FFCP PHASE1:Hg19::chr11:108094520..108094540,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:108094520..108094540,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_at_chr11:108094520..108094540,+ | |||
|id=chr11:108094520..108094540,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.53e-29!53;CL:0000051!4.53e-29!53;CL:0000838!2.05e-28!52;CL:0000037!7.93e-24!172;CL:0000566!7.93e-24!172;CL:0000738!8.18e-24!140;CL:0000791!2.87e-23!18;CL:0000789!2.87e-23!18;CL:0002420!2.87e-23!18;CL:0002419!2.87e-23!18;CL:0000790!2.87e-23!18;CL:0000988!3.75e-21!182;CL:0002032!6.01e-21!165;CL:0000837!6.01e-21!165;CL:0002031!8.26e-19!124;CL:0002087!2.33e-18!119;CL:0000084!1.48e-16!25;CL:0000827!1.48e-16!25;CL:0000625!8.41e-16!11;CL:0000945!4.92e-10!24;CL:0000826!4.92e-10!24;CL:0000236!1.21e-08!14;CL:0000624!3.38e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.74e-44;18!CL:0000789;6.74e-44;18!CL:0002419;6.74e-44;18!CL:0000625;8.84e-36;11!CL:0000084;2.23e-30;25!CL:0000542;1.88e-15;53!CL:0000624;4.41e-13;6!CL:0000623;7.78e-11;3!CL:0000226;2.31e-10;3!CL:0000842;2.31e-10;3!CL:0000767;1.48e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.09e-44,18;CL:0000789,7.09e-44,18;CL:0002420,7.09e-44,18;CL:0002419,7.09e-44,18;CL:0000790,7.09e-44,18;CL:0000625,9.03e-36,11;CL:0000084,2.31e-30,25;CL:0000827,2.31e-30,25;CL:0000838,3.18e-27,52;CL:0000542,1.37e-26,53;CL:0000051,1.37e-26,53;CL:0000037,3.60e-15,168;CL:0002087,1.90e-14,115;CL:0000738,2.09e-14,136;CL:0000988,6.02e-14,177;CL:0000624,4.53e-13,6;CL:0002032,7.75e-13,161;CL:0000837,7.75e-13,161;CL:0000623,8.05e-11,3;CL:0000825,8.05e-11,3;CL:0000226,2.24e-10,3;CL:0000842,2.24e-10,3;CL:0002031,3.70e-10,120;CL:0000767,8.56e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.74e-44;18!CL:0000051;1.88e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.19e-12!15;UBERON:0000179!8.19e-12!15;UBERON:0000463!8.19e-12!15;UBERON:0007023!1.13e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.44e-28;15!UBERON:0000179;5.44e-28;15!UBERON:0000463;5.44e-28;15!UBERON:0002390;1.78e-14;32!UBERON:0002193;6.36e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.08e-28,15;UBERON:0000179,5.08e-28,15;UBERON:0000463,5.08e-28,15;UBERON:0002370,4.76e-07,4;UBERON:0005058,4.76e-07,4;UBERON:0009113,4.76e-07,4;UBERON:0003295,4.76e-07,4;UBERON:0005562,4.76e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.96682138424452,5.75744097145819,1.85779347979291,0,0,0,0.697204805222715,0.853015394924529,0,1.66198622559563,0.802177789880567,1.73608696572681,0.223915474239924,0.647787332037959,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0,0,3.51992488922645,2.18455444504853,1.77901850772711,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0,1.14681968437569,0,0,1.05353633910031,7.08155172409799,4.71612915298998,2.46721798799411,0.83593247695339,4.23698946623668,3.78758244587787,0,1.44833593950726,0.294605907474837,0.886135578334485,0.541607727530031,0.384273959177026,0.650296737799391,2.63100647365882,1.93445012450094,7.82468331484642,12.159498179289,23.8111336999845,2.09071047609954,3.96582699441482,3.44898444241729,4.46715679127419,6.07247260846807,13.3797474016121,11.7195021694155,17.1081368000707,12.9494602406885,14.7184602827581,13.742379920758,13.969857870597,7.39015197228942,12.2980113367087,6.15112450302067,5.64815175142916,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0.300343057843917,0.571652865261156,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,16.7476146171638,5.60631694634745,7.57223914050515,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85718499266972,4.52999821719095,4.05564719653088,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,5.35246044999663,2.84823593587081,5.71756261098694,6.9931586424653,5.83625980073446,6.48037724685738,3.17250070517708,0,0,0,0.185803175125719,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.38141957765574,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15256213890485,0.225595660617181,0.19606253431774,0.503464760927528,1.51802986179348,8.42363868596007,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97022049798414,0.170388021785422,0,0.146552233678082,0,0.258565912723101,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,1.48849806543585,0,0.60896299190448,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0.303298235083296,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0.939839179798536,0.386747327841463,0,0,0,0,0,1.83491713361816,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,1.35636710655613,1.05527014302958,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,1.01028079521881,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,1.40891655513718,0.320568492303233 | |||
|short_description=p@chr11:108094520..108094540,+ | |||
}} |
Latest revision as of 17:52, 23 July 2015
Short description: | p@chr11:108094520..108094540, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:108094520..108094540, + |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.09e-44 | 18 |
alpha-beta T cell | 7.09e-44 | 18 |
immature T cell | 7.09e-44 | 18 |
mature T cell | 7.09e-44 | 18 |
immature alpha-beta T cell | 7.09e-44 | 18 |
CD8-positive, alpha-beta T cell | 9.03e-36 | 11 |
T cell | 2.31e-30 | 25 |
pro-T cell | 2.31e-30 | 25 |
lymphoid lineage restricted progenitor cell | 3.18e-27 | 52 |
lymphocyte | 1.37e-26 | 53 |
common lymphoid progenitor | 1.37e-26 | 53 |
hematopoietic stem cell | 3.60e-15 | 168 |
nongranular leukocyte | 1.90e-14 | 115 |
leukocyte | 2.09e-14 | 136 |
hematopoietic cell | 6.02e-14 | 177 |
CD4-positive, alpha-beta T cell | 4.53e-13 | 6 |
hematopoietic oligopotent progenitor cell | 7.75e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.75e-13 | 161 |
natural killer cell | 8.05e-11 | 3 |
pro-NK cell | 8.05e-11 | 3 |
single nucleate cell | 2.24e-10 | 3 |
mononuclear cell | 2.24e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 3.70e-10 | 120 |
basophil | 8.56e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.08e-28 | 15 |
haemolymphatic fluid | 5.08e-28 | 15 |
organism substance | 5.08e-28 | 15 |
thymus | 4.76e-07 | 4 |
hemolymphoid system gland | 4.76e-07 | 4 |
thymic region | 4.76e-07 | 4 |
pharyngeal gland | 4.76e-07 | 4 |
thymus primordium | 4.76e-07 | 4 |