FFCP PHASE1:Hg19::chr8:121823676..121823687,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:121823676..121823687,+
|short_description=p5@AK302130
|description=CAGE_peak_5_at_AK302130_5end
|association_with_transcript=136bp_to_AK302130_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7Z7J7 | |UniProt=B7Z7J7 | ||
|association_with_transcript=136bp_to_AK302130_5end | |||
|cluster_id=chr8:121823676..121823687,+ | |||
|description=CAGE_peak_5_at_AK302130_5end | |||
|id=chr8:121823676..121823687,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.59e-12;3!CL:0000082;6.15e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.24e-12,3;CL:0000082,6.59e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;8.62e-20;7!DOID:3904;8.62e-20;7!DOID:3910;9.07e-18;2!DOID:3905;1.22e-15;9!DOID:1324;8.46e-10;15!DOID:5409;1.44e-09;4!DOID:0050615;3.01e-09;16!DOID:3908;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.04e-19,7;DOID:3904,1.04e-19,7;DOID:3910,1.27e-17,2;DOID:3905,1.41e-15,9;DOID:1324,9.25e-10,15;DOID:5409,1.44e-09,4;DOID:0050615,3.27e-09,16;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.07e-18;2!UBERON:0002173;9.07e-18;2!UBERON:0002186;9.07e-18;2!UBERON:0004821;2.59e-12;3!UBERON:0007499;2.59e-12;3!UBERON:0003215;2.59e-12;3!UBERON:0010368;2.59e-12;3!UBERON:0009911;2.59e-12;3!UBERON:0002299;2.59e-12;3!UBERON:0006524;2.59e-12;3!UBERON:0008874;2.59e-12;3!UBERON:0002169;2.59e-12;3!UBERON:0004894;2.59e-12;3!UBERON:0009856;1.44e-09;4!UBERON:0004802;6.15e-08;19!UBERON:0000115;6.15e-08;19!UBERON:0002048;5.57e-07;22!UBERON:0004807;5.57e-07;22!UBERON:0000117;5.57e-07;22!UBERON:0000171;5.57e-07;22!UBERON:0000170;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0004802,6.59e-08,19;UBERON:0000115,6.59e-08,19;UBERON:0002048,5.91e-07,22;UBERON:0000117,5.91e-07,22;UBERON:0000171,5.91e-07,22;UBERON:0000170,5.91e-07,22;UBERON:0005597,5.91e-07,22;UBERON:0000118,5.91e-07,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0.28853842595289,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,1.13654458722565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.808842526250219,0,0.0846733320657845,0,0,0.482259445395058,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35535298446752,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25848402338429,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@AK302130 | |||
}} | }} |
Latest revision as of 22:43, 15 September 2015
Short description: | p5@AK302130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AK302130_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_AK302130_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.24e-12 | 3 |
epithelial cell of lung | 6.59e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
respiratory tract epithelium | 6.59e-08 | 19 |
lung epithelium | 6.59e-08 | 19 |
lung | 5.91e-07 | 22 |
respiratory tube | 5.91e-07 | 22 |
respiration organ | 5.91e-07 | 22 |
pair of lungs | 5.91e-07 | 22 |
lung primordium | 5.91e-07 | 22 |
lung bud | 5.91e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.04e-19 | 7 |
bronchogenic carcinoma | 1.04e-19 | 7 |
lung adenocarcinoma | 1.27e-17 | 2 |
lung carcinoma | 1.41e-15 | 9 |
lung cancer | 9.25e-10 | 15 |
lung small cell carcinoma | 1.44e-09 | 4 |
respiratory system cancer | 3.27e-09 | 16 |
non-small cell lung carcinoma | 7.49e-08 | 5 |