FFCP PHASE1:Hg19::chr8:117879290..117879301,-: Difference between revisions
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|id=chr8:117879290..117879301,-
|short_description=p36@RAD21
|description=CAGE_peak_36_at_RAD21_5end
|association_with_transcript=-60bp_to_ENST00000519469_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5885 | |EntrezGene=5885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |HGNC=9811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_ENST00000519469_5end | |||
|cluster_id=chr8:117879290..117879301,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_36_at_RAD21_5end | |||
|id=chr8:117879290..117879301,- | |||
|ontology_enrichment_celltype=CL:0000163!9.21e-19!9;CL:0002274!1.62e-15!5;CL:0000457!1.62e-15!5;CL:0002191!1.62e-15!5;CL:0000097!1.62e-15!5;CL:0000831!1.62e-15!5;CL:0002028!1.62e-15!5;CL:0002097!2.27e-10!2;CL:0000767!2.05e-07!3;CL:0000174!2.47e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.21e-21;5!CL:0000163;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.21e-21,5;CL:0002028,4.21e-21,5;CL:0000163,2.19e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!3.91e-19!1;DOID:3350!2.99e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002369!2.47e-07!3;UBERON:0001235!2.47e-07!3;UBERON:0006858!2.47e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p36@RAD21 | |||
}} | }} |
Latest revision as of 18:53, 15 September 2015
Short description: | p36@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_RAD21_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -60bp_to_ENST00000519469_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.21e-21 | 5 |
basophil mast progenitor cell | 4.21e-21 | 5 |
endocrine cell | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.00e-08 | 14 |