FFCP PHASE1:Hg19::chr11:108094037..108094072,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=795 | |||
|TSSclassifier=strong | |||
|UniProt=Q6P7P1 | |||
|association_with_transcript=-183bp_to_ENST00000526567,uc001pkc.1_5end | |||
|cluster_id=chr11:108094037..108094072,+ | |||
|coexpression_cluster_id=C3081 | |||
|description=CAGE_peak_2_at_ATM_5end | |||
|id=chr11:108094037..108094072,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.76e-15!53;CL:0000051!9.76e-15!53;CL:0000838!1.69e-14!52;CL:0000791!7.36e-10!18;CL:0000789!7.36e-10!18;CL:0002420!7.36e-10!18;CL:0002419!7.36e-10!18;CL:0000790!7.36e-10!18;CL:0000625!5.93e-08!11;CL:0000945!6.80e-08!24;CL:0000826!6.80e-08!24;CL:0002087!7.34e-08!119;CL:0000236!2.38e-07!14;CL:0000738!3.14e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.89e-10;18!CL:0000789;1.89e-10;18!CL:0002419;1.89e-10;18!CL:0000542;6.06e-10;53!CL:0000625;3.05e-08;11!CL:0000236;7.59e-08;13!CL:0000945;1.40e-07;24!CL:0000084;1.41e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.97e-15,53;CL:0000051,1.97e-15,53;CL:0000838,3.47e-15,52;CL:0000791,3.55e-10,18;CL:0000789,3.55e-10,18;CL:0002420,3.55e-10,18;CL:0002419,3.55e-10,18;CL:0000790,3.55e-10,18;CL:0002087,2.65e-08,115;CL:0000625,3.38e-08,11;CL:0000945,4.72e-08,24;CL:0000826,4.72e-08,24;CL:0000738,1.08e-07,136;CL:0000236,1.43e-07,14;CL:0000084,4.90e-07,25;CL:0000827,4.90e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.89e-10;18!CL:0000051;6.06e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.89e-17!115;UBERON:0001049!1.21e-09!57;UBERON:0005068!1.21e-09!57;UBERON:0006241!1.21e-09!57;UBERON:0007135!1.21e-09!57;UBERON:0002780!6.82e-08!41;UBERON:0001890!6.82e-08!41;UBERON:0006240!6.82e-08!41;UBERON:0003080!9.49e-08!42;UBERON:0001017!1.26e-07!82;UBERON:0000955!2.19e-07!69;UBERON:0006238!2.19e-07!69;UBERON:0002616!2.57e-07!59;UBERON:0005743!6.78e-07!86;UBERON:0000073!6.98e-07!94;UBERON:0001016!6.98e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.50e-17,114;UBERON:0001049,9.89e-10,56;UBERON:0005068,9.89e-10,56;UBERON:0006241,9.89e-10,56;UBERON:0007135,9.89e-10,56;UBERON:0000073,1.02e-08,53;UBERON:0002616,1.02e-08,53;UBERON:0002780,8.20e-08,41;UBERON:0001890,8.20e-08,41;UBERON:0003080,8.20e-08,41;UBERON:0006240,8.20e-08,41;UBERON:0001016,1.47e-07,89;UBERON:0001017,1.59e-07,81;UBERON:0000955,2.50e-07,68;UBERON:0006238,2.50e-07,68;UBERON:0002346,6.72e-07,86 | |||
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| |||
|short_description=p2@ATM | |||
}} |
Latest revision as of 23:14, 24 September 2015
Short description: | p2@ATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATM_5end |
Coexpression cluster: | C3081_Mast_CD19_pituitary_CD4_CD8_Peripheral_spinal |
Association with transcript: | -183bp_to_ENST00000526567, uc001pkc.1_5end |
EntrezGene: | ATM |
HGNC: | 795 |
UniProt: | Q6P7P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.97e-15 | 53 |
common lymphoid progenitor | 1.97e-15 | 53 |
lymphoid lineage restricted progenitor cell | 3.47e-15 | 52 |
mature alpha-beta T cell | 3.55e-10 | 18 |
alpha-beta T cell | 3.55e-10 | 18 |
immature T cell | 3.55e-10 | 18 |
mature T cell | 3.55e-10 | 18 |
immature alpha-beta T cell | 3.55e-10 | 18 |
nongranular leukocyte | 2.65e-08 | 115 |
CD8-positive, alpha-beta T cell | 3.38e-08 | 11 |
lymphocyte of B lineage | 4.72e-08 | 24 |
pro-B cell | 4.72e-08 | 24 |
leukocyte | 1.08e-07 | 136 |
B cell | 1.43e-07 | 14 |
T cell | 4.90e-07 | 25 |
pro-T cell | 4.90e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.50e-17 | 114 |
neural tube | 9.89e-10 | 56 |
neural rod | 9.89e-10 | 56 |
future spinal cord | 9.89e-10 | 56 |
neural keel | 9.89e-10 | 56 |
regional part of nervous system | 1.02e-08 | 53 |
regional part of brain | 1.02e-08 | 53 |
regional part of forebrain | 8.20e-08 | 41 |
forebrain | 8.20e-08 | 41 |
anterior neural tube | 8.20e-08 | 41 |
future forebrain | 8.20e-08 | 41 |
nervous system | 1.47e-07 | 89 |
central nervous system | 1.59e-07 | 81 |
brain | 2.50e-07 | 68 |
future brain | 2.50e-07 | 68 |
neurectoderm | 6.72e-07 | 86 |