FFCP PHASE1:Hg19::chr11:133938925..133938950,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15532 | |||
|TSSclassifier=strong | |||
|UniProt=B3KWG9 | |||
|association_with_transcript=-15bp_to_ENST00000441717,ENST00000531698,ENST00000532252,ENST00000534549_5end | |||
|cluster_id=chr11:133938925..133938950,+ | |||
|description=CAGE_peak_2_at_JAM3_5end | |||
|id=chr11:133938925..133938950,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.76e-32!180;CL:0000680!4.31e-17!57;CL:0000056!4.31e-17!57;CL:0000355!4.31e-17!57;CL:0000183!8.99e-17!59;CL:0000187!1.25e-16!54;CL:0000222!2.64e-16!119;CL:0000393!5.12e-16!60;CL:0000211!5.12e-16!60;CL:0000192!2.69e-13!42;CL:0000514!2.69e-13!42;CL:0000359!2.48e-12!32;CL:0000057!5.49e-12!75;CL:0000220!3.05e-07!246;CL:0002321!3.51e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.67e-11;32!CL:0000192;1.57e-09;43!CL:0000187;2.83e-09;55!CL:0000393;1.73e-08;61!CL:0000211;1.73e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.09e-17,58;CL:0000056,3.09e-17,58;CL:0000355,3.09e-17,58;CL:0000222,7.97e-17,121;CL:0000187,9.26e-17,55;CL:0000393,3.64e-16,61;CL:0000211,3.64e-16,61;CL:0000192,2.31e-13,43;CL:0000514,2.31e-13,43;CL:0000057,1.41e-12,76;CL:0000359,1.58e-12,32;CL:0002321,5.17e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.57e-09;43!CL:0000355;5.29e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!7.20e-26!113;UBERON:0004535!1.14e-25!110;UBERON:0002049!1.45e-21!79;UBERON:0007798!1.45e-21!79;UBERON:0004872!3.66e-20!84;UBERON:0001981!3.92e-20!60;UBERON:0007500!3.92e-20!60;UBERON:0004537!3.92e-20!60;UBERON:0006965!3.92e-20!60;UBERON:0000055!1.53e-19!69;UBERON:0001637!3.36e-17!42;UBERON:0003509!3.36e-17!42;UBERON:0004572!3.36e-17!42;UBERON:0004290!6.89e-17!70;UBERON:0000119!1.87e-16!312;UBERON:0000914!3.02e-16!83;UBERON:0002329!3.02e-16!83;UBERON:0003077!3.02e-16!83;UBERON:0003059!3.02e-16!83;UBERON:0007282!3.02e-16!83;UBERON:0009618!3.02e-16!83;UBERON:0007285!3.02e-16!83;UBERON:0002385!3.69e-16!63;UBERON:0001015!3.69e-16!63;UBERON:0000383!3.69e-16!63;UBERON:0001134!5.86e-16!61;UBERON:0002036!5.86e-16!61;UBERON:0003082!5.86e-16!61;UBERON:0000483!1.35e-15!309;UBERON:0000475!3.75e-15!365;UBERON:0004573!7.52e-14!33;UBERON:0004571!7.52e-14!33;UBERON:0003914!2.90e-13!118;UBERON:0000486!6.61e-13!82;UBERON:0004111!1.07e-12!241;UBERON:0000025!1.38e-12!194;UBERON:0000477!4.99e-11!286;UBERON:0005256!1.80e-10!143;UBERON:0000481!5.32e-09!347;UBERON:0000490!8.21e-09!138;UBERON:0000468!1.12e-08!659;UBERON:0000947!4.22e-08!21;UBERON:0010191!4.22e-08!21;UBERON:0002100!9.29e-08!216;UBERON:0002346!1.36e-07!90;UBERON:0003075!4.07e-07!86;UBERON:0007284!4.07e-07!86;UBERON:0000467!4.43e-07!625;UBERON:0000073!5.15e-07!94;UBERON:0001016!5.15e-07!94;UBERON:0000480!5.52e-07!626;UBERON:0000924!6.66e-07!173;UBERON:0006601!6.66e-07!173;UBERON:0007100!8.53e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.31e-13;42!UBERON:0003509;2.31e-13;42!UBERON:0004572;2.31e-13;42!UBERON:0004573;3.54e-13;33!UBERON:0004571;3.54e-13;33!UBERON:0007500;7.40e-11;56!UBERON:0001981;7.40e-11;56!UBERON:0004537;7.40e-11;56!UBERON:0000055;2.64e-09;65!UBERON:0002049;1.58e-08;75!UBERON:0007798;1.58e-08;75!UBERON:0000947;3.36e-08;21!UBERON:0010191;3.36e-08;21!UBERON:0003914;5.44e-08;74!UBERON:0004535;1.61e-07;109!UBERON:0001009;2.35e-07;112!UBERON:0002385;3.62e-07;31!UBERON:0001015;3.62e-07;31!UBERON:0000383;3.62e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,1.39e-25,112;UBERON:0004535,2.23e-25,109;UBERON:0002049,2.18e-21,78;UBERON:0007798,2.18e-21,78;UBERON:0007500,6.45e-20,59;UBERON:0001981,6.45e-20,59;UBERON:0004537,6.45e-20,59;UBERON:0006965,6.45e-20,59;UBERON:0004872,6.75e-20,83;UBERON:0000055,2.48e-19,68;UBERON:0007503,1.46e-17,78;UBERON:0001637,1.75e-17,42;UBERON:0003509,1.75e-17,42;UBERON:0004572,1.75e-17,42;UBERON:0007524,2.92e-17,73;UBERON:0002329,7.06e-17,71;UBERON:0003059,7.06e-17,71;UBERON:0007282,7.06e-17,71;UBERON:0004290,7.06e-17,71;UBERON:0009618,7.06e-17,71;UBERON:0003077,7.42e-17,72;UBERON:0007285,7.42e-17,72;UBERON:0002385,4.04e-16,64;UBERON:0001015,4.04e-16,64;UBERON:0000383,4.04e-16,64;UBERON:0000119,5.07e-16,309;UBERON:0001134,6.54e-16,62;UBERON:0002036,6.54e-16,62;UBERON:0003082,6.54e-16,62;UBERON:0000483,3.64e-15,306;UBERON:0004573,4.51e-14,33;UBERON:0004571,4.51e-14,33;UBERON:0003914,4.10e-13,117;UBERON:0004111,5.87e-13,240;UBERON:0000486,9.92e-13,83;UBERON:0000025,1.07e-12,192;UBERON:0010314,6.18e-11,132;UBERON:0005256,3.53e-10,122;UBERON:0000490,1.93e-09,148;UBERON:0003104,1.93e-09,160;UBERON:0009142,1.93e-09,160;UBERON:0000947,3.21e-08,21;UBERON:0010191,3.21e-08,21;UBERON:0002346,6.38e-08,86;UBERON:0003075,1.97e-07,82;UBERON:0007284,1.97e-07,82;UBERON:0004121,3.61e-07,171;UBERON:0000924,3.61e-07,171;UBERON:0006601,3.61e-07,171;UBERON:0007100,6.84e-07,27;UBERON:0002100,7.73e-07,199;UBERON:0000948,8.96e-07,24;UBERON:0005498,8.96e-07,24;UBERON:0004140,8.96e-07,24;UBERON:0009881,8.96e-07,24;UBERON:0004141,8.96e-07,24;UBERON:0003084,8.96e-07,24;UBERON:0007005,8.96e-07,24;UBERON:0004139,8.96e-07,24;UBERON:0004291,8.96e-07,24 | |||
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| |||
|short_description=p2@JAM3 | |||
}} |
Latest revision as of 20:21, 16 September 2015
Short description: | p2@JAM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JAM3_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000441717, ENST00000531698, ENST00000532252, ENST00000534549_5end |
EntrezGene: | JAM3 |
HGNC: | 15532 |
UniProt: | B3KWG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.09e-17 | 58 |
myoblast | 3.09e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.09e-17 | 58 |
mesodermal cell | 7.97e-17 | 121 |
muscle cell | 9.26e-17 | 55 |
electrically responsive cell | 3.64e-16 | 61 |
electrically active cell | 3.64e-16 | 61 |
smooth muscle cell | 2.31e-13 | 43 |
smooth muscle myoblast | 2.31e-13 | 43 |
fibroblast | 1.41e-12 | 76 |
vascular associated smooth muscle cell | 1.58e-12 | 32 |
embryonic cell | 5.17e-07 | 250 |