FFCP PHASE1:Hg19::chr11:111741994..111742058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15672 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H6U8 | |||
|association_with_transcript=0bp_to_ENST00000398006,ENST00000530723,NM_001077691,NM_001077692,uc001ply.2,uc001plz.2_5end | |||
|cluster_id=chr11:111741994..111742058,- | |||
|description=CAGE_peak_4_at_ALG9_5end | |||
|id=chr11:111741994..111742058,- | |||
|ontology_enrichment_celltype=CL:0000838!5.55e-15!52;CL:0000542!1.34e-14!53;CL:0000051!1.34e-14!53;CL:0000945!2.30e-08!24;CL:0000826!2.30e-08!24;CL:0000084!7.84e-07!25;CL:0000827!7.84e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.20e-08;53!CL:0000945;4.11e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.81e-15,52;CL:0000542,4.51e-15,53;CL:0000051,4.51e-15,53;CL:0000945,1.03e-08,24;CL:0000826,1.03e-08,24;CL:0000084,5.97e-07,25;CL:0000827,5.97e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.20e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!8.24e-10!34;UBERON:0002780!8.49e-10!41;UBERON:0001890!8.49e-10!41;UBERON:0006240!8.49e-10!41;UBERON:0000924!2.09e-09!173;UBERON:0006601!2.09e-09!173;UBERON:0001869!2.26e-09!32;UBERON:0002791!2.41e-09!33;UBERON:0001049!2.59e-09!57;UBERON:0005068!2.59e-09!57;UBERON:0006241!2.59e-09!57;UBERON:0007135!2.59e-09!57;UBERON:0003080!3.62e-09!42;UBERON:0004121!3.86e-09!169;UBERON:0002616!9.11e-09!59;UBERON:0002020!1.98e-08!34;UBERON:0003528!1.98e-08!34;UBERON:0001950!2.64e-08!20;UBERON:0002619!1.08e-07!22;UBERON:0000956!1.87e-07!25;UBERON:0000203!1.87e-07!25;UBERON:0000955!2.92e-07!69;UBERON:0006238!2.92e-07!69;UBERON:0007023!4.44e-07!115;UBERON:0000073!4.77e-07!94;UBERON:0001016!4.77e-07!94;UBERON:0001017!5.59e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.90e-08;34!UBERON:0001869;5.94e-08;32!UBERON:0001950;7.31e-08;20!UBERON:0002791;8.60e-08;32!UBERON:0002780;2.72e-07;41!UBERON:0001890;2.72e-07;41!UBERON:0003528;3.57e-07;34!UBERON:0002020;3.57e-07;34!UBERON:0002619;3.64e-07;22!UBERON:0000956;7.37e-07;25!UBERON:0000203;7.37e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.93e-10,56;UBERON:0005068,4.93e-10,56;UBERON:0006241,4.93e-10,56;UBERON:0007135,4.93e-10,56;UBERON:0002780,7.87e-10,41;UBERON:0001890,7.87e-10,41;UBERON:0003080,7.87e-10,41;UBERON:0006240,7.87e-10,41;UBERON:0000073,9.05e-10,53;UBERON:0002616,9.05e-10,53;UBERON:0001893,1.18e-09,34;UBERON:0004121,2.75e-09,171;UBERON:0000924,2.75e-09,171;UBERON:0006601,2.75e-09,171;UBERON:0001869,3.31e-09,32;UBERON:0002791,5.01e-09,32;UBERON:0001016,2.18e-08,89;UBERON:0003528,2.84e-08,34;UBERON:0002020,2.84e-08,34;UBERON:0001950,3.42e-08,20;UBERON:0000955,7.62e-08,68;UBERON:0006238,7.62e-08,68;UBERON:0001017,1.16e-07,81;UBERON:0002619,1.80e-07,22;UBERON:0007023,2.85e-07,114;UBERON:0000956,2.97e-07,25;UBERON:0000203,2.97e-07,25;UBERON:0010371,4.86e-07,104 | |||
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| |||
|short_description=p4@ALG9 | |||
}} |
Latest revision as of 03:18, 25 September 2015
Short description: | p4@ALG9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALG9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398006, ENST00000530723, NM_001077691, NM_001077692, uc001ply.2, uc001plz.2_5end |
EntrezGene: | ALG9 |
HGNC: | 15672 |
UniProt: | Q9H6U8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.81e-15 | 52 |
lymphocyte | 4.51e-15 | 53 |
common lymphoid progenitor | 4.51e-15 | 53 |
lymphocyte of B lineage | 1.03e-08 | 24 |
pro-B cell | 1.03e-08 | 24 |
T cell | 5.97e-07 | 25 |
pro-T cell | 5.97e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.93e-10 | 56 |
neural rod | 4.93e-10 | 56 |
future spinal cord | 4.93e-10 | 56 |
neural keel | 4.93e-10 | 56 |
regional part of forebrain | 7.87e-10 | 41 |
forebrain | 7.87e-10 | 41 |
anterior neural tube | 7.87e-10 | 41 |
future forebrain | 7.87e-10 | 41 |
regional part of nervous system | 9.05e-10 | 53 |
regional part of brain | 9.05e-10 | 53 |
telencephalon | 1.18e-09 | 34 |
ectoderm-derived structure | 2.75e-09 | 171 |
ectoderm | 2.75e-09 | 171 |
presumptive ectoderm | 2.75e-09 | 171 |
cerebral hemisphere | 3.31e-09 | 32 |
regional part of telencephalon | 5.01e-09 | 32 |
nervous system | 2.18e-08 | 89 |
brain grey matter | 2.84e-08 | 34 |
gray matter | 2.84e-08 | 34 |
neocortex | 3.42e-08 | 20 |
brain | 7.62e-08 | 68 |
future brain | 7.62e-08 | 68 |
central nervous system | 1.16e-07 | 81 |
regional part of cerebral cortex | 1.80e-07 | 22 |
adult organism | 2.85e-07 | 114 |
cerebral cortex | 2.97e-07 | 25 |
pallium | 2.97e-07 | 25 |
ecto-epithelium | 4.86e-07 | 104 |