441;CL:0000723,2.51e-08,433;CL:0000133,4.03e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000355;2.02e-09;58!CL:0000514;3.88e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.22e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.67e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.54e-14!83;UBERON:0002329!5.54e-14!83;UBERON:0003077!5.54e-14!83;UBERON:0003059!5.54e-14!83;UBERON:0007282!5.54e-14!83;UBERON:0009618!5.54e-14!83;UBERON:0007285!5.54e-14!83;UBERON:0004290!6.84e-13!70;UBERON:0002049!1.12e-12!79;UBERON:0007798!1.12e-12!79;UBERON:0000486!2.20e-12!82;UBERON:0001134!3.02e-12!61;UBERON:0002036!3.02e-12!61;UBERON:0003082!3.02e-12!61;UBERON:0002385!1.68e-11!63;UBERON:0001015!1.68e-11!63;UBERON:0000383!1.68e-11!63;UBERON:0000490!1.52e-09!138;UBERON:0005256!3.24e-09!143;UBERON:0000475!1.12e-08!365;UBERON:0000055!3.25e-08!69;UBERON:0004535!4.38e-08!110;UBERON:0000119!5.29e-08!312;UBERON:0000483!8.19e-08!309;UBERON:0002200!1.47e-07!11;UBERON:0006876!1.47e-07!11;UBERON:0001009!2.93e-07!113;UBERON:0002100!5.74e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.22e-09;11!UBERON:0002049;2.34e-08;75!UBERON:0007798;2.34e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.20e-16,78;UBERON:0007798,2.20e-16,78;UBERON:0007524,2.22e-15,73;UBERON:0002329,3.45e-15,71;UBERON:0003059,3.45e-15,71;UBERON:0007282,3.45e-15,71;UBERON:0004290,3.45e-15,71;UBERON:0009618,3.45e-15,71;UBERON:0003077,1.03e-14,72;UBERON:0007285,1.03e-14,72;UBERON:0001134,1.16e-14,62;UBERON:0002036,1.16e-14,62;UBERON:0003082,1.16e-14,62;UBERON:0002385,1.14e-13,64;UBERON:0001015,1.14e-13,64;UBERON:0000383,1.14e-13,64;UBERON:0000486,3.04e-13,83;UBERON:0004535,3.33e-13,109;UBERON:0007503,6.06e-13,78;UBERON:0001009,2.95e-12,112;UBERON:0000490,6.17e-11,148;UBERON:0000055,5.18e-10,68;UBERON:0006876,1.80e-09,11;UBERON:0005256,1.65e-08,122;UBERON:0004872,2.88e-08,83;UBERON:0003104,3.23e-08,160;UBERON:0009142,3.23e-08,160;UBERON:0007500,5.63e-08,59;UBERON:0001981,5.63e-08,59;UBERON:0004537,5.63e-08,59;UBERON:0006965,5.63e-08,59;UBERON:0001637,7.15e-08,42;UBERON:0003509,7.15e-08,42;UBERON:0004572,7.15e-08,42 | |||
|phase1_expression=1.99846217197612,0.428201047781966,2.39622486963151,2.00146596706261,1.78784437770915,0,5.06599756336621,2.52687949370732,1.04474251279935,0.982935746006035,0,0,1.05506791291381,1.8564952944007,1.65698687863958,4.03395087871065,4.82155622419182,0,1.46379839637152,0.738726348460727,0.816002764977012,3.44800193625897,1.71741592278634,1.64249310087461,1.00434111675842,0.458480434487708,0.738905305049512,0.393553906568396,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0.880801318004542,0.553995408531877,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0.32145117339416,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.390178042679635,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0.651083453856419,0.950452044448374,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,3.45228916977532,2.53007406669196,1.50401373190767,1.30361867064741,0,2.43317435151318,3.40325341790644,3.76939975686359,3.42555664203192,0.327447688744282,0.364295288292542,0,0.324547393654683,0,0.26591592103773,0.238490624305342,0.571994910780128,0,1.19257444420023,0,0.347140501607594,1.13061588384802,2.51699661725944,1.6507082516404,1.67195973229448,4.65150166504792,1.06729878806013,2.34304428935269,0.805658634218294,1.52054421143703,0.976248230192678,1.10298924103761,2.43042584364528,1.16089646769304,1.79623498100936,1.80178368773316,1.53316637465883,1.89853131913626,2.5648244150257,0,0,0.436094052142534,0.993943903390637,1.8994576749687,1.05927344650575,2.0078563452417,1.06400514659507,1.12135520028461,0,1.97334038733728,2.17847724779836,2.2900814251847,1.30769522490767,2.57307626996383,2.30470369792,1.17160715916898,2.49728061464256,1.1409436430889,1.04614076386261,1.40921398372518,0.971237666208789,0.421352420106746,1.63323337003915,0.982674538494144,3.20309921644873,3.56400857184616,2.71993622206413,1.82032272387605,1.43723628363248,1.34668891163253,1.7516592782075,1.6623846929051,1.75591048352335,1.22595118319608,3.00476117813194,1.36118619792025,0.179389635688862,2.56268866582281,2.11931901159562,0.600182192168805,1.23663035086127,0.257640540045629,2.04728541964749,0.506328996723799,0.974370051611986,0.504867548488229,2.94559675655358,3.23292113637624,2.13005755509969,1.10827308050404,1.3564847384839,0.57978255948989,0.818238361772504,0.286804595389004,1.58565817968474,1.45782745153634,1.04574548582567,1.0366105501537,1.7662459561294,1.45990943630332,0,2.57296375277154,2.76269842704961,1.85747171212792,4.33127689001751,0.591534000199219,1.18009283054671,0,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0,0.769494313892781,0,0,2.057870056657,2.94017422771084,0,0,0.590789906681404,0.441463099414651,0.122988438543114,4.11762744716461,0.439001141634502,0,0.502644862058154,0.555530670951178,3.25808305310325,3.11980435583874,0,3.4779121492523,5.28339124061197,1.73239737313289,1.85194205030644,1.33177906564219,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.0895585227028483,0,0.766765358330422,0.492663237895943,0.264145302039678,0,0,0,0.825472625798197,0.763976851116555,0,1.71072446022705,0.205654985406647,1.8020583470635,0,0.560655421726804,1.30788020649984,1.10007428731425,4.00742318849111,3.57656445851882,2.535908257668,1.59562869950922,1.04007436911366,1.54324424557285,0,1.3321108950805,2.28764789853036,2.71310802695722,4.11620168390384,1.30294473717494,2.48774364119782,1.58390374586686,2.71295439353627,1.74306691720059,2.39935178836937,0,0.502257091432126,0,1.19812427745791,2.29723871668228,1.42636905040718,0.868687840005475,0.61642896765115,1.43248770591916,0.112085143993527,0,0,0.256686072559497,0.508189248444927,0,1.54657762555539,0.837581326671744,0.637938751653163,0,0,0,3.18997878469764,0.500170521059677,1.35632511849868,2.07970861530807,1.60586089917446,1.41932173530541,2.57711112983969,3.00946099727719,0,1.03473071292505,2.65690239414175,2.94990669666725,2.08520674723399,1.17480694477644,2.05886054286514,0,0,0,0,0,0.907170879989041,1.24053903909388,1.07423381301644,2.52594084989766,2.30650468660262,2.55853624533352,2.89537058058494,0,1.54209693802656,3.55123450626254,0.9033987161519,1.03850885836724,1.16210378459959,0.725156697549733,0.601519410909855,0.644566922551274,3.67406234126742,2.1850940160806,4.19598127870157,0.451199612907412,1.5403067420883,0,0,1.47772280450026,0,0.850468526382578,0.431831832204279,0,0,2.00675909541941,1.27438136522519,0.831076008928724,0.447749509444357,0,0,2.56450125116389,0.328014645699706,0.976135183992909,0.515205058238611,1.28197250745681,0.577566499444116,0.574265537996172,0.650060246036521,4.82051789532479,4.54352375972973,2.7728751080636,1.38153307253517,1.37836572484531,5.47843248828196,2.90033387828457,2.47157219506693,3.91740956845644,0.495854746082934,1.15314040419064,0.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| |||
|short_description=p7@RCN1 | |||
}} |
Latest revision as of 15:19, 17 September 2015
Short description: | p7@RCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RCN1_5end |
Coexpression cluster: | C3142_Smooth_mesenchymal_small_Sertoli_Lens_Fibroblast_anaplastic |
Association with transcript: | -45bp_to_ENST00000400416_5end |
EntrezGene: | RCN1 |
HGNC: | 9934 |
UniProt: | E9PNT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 3.74e-17 | 55 |
electrically responsive cell | 3.37e-16 | 61 |
electrically active cell | 3.37e-16 | 61 |
muscle precursor cell | 3.51e-16 | 58 |
myoblast | 3.51e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.51e-16 | 58 |
mesodermal cell | 8.02e-15 | 121 |
fibroblast | 2.95e-14 | 76 |
smooth muscle cell | 4.64e-12 | 43 |
smooth muscle myoblast | 4.64e-12 | 43 |
embryonic cell | 2.24e-10 | 250 |
vascular associated smooth muscle cell | 2.08e-09 | 32 |
multi fate stem cell | 8.98e-09 | 427 |
stem cell | 1.05e-08 | 441 |
somatic stem cell | 2.51e-08 | 433 |
neurectodermal cell | 4.03e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.20e-16 | 78 |
vascular system | 2.20e-16 | 78 |
dense mesenchyme tissue | 2.22e-15 | 73 |
somite | 3.45e-15 | 71 |
presomitic mesoderm | 3.45e-15 | 71 |
presumptive segmental plate | 3.45e-15 | 71 |
dermomyotome | 3.45e-15 | 71 |
trunk paraxial mesoderm | 3.45e-15 | 71 |
paraxial mesoderm | 1.03e-14 | 72 |
presumptive paraxial mesoderm | 1.03e-14 | 72 |
skeletal muscle tissue | 1.16e-14 | 62 |
striated muscle tissue | 1.16e-14 | 62 |
myotome | 1.16e-14 | 62 |
muscle tissue | 1.14e-13 | 64 |
musculature | 1.14e-13 | 64 |
musculature of body | 1.14e-13 | 64 |
multilaminar epithelium | 3.04e-13 | 83 |
cardiovascular system | 3.33e-13 | 109 |
epithelial vesicle | 6.06e-13 | 78 |
circulatory system | 2.95e-12 | 112 |
unilaminar epithelium | 6.17e-11 | 148 |
vessel | 5.18e-10 | 68 |
vasculature of organ | 1.80e-09 | 11 |
trunk mesenchyme | 1.65e-08 | 122 |
splanchnic layer of lateral plate mesoderm | 2.88e-08 | 83 |
mesenchyme | 3.23e-08 | 160 |
entire embryonic mesenchyme | 3.23e-08 | 160 |
epithelial tube open at both ends | 5.63e-08 | 59 |
blood vessel | 5.63e-08 | 59 |
blood vasculature | 5.63e-08 | 59 |
vascular cord | 5.63e-08 | 59 |
artery | 7.15e-08 | 42 |
arterial blood vessel | 7.15e-08 | 42 |
arterial system | 7.15e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.67e-08 | 14 |