FFCP PHASE1:Hg19::chr11:18034671..18034683,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17499 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UGK8 | |||
|association_with_transcript=25bp_to_ENST00000265965_5end | |||
|cluster_id=chr11:18034671..18034683,- | |||
|description=CAGE_peak_3_at_SERGEF_5end | |||
|id=chr11:18034671..18034683,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.00e-20!86;UBERON:0000073!5.55e-20!94;UBERON:0001016!5.55e-20!94;UBERON:0001017!9.21e-20!82;UBERON:0002616!2.61e-16!59;UBERON:0000955!4.26e-16!69;UBERON:0006238!4.26e-16!69;UBERON:0001049!4.48e-16!57;UBERON:0005068!4.48e-16!57;UBERON:0006241!4.48e-16!57;UBERON:0007135!4.48e-16!57;UBERON:0002346!9.84e-16!90;UBERON:0003075!1.11e-15!86;UBERON:0007284!1.11e-15!86;UBERON:0007023!6.48e-15!115;UBERON:0002780!4.54e-12!41;UBERON:0001890!4.54e-12!41;UBERON:0006240!4.54e-12!41;UBERON:0000924!5.81e-12!173;UBERON:0006601!5.81e-12!173;UBERON:0004121!9.59e-12!169;UBERON:0003080!2.33e-11!42;UBERON:0000033!1.49e-10!123;UBERON:0001893!1.51e-10!34;UBERON:0003056!2.99e-10!61;UBERON:0000153!3.66e-10!129;UBERON:0007811!3.66e-10!129;UBERON:0002791!5.10e-10!33;UBERON:0002020!7.22e-10!34;UBERON:0003528!7.22e-10!34;UBERON:0001869!1.45e-09!32;UBERON:0000956!1.30e-07!25;UBERON:0000203!1.30e-07!25;UBERON:0000477!1.38e-07!286;UBERON:0002619!4.85e-07!22;UBERON:0000025!7.24e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001016;1.08e-09;83!UBERON:0001893;5.03e-09;34!UBERON:0002780;9.56e-09;41!UBERON:0001890;9.56e-09;41!UBERON:0000073;1.66e-08;53!UBERON:0002616;1.66e-08;53!UBERON:0001869;2.68e-08;32!UBERON:0002791;3.03e-07;32!UBERON:0003528;3.22e-07;34!UBERON:0002020;3.22e-07;34!UBERON:0000349;3.55e-07;5!UBERON:0001017;4.70e-07;75!UBERON:0002619;5.02e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.19e-22,81;UBERON:0001016,4.09e-19,89;UBERON:0000955,3.02e-16,68;UBERON:0006238,3.02e-16,68;UBERON:0001049,8.77e-15,56;UBERON:0005068,8.77e-15,56;UBERON:0006241,8.77e-15,56;UBERON:0007135,8.77e-15,56;UBERON:0003075,1.07e-14,82;UBERON:0007284,1.07e-14,82;UBERON:0002346,8.74e-14,86;UBERON:0000073,4.42e-12,53;UBERON:0002616,4.42e-12,53;UBERON:0004121,6.15e-12,171;UBERON:0000924,6.15e-12,171;UBERON:0006601,6.15e-12,171;UBERON:0010371,9.29e-12,104;UBERON:0001893,1.16e-10,34;UBERON:0002780,3.42e-10,41;UBERON:0001890,3.42e-10,41;UBERON:0003080,3.42e-10,41;UBERON:0006240,3.42e-10,41;UBERON:0001869,2.13e-09,32;UBERON:0003056,1.26e-08,61;UBERON:0007023,3.22e-08,114;UBERON:0002791,1.14e-07,32;UBERON:0000349,2.40e-07,5;UBERON:0010314,2.49e-07,132;UBERON:0002619,3.31e-07,22;UBERON:0003528,3.87e-07,34;UBERON:0002020,3.87e-07,34;UBERON:0011216,7.12e-07,223 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.684372125364421,0.502170558379211,0.382067028739756,0,0.472264687882075,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0.587200878669695,0,0.601633342410425,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0.32145117339416,1.14005097496499,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,1.77901850772711,0.426730222566507,0.800791974072025,0,0,0,0,0,0.382273228125229,1.32171328579026,1.12101712596307,0.526768169550154,0.196709770113833,0,0,0.167186495390678,0.651844533267181,0.946895611469467,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0.535081656179426,0,0.339928028092699,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.602300476311091,0.127986611154418,1.24930726552346,0.710331756132051,0,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0.973269740605272,0.661743720148475,0.886917589850256,0.614843499851882,0.589405839739707,0,0.370784442784429,0,0.348259474598534,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0.56530794192401,0,0.550236083880135,0.835979866147242,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,0.496971951695318,0,0.264818361626438,0,0.709336764396714,0,0,0,0,0.269421344139376,0.326923806226917,0.605429710579726,1.15235184896,0.234321431833797,0.624320153660641,0,0.298897361103602,0.117434498643765,0,0,0.61246251376468,0.368502951935304,0.413303124703062,1.18800285728205,0.494533858557114,0,0.718618141816238,0.336672227908132,0.500474079487857,0,0,0.612975591598039,0.150238058906597,0,0.538168907066586,0.427114777637135,0.211931901159562,0,0.309157587715317,0.257640540045629,0.37223371266318,0.168776332241266,0,0.504867548488229,0.368199594569197,0.646584227275248,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,1.47008711385542,0,0.982827216677626,0,0.441463099414651,0,0,0,1.1240175325762,0,0,0,0,0,0.695582429850461,0,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0.268675568108545,0,0.383382679165211,0.492663237895943,0.264145302039678,0.207328115540772,0.288239906833923,0.25248486685276,0.190493682876507,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0,0.336393253036082,0,0.51336800074665,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,1.74306691720059,0,1.2162378064119,0,0,0.239624855491583,0,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0.394061520403854,0.215627574859517,0.641715181398742,0.76228387266739,0,1.54657762555539,1.67516265334349,2.55175500661265,0,0,0,0.36807447515742,0,0,0,0,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.173767228936166,0.979005787313703,0.343143423810856,0.206768026122887,0,0.106727557803444,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0,0,0.116210378459959,0,0.40101294060657,0,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0.231046011313244,2.35304930753057,0,0.527758144464379,0,0.170093705276516,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0.54941678891006,0.082509499920588,0,0,0,0.48335359146061,0.154048617114644,0,0.275673144969061,0.107420244868274,0.580066775656914,0.0852266274161009,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,1.116475108079,0.316379424718726,0.762520775695299,0.511795582622668,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0.842516912477962,0.48763373908959,0,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0.822724546172388,0,0,0,0.427296284509893,0,0.490080431962063,0,0.28853842595289,0.355709216742071,0.159426272728822,0.199579371432817,0,0,0.649243880549111,0,0,0,0,0,0.321176150207399,0.403599414382095,0,0.343505344755765,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.293016358543788,0.849523652246594,0,0,0,0,0,0,1.54736358051564,0.333926115068718,0.16480387422676,0.422250816255987,0.597743964753209,0.552567831062295,0.503865495708552,0.306806047506464,0.123084805461069,0,0.0898683511473268,0,0,0.690503839458535,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,1.4471572635049,3.05163472634166,1.21637185924347,0.886642856860642,0.438770794307945,0,0,0.923403102045565,0.341826167541004,0,0.0897576444097721,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0.317873157960757,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,0.593042257361244,0.617819694732514,0.104421949505455,1.28062152663286,0.802577647298789,0.702793337176017,0.182454789215666,0,0.728341138602278,0.789168805698781,0,0.91821828489147,0.63186579628488,1.05226393590145,0.518440956986236,0,0,0,0,0,0.554698692052555,0.520679215005393,0,0.261177619741208,0.873633341210151,0.343972064943233,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.484945082442097,0.529536760149002,1.12990370390266,0.137041924646751,0.397429223405979,1.39283751102933,0.195551382734803,0.400794101257669,0.85381197895741,0,0,0.229073192331831,0.686379991447858,0.14405479798815,0.124252535565433,0.235694034616795,0.407712618220842,0.627617077873999,0.203996435272644,0,0.600420288709789,0.684526894459965,1.27746588066972,0.859530882839914,0.262887354279314,0.837847203816763,1.60412296808179,1.43574604915363,0.199679000498991,0,0.446342914883745,0.604651252380536,0,0,0.236349546921671,0.247247575143499,0.404421263125109,0.196854963029498,0.0846733320657845,1.59045937961861,0.544813624446302,0.643012593860077,0,0.415440338029185,0,0,0.91124334987037,0,0.0788057072991982,0.419636705079985,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0,0,0.082092520749339,0,0.339936274560377,0.146552233678082,0,0.258565912723101,0.92562821219883,0,0,0.320362237703084,0.157204305099666,0.828478110694391,0.992332043623902,0,0.487170393523584,0,0.544017803369474,0.7520696820681,1.22538230705385,0.983617892129413,0.942324577501406,0,0.610131324509816,0.625954653532499,0,0.776503360757966,1.30402446176905,2.07522952404346,0.124980407962107,0,0.856396000634902,0,0,0.434763085832475,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0.466311601748341,0,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0.226705925512272,0,0.244736704506468,0,0.308801447160972,0.438568099157414,0.353378291891762,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0.414775308455192,0,0.132864840313363,0.163565394255844,0,0.491545817507439,0,0.59996218756479,0.320075189082423,0.172214979660816,0.567515953566836,0,0,0.622077260032973,0.255788742607303,0.431299245586727,0.157265941855896,0.54604819096007,0.169732529954025,0.637724760305049,0,0,0.636008701306837,0.23658523500376,0,0,0.3062454773532,1.09189682663981,0,0.957803154342908,0.615349092722265,2.01657356977374,0.691572524642179,0.807378228159255,0,0.0981477185010256,0.235939446695481,0,0,0.762764190934334,0,0,1.35378591028663,0.20170506870352,0,0,0,0,1.08060135389431,0.781078098613847,0.620060389503552,1.26831620387814,1.09394961803644,0,0,0.703484977438482,0.127762427639595,0.535701835878287,0.336283722218824,1.21393120847326,0.91064876540519,0.0887023701626388,0.345701962667338,0.171488009437418,0.679697329768317,0.72350050919134,0.118193840883968,0,0.941917114206168,0.628462359664008,0,0,0.215927591218621,0.47775168788705,1.35805433935647,1.42212250559454,0.23248285073625,0,0,0,0,0,0.430227358820278,0.236664001461131,0.511280428554946,0.846774100381858,0.22910686854405,0.31020638566432,0,0,0.294450700845729,0.121917924982269,0.647428837187895,0.205325613712494,0,0,0,1.19370465096821,0.237840181555137,0,2.41869136839944,1.20770274853339,0.308696632431779,0,0.470317296361523,1.22574160876953,0,0.981542335574726,1.18818560130834,1.2679671827502,0.339854229375634,0.0939839179798536,0.580120991762195,0.199882311849858,0,0,0,0,0.458729283404541,0.716697915757256,0,1.42782129400921,1.30905207102113,0,0.743990036333503,0,0,0.126166424835079,0.327796715891087,0.380095503034311,0,0,0,0.250707539292375,0.530450887527676,0.267964130156178,0,0.930896962757057,0,0,0.452122368852043,0.682821857254437,0,0.572824424503484,0,0.217716747896961,0.684466602170562,0.336760265072938,0.286888821570705,0,0.325613074443898,0.106727345877715,0,0,2.34640942403454,0.488965776731466,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p3@SERGEF | |||
}} |
Latest revision as of 01:37, 17 September 2015
Short description: | p3@SERGEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SERGEF_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000265965_5end |
EntrezGene: | SERGEF |
HGNC: | 17499 |
UniProt: | Q9UGK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.19e-22 | 81 |
nervous system | 4.09e-19 | 89 |
brain | 3.02e-16 | 68 |
future brain | 3.02e-16 | 68 |
neural tube | 8.77e-15 | 56 |
neural rod | 8.77e-15 | 56 |
future spinal cord | 8.77e-15 | 56 |
neural keel | 8.77e-15 | 56 |
neural plate | 1.07e-14 | 82 |
presumptive neural plate | 1.07e-14 | 82 |
neurectoderm | 8.74e-14 | 86 |
regional part of nervous system | 4.42e-12 | 53 |
regional part of brain | 4.42e-12 | 53 |
ectoderm-derived structure | 6.15e-12 | 171 |
ectoderm | 6.15e-12 | 171 |
presumptive ectoderm | 6.15e-12 | 171 |
ecto-epithelium | 9.29e-12 | 104 |
telencephalon | 1.16e-10 | 34 |
regional part of forebrain | 3.42e-10 | 41 |
forebrain | 3.42e-10 | 41 |
anterior neural tube | 3.42e-10 | 41 |
future forebrain | 3.42e-10 | 41 |
cerebral hemisphere | 2.13e-09 | 32 |
pre-chordal neural plate | 1.26e-08 | 61 |
adult organism | 3.22e-08 | 114 |
regional part of telencephalon | 1.14e-07 | 32 |
limbic system | 2.40e-07 | 5 |
structure with developmental contribution from neural crest | 2.49e-07 | 132 |
regional part of cerebral cortex | 3.31e-07 | 22 |
brain grey matter | 3.87e-07 | 34 |
gray matter | 3.87e-07 | 34 |
organ system subdivision | 7.12e-07 | 223 |