FFCP PHASE1:Hg19::chr10:91011548..91011636,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6617 | |||
|TSSclassifier=strong | |||
|UniProt=F5H6K2 | |||
|association_with_transcript=-16bp_to_ENST00000542307_5end | |||
|cluster_id=chr10:91011548..91011636,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_1_at_LIPA_5end | |||
|id=chr10:91011548..91011636,- | |||
|ontology_enrichment_celltype=CL:0002194!7.68e-19!63;CL:0000576!7.68e-19!63;CL:0000040!7.68e-19!63;CL:0000559!7.68e-19!63;CL:0002009!8.01e-17!65;CL:0002057!1.28e-16!42;CL:0000839!1.95e-15!70;CL:0000557!6.48e-15!71;CL:0000860!4.93e-14!45;CL:0000766!8.24e-14!76;CL:0000723!9.57e-12!436;CL:0000048!1.14e-11!430;CL:0002087!1.20e-10!119;CL:0000034!2.69e-10!444;CL:0002320!3.65e-09!365;CL:0000134!8.62e-09!358;CL:0002371!1.27e-08!591;CL:0002031!2.80e-08!124;CL:0000219!1.53e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.21e-13;39!CL:0000234;3.21e-13;39!CL:0000860;6.58e-12;33!CL:0002057;6.58e-12;33!CL:0000576;8.81e-12;48!CL:0000766;9.65e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.54e-22,59;CL:0000576,2.54e-22,59;CL:0000040,2.54e-22,59;CL:0000559,2.54e-22,59;CL:0000473,1.62e-20,48;CL:0000234,1.62e-20,48;CL:0002009,5.70e-20,61;CL:0000839,2.98e-18,66;CL:0000557,1.22e-17,67;CL:0000860,1.28e-16,42;CL:0002057,1.28e-16,42;CL:0000766,2.80e-16,72;CL:0000723,1.36e-12,433;CL:0000048,1.62e-12,427;CL:0002087,3.27e-12,115;CL:0000034,4.41e-11,441;CL:0002320,9.30e-10,361;CL:0002031,1.42e-09,120;CL:0000134,2.25e-09,354;CL:0000219,4.66e-08,386;CL:0000738,1.21e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.62e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.09e-18!112;UBERON:0002390!5.95e-17!102;UBERON:0003061!5.95e-17!102;UBERON:0002405!1.22e-15!115;UBERON:0002371!3.55e-15!80;UBERON:0002204!1.00e-14!167;UBERON:0004765!1.20e-13!101;UBERON:0001434!1.20e-13!101;UBERON:0001474!6.37e-13!86;UBERON:0002384!1.89e-08!375;UBERON:0000062!2.28e-08!511;UBERON:0003081!2.53e-08!216;UBERON:0000467!1.41e-07!625;UBERON:0000480!2.44e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.61e-20,108;UBERON:0002390,2.75e-19,98;UBERON:0003061,2.75e-19,98;UBERON:0002405,7.98e-19,93;UBERON:0002371,1.01e-17,76;UBERON:0004765,5.35e-17,90;UBERON:0002204,7.66e-17,167;UBERON:0001434,6.35e-16,100;UBERON:0001474,4.24e-15,82;UBERON:0000926,1.03e-11,315;UBERON:0004120,1.03e-11,315;UBERON:0006603,1.03e-11,315;UBERON:0003081,6.93e-10,203;UBERON:0002384,5.19e-09,371 | |||
|phase1_expression=55.9569408153314,80.2876964591187,57.6503512752522,36.0263874071269,52.2944480479927,59.3190196388251,43.0609792886128,82.123583545488,132.421113497318,25.5563293961569,6.97801167972428,94.5851141323646,74.9098218168808,75.0024098937883,51.3665932378269,42.3564842264618,21.6970030088632,18.9880623500717,19.5173119516203,46.9091231272562,27.1320919354856,21.31492106051,43.2216340567896,25.8692663387751,34.0220553301916,17.269429699037,14.2855025642906,16.450553294559,82.9998624151187,62.1803624917485,59.9138397233214,30.3409004078046,34.939886578277,28.4710587828427,39.1984034936326,28.7181849624591,53.4352799589422,87.5312745480366,78.4128789608254,41.4490763067277,542.995025031817,855.727065622144,549.666261331354,55.8329236913528,60.8380269338983,66.9532008878373,57.1775430787984,56.741168547012,76.8071799819857,70.772328511249,90.6808901113016,134.085424346828,66.1911707014308,63.257498991215,85.3186865544353,70.4026349889342,72.593035915387,90.338840746924,58.4620234428424,70.2834569296645,65.2123868315022,64.6508548365964,91.553818848329,95.4743441193235,64.1362417369171,56.1711372444228,61.0365804015663,69.5958802761179,93.345442397216,127.489851841903,70.8317418081041,68.499640293687,86.0777693839206,162.666570460195,186.028762469413,153.050811221114,83.1231870484064,119.540806701839,64.7724114389233,60.7077144168859,109.006339105101,70.1430350456194,56.3187982276233,56.7984155712617,61.3761385165853,62.7293427172766,64.463753912798,56.9004915554938,65.4434424057013,56.2891715175865,21.630092826159,20.5533016279829,28.6704921093922,39.6513985737078,36.4330565937998,45.3020625813133,30.0965948274165,23.1876350022007,23.6441723849436,33.1029260873543,43.6735837289011,38.8227200702481,19.4826728407911,50.3575265120985,37.4149502493043,35.0023553442121,33.0380713793319,22.5440722717188,29.913649938772,16.772666269575,23.766101529583,29.5599147449754,42.8548167538355,33.1750626831244,34.4967228556423,33.0863280676893,32.9569624497652,35.3936268847109,31.1214221183989,47.1476813199663,37.7628403236723,40.8694379112801,49.5392141765872,57.8499482417971,61.2160560106495,51.3806636935517,48.4465518183417,30.0394047404851,23.5347372289486,26.9373391222006,80.4562658836074,62.3751799524382,75.4389114876829,30.3608888003036,27.072247174338,29.1141503111256,47.717156823066,18.9787599418028,56.7208902984407,43.9024206975877,49.0996452024575,39.2282331115649,27.3221466219407,34.4829531789519,4486.21862248869,4350.45735668489,3129.56447469305,54.375862341618,67.4953994720551,57.5759127060826,19.0811911072037,27.527507043396,17.3570250803797,17.5245461996443,7.97048928798821,12.9305479711832,12.3307030256718,48.0655172054952,62.2590959701743,51.5469743657592,47.9366887359885,31.9314284401775,40.7583636105443,15.0741862941806,20.253548697044,31.5228040842802,27.6171128330189,29.8420423280804,6.13266549863533,7.59412527654503,12.4577185872677,3.9534125230819,11.6334079244498,36.1958063278303,42.7395878457974,74.2054798354437,89.3761970489227,229.469296599051,63.4856404135059,39.2474320099615,13.8773694448616,26.3934276806361,66.2879505401502,56.982614285478,53.9424280274414,134.708110603989,68.5649350131199,18.0427502512023,94.5845032795871,50.2015202959115,82.9440177062496,53.3152623842693,41.4394737582417,40.7307339436521,94.7275354622705,46.1857033092248,67.8850382324779,45.144108576718,25.2212267864128,91.0161361938027,31.6191982399145,47.6391202490007,37.4104374417173,64.2788747923304,21.9488810440419,24.8255114597206,31.8504684881985,56.7160915800105,57.9428523275024,45.0606090407177,81.8057138475909,105.031883629541,58.9460467243871,96.6152025171109,85.4276370561997,74.4303625183984,43.9440893277006,54.0208276882405,58.0834860432909,64.9817148411624,71.3569280958395,28.4120917001946,59.0070861240497,66.0952117818475,66.5500534241637,61.0893788178578,5.12289565744301,4.5060121229305,3.60201222895507,4.66474747569167,3.02785021050754,12.774207567654,43.8058690523485,37.3079744151873,19.3388889893473,65.0115099244771,135.713342553882,32.2977564108774,32.3682604949955,30.6084007952022,35.9558351107604,31.5925193933989,33.4551572946646,34.7864775053224,33.5538705364342,26.9323009862473,78.2444781902127,11.2193419042757,62.5592497223728,39.6923520740963,54.5046649733873,30.4676437170064,73.8487383351755,14.5682822806835,45.3827338224089,77.8917858755306,79.7884574920708,28.1004383144049,50.3650151782271,26.2951184250224,19.2226900133092,43.6772609817423,41.8560891873293,45.0969275353049,65.9836861605318,47.6409277611544,35.1868989558224,49.4660795809955,15.0138835612262,21.4621540523718,882.195532811145,1592.86703280279,867.560094279307,90.9218189671737,108.852419072861,65.2165447314978,31.7037170368083,45.0482604696641,32.9709104082082,158.144899364598,80.7404139901283,13.4763275101502,13.2590357143605,14.2653949771809,68.6412237298347,80.9815462183549,93.7739577680376,58.1646316477198,74.1386222390963,91.6046326423948,113.187267321709,60.1022612091133,54.0590485353267,46.7898263537661,32.705744086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| |||
|short_description=p1@LIPA | |||
}} |
Latest revision as of 21:49, 19 September 2015
Short description: | p1@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LIPA_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -16bp_to_ENST00000542307_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | F5H6K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.54e-22 | 59 |
monocyte | 2.54e-22 | 59 |
monoblast | 2.54e-22 | 59 |
promonocyte | 2.54e-22 | 59 |
defensive cell | 1.62e-20 | 48 |
phagocyte | 1.62e-20 | 48 |
macrophage dendritic cell progenitor | 5.70e-20 | 61 |
myeloid lineage restricted progenitor cell | 2.98e-18 | 66 |
granulocyte monocyte progenitor cell | 1.22e-17 | 67 |
classical monocyte | 1.28e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-16 | 42 |
myeloid leukocyte | 2.80e-16 | 72 |
somatic stem cell | 1.36e-12 | 433 |
multi fate stem cell | 1.62e-12 | 427 |
nongranular leukocyte | 3.27e-12 | 115 |
stem cell | 4.41e-11 | 441 |
connective tissue cell | 9.30e-10 | 361 |
hematopoietic lineage restricted progenitor cell | 1.42e-09 | 120 |
mesenchymal cell | 2.25e-09 | 354 |
motile cell | 4.66e-08 | 386 |
leukocyte | 1.21e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.61e-20 | 108 |
hematopoietic system | 2.75e-19 | 98 |
blood island | 2.75e-19 | 98 |
immune system | 7.98e-19 | 93 |
bone marrow | 1.01e-17 | 76 |
skeletal element | 5.35e-17 | 90 |
musculoskeletal system | 7.66e-17 | 167 |
skeletal system | 6.35e-16 | 100 |
bone element | 4.24e-15 | 82 |
mesoderm | 1.03e-11 | 315 |
mesoderm-derived structure | 1.03e-11 | 315 |
presumptive mesoderm | 1.03e-11 | 315 |
lateral plate mesoderm | 6.93e-10 | 203 |
connective tissue | 5.19e-09 | 371 |