FFCP PHASE1:Hg19::chr11:2399357..2399371,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:2399357..2399371,+ | |||
|description=CAGE_peak_at_chr11:2399357..2399371,+ | |||
|id=chr11:2399357..2399371,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;6.70e-07;3!CL:0002567;6.70e-07;3!CL:0000388;6.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,5.48e-07,3;CL:0000388,5.48e-07,3;CL:0002567,6.36e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.51e-14;3!UBERON:0003057;1.51e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.35e-15;3!DOID:127;2.35e-15;3!DOID:0060072;1.25e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.23e-15,3;DOID:127,2.23e-15,3;DOID:0060072,1.20e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.87e-11!57;UBERON:0005068!2.87e-11!57;UBERON:0006241!2.87e-11!57;UBERON:0007135!2.87e-11!57;UBERON:0002616!1.87e-09!59;UBERON:0001017!3.11e-08!82;UBERON:0003075!4.14e-08!86;UBERON:0007284!4.14e-08!86;UBERON:0000955!6.11e-08!69;UBERON:0006238!6.11e-08!69;UBERON:0005743!9.72e-08!86;UBERON:0000073!1.11e-07!94;UBERON:0001016!1.11e-07!94;UBERON:0002346!4.29e-07!90;UBERON:0003076!5.28e-07!15;UBERON:0003057!5.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.51e-14;3!UBERON:0005174;1.51e-14;3!UBERON:0001137;1.51e-14;3!UBERON:0001896;4.59e-14;3!UBERON:0005290;4.59e-14;3!UBERON:0002298;3.71e-12;6!UBERON:0001876;6.01e-10;2!UBERON:0004732;2.06e-08;13!UBERON:0007846;6.70e-07;3!UBERON:0000043;6.70e-07;3!UBERON:0007845;6.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.44e-14,3;UBERON:0005174,1.44e-14,3;UBERON:0001137,1.44e-14,3;UBERON:0003076,5.17e-14,15;UBERON:0003057,5.17e-14,15;UBERON:0001896,7.64e-14,3;UBERON:0005290,7.64e-14,3;UBERON:0010096,7.64e-14,3;UBERON:0002298,3.06e-12,6;UBERON:0001876,5.31e-10,2;UBERON:0004732,1.74e-08,13;UBERON:0007846,5.48e-07,3;UBERON:0000043,5.48e-07,3;UBERON:0007845,5.48e-07,3 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0.313454721478088,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0.142169232487422,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,1.29096936716765,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.320929027076094,1.27867425159808,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.25618263945135,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,0,0,0,1.13061588384802,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,1.22031028774085,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0.926864265692532,2.29469296599051,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0.936480230490962,0,0.298897361103602,0,0.323745888736263,0,0.204154171254893,0.368502951935304,0.516628905878827,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,1.20036438433761,0.309157587715317,0.257640540045629,0,0.675105328965065,0.292311015483596,0.504867548488229,0.0920498986422993,0.969876340912871,0.710019185033229,0,0.67824236924195,0.193260853163297,0,0,0.365921118388786,0.397589304964456,0.348581828608555,0.310983165046111,0,0.72995471815166,0,1.28648187638577,0,1.85747171212792,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.288732895522148,1.85194205030644,0.380508304469197,0,0.858486162094873,0.492434012174795,0.702012795417713,0.743155811443641,0,0.16798212819886,0,0,0.290633938513962,0.383382679165211,0,0.088048434013226,1.03664057770386,1.15295962733569,0.25248486685276,0.317489471460845,0,1.17217447210047,1.71072446022705,0.308482478109971,0.300343057843917,0.857479297891735,0,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,1.42636905040718,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.713715955188647,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.434418072340414,0.783204629850962,0.343143423810856,0,0,0.213455115606889,0,0,0,0.992431231275107,0.153461973288062,0,0.512556597022804,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.232420756919918,0,1.00253235151642,0,0.114814448164607,0.182091168006717,0.917870904715969,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0.193341436584244,0,0,0,0,0.435050081742686,0,0.0890320356467374,0,0.384380134730212,0.382838137483752,0.4046311234222,0.464845549297286,1.25924938732256,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0.235624804691373,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0.563391205064483,0.143411352204052,0.294747123039363,0,0,0.633322905892992,0.329294892959902,0.379473173765715,0.699869440489966,0.0962221127255121,0,0,0.188287601553558,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,0.844175070377856,0,0.331737779793674,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0.183195186803725,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0.539209063845416,0.802577647298789,0,0,0,0,1.18375320854817,0,0,0.252746318513952,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.523014231561666,0,0,1.80126086612937,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,0.4126183097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| |||
|short_description=p@chr11:2399357..2399371,+ | |||
}} |
Latest revision as of 21:11, 23 July 2015
Short description: | p@chr11:2399357..2399371, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2399357..2399371, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.48e-07 | 3 |
tendon cell | 5.48e-07 | 3 |
light melanocyte | 6.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.44e-14 | 3 |
dorsal region element | 1.44e-14 | 3 |
dorsum | 1.44e-14 | 3 |
posterior neural tube | 5.17e-14 | 15 |
chordal neural plate | 5.17e-14 | 15 |
medulla oblongata | 7.64e-14 | 3 |
myelencephalon | 7.64e-14 | 3 |
future myelencephalon | 7.64e-14 | 3 |
brainstem | 3.06e-12 | 6 |
amygdala | 5.31e-10 | 2 |
segmental subdivision of nervous system | 1.74e-08 | 13 |
dense regular connective tissue | 5.48e-07 | 3 |
tendon | 5.48e-07 | 3 |
regular connective tissue | 5.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.23e-15 | 3 |
leiomyoma | 2.23e-15 | 3 |
benign neoplasm | 1.20e-11 | 4 |