FFCP PHASE1:Hg19::chr10:88719078..88719087,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6623 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11141 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_ENST00000483064_5end | |||
|cluster_id=chr10:88719078..88719087,+ | |||
|description=CAGE_peak_4_at_SNCG_5end | |||
|id=chr10:88719078..88719087,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002554;6.35e-08;2!CL:0000077;7.88e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,6.58e-08,2;CL:0000077,8.12e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.85e-15;8!DOID:8692;2.30e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.64e-15,8;DOID:8692,3.77e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;6.35e-08;2!UBERON:0002148;6.35e-08;2!UBERON:0006331;6.35e-08;2!UBERON:0009662;6.35e-08;2!UBERON:0003022;6.35e-08;2!UBERON:0002421;6.35e-08;2!UBERON:0002600;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,4.38e-08,2;UBERON:0006331,4.38e-08,2;UBERON:0009662,4.38e-08,2;UBERON:0001954,5.37e-08,2;UBERON:0003022,5.37e-08,2;UBERON:0002421,5.37e-08,2;UBERON:0002600,5.37e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,1.43723628363248,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0.900273288253207,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,1.74306691720059,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17609260842864,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,1.80476528493745,1.56850027454192,1.1747511088309,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0.124252535565433,2.59263438078475,0.67952103036807,1.04602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,1.80996138906171,0.26446520348538,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0.886068179966986,0.244052529803926,0.250381861413,0,0.443716206147409,0.18628920882415,0,0.37494122388632,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0,0,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0.706756583783524,0,1.52048196587765,0,1.0362910251936,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,1.41696576325585,0,0,0,0.207471757392654,0.161475645631851,0,2.74813611802872,0,0,0.808679663052368,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.430227358820278,0.473328002922261,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0.942706188406504,0.392616934229891,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0.26721740526556,0.36757959813938,0,0,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@SNCG | |||
}} |
Latest revision as of 18:14, 19 September 2015
Short description: | p4@SNCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNCG_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000483064_5end |
EntrezGene: | SNCG |
HGNC: | 11141 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 6.58e-08 | 2 |
mesothelial cell | 8.12e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 4.38e-08 | 2 |
brainstem nucleus | 4.38e-08 | 2 |
hindbrain nucleus | 4.38e-08 | 2 |
Ammon's horn | 5.37e-08 | 2 |
lobe parts of cerebral cortex | 5.37e-08 | 2 |
hippocampal formation | 5.37e-08 | 2 |
limbic lobe | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.64e-15 | 8 |
myeloid leukemia | 3.77e-07 | 31 |