FFCP PHASE1:Hg19::chr8:104512701..104512710,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:104512701..104512710,+
|short_description=p23@RIMS2
|description=CAGE_peak_23_at_RIMS2_5end
|association_with_transcript=-265bp_to_ENST00000504942,NM_00110...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9699 | |EntrezGene=9699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |HGNC=17283 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | |UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | ||
|association_with_transcript=-265bp_to_ENST00000504942,NM_001100117,uc003ylp.2_5end | |||
|cluster_id=chr8:104512701..104512710,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_23_at_RIMS2_5end | |||
|id=chr8:104512701..104512710,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.01e-55;3 | |||
|ontology_enrichment_disease=DOID:3095!7.23e-07!22;DOID:2994!7.23e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-44!57;UBERON:0005068!1.14e-44!57;UBERON:0006241!1.14e-44!57;UBERON:0007135!1.14e-44!57;UBERON:0000073!2.05e-40!94;UBERON:0001016!2.05e-40!94;UBERON:0001017!2.30e-40!82;UBERON:0002616!3.61e-40!59;UBERON:0005743!6.40e-40!86;UBERON:0002780!1.70e-38!41;UBERON:0001890!1.70e-38!41;UBERON:0006240!1.70e-38!41;UBERON:0000955!1.90e-38!69;UBERON:0006238!1.90e-38!69;UBERON:0003080!2.24e-37!42;UBERON:0003075!1.36e-32!86;UBERON:0007284!1.36e-32!86;UBERON:0002346!1.36e-30!90;UBERON:0002619!7.23e-30!22;UBERON:0002020!1.42e-29!34;UBERON:0003528!1.42e-29!34;UBERON:0001950!1.96e-29!20;UBERON:0001893!3.90e-29!34;UBERON:0001869!9.05e-29!32;UBERON:0003056!1.16e-28!61;UBERON:0002791!1.65e-27!33;UBERON:0000956!9.61e-26!25;UBERON:0000203!9.61e-26!25;UBERON:0007023!1.32e-22!115;UBERON:0000033!3.36e-21!123;UBERON:0000153!1.07e-20!129;UBERON:0007811!1.07e-20!129;UBERON:0004121!1.44e-20!169;UBERON:0000924!9.16e-20!173;UBERON:0006601!9.16e-20!173;UBERON:0000200!8.76e-13!6;UBERON:0002021!4.01e-11!5;UBERON:0001894!4.05e-11!7;UBERON:0006222!4.05e-11!7;UBERON:0001872!7.49e-11!5;UBERON:0003296!2.37e-09!4;UBERON:0010133!2.37e-09!4;UBERON:0002680!5.07e-09!9;UBERON:0001895!5.07e-09!9;UBERON:0010092!5.07e-09!9;UBERON:0003076!1.07e-08!15;UBERON:0003057!1.07e-08!15;UBERON:0004733!1.09e-08!12;UBERON:0002028!1.09e-08!12;UBERON:0007277!1.09e-08!12;UBERON:0000025!1.25e-08!194;UBERON:0004732!6.44e-08!13;UBERON:0000988!1.61e-07!3;UBERON:0002771!1.91e-07!3;UBERON:0004111!8.43e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.47e-28;6!UBERON:0002619;1.60e-19;22!UBERON:0002680;7.22e-19;9!UBERON:0001895;7.22e-19;9!UBERON:0000956;2.73e-17;25!UBERON:0000203;2.73e-17;25!UBERON:0002021;2.70e-15;5!UBERON:0004733;2.51e-14;12!UBERON:0002028;2.51e-14;12!UBERON:0001950;5.46e-14;20!UBERON:0000073;6.07e-14;53!UBERON:0002616;6.07e-14;53!UBERON:0004732;2.83e-13;13!UBERON:0003528;4.65e-12;34!UBERON:0002020;4.65e-12;34!UBERON:0001869;1.51e-11;32!UBERON:0001893;1.51e-11;34!UBERON:0002780;4.93e-11;41!UBERON:0001890;4.93e-11;41!UBERON:0002791;9.19e-11;32!UBERON:0001905;1.72e-10;2!UBERON:0002757;1.72e-10;2!UBERON:0010134;1.72e-10;2!UBERON:0005408;1.72e-10;2!UBERON:0001899;1.72e-10;2!UBERON:0002771;2.72e-10;2!UBERON:0001954;2.72e-10;2!UBERON:0003022;2.72e-10;2!UBERON:0006955;2.72e-10;2!UBERON:0004801;2.72e-10;2!UBERON:0002421;2.72e-10;2!UBERON:0002600;2.72e-10;2!UBERON:0000955;4.07e-10;68!UBERON:0001017;2.65e-09;75!UBERON:0001016;4.44e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.92e-28,6;UBERON:0006215,4.92e-28,6;UBERON:0000073,2.06e-26,53;UBERON:0002616,2.06e-26,53;UBERON:0001049,5.32e-25,56;UBERON:0005068,5.32e-25,56;UBERON:0006241,5.32e-25,56;UBERON:0007135,5.32e-25,56;UBERON:0000955,2.83e-20,68;UBERON:0006238,2.83e-20,68;UBERON:0002619,1.95e-19,22;UBERON:0002680,6.02e-19,9;UBERON:0001895,6.02e-19,9;UBERON:0010092,6.02e-19,9;UBERON:0000956,3.24e-17,25;UBERON:0000203,3.24e-17,25;UBERON:0001017,5.05e-17,81;UBERON:0003075,5.05e-17,82;UBERON:0007284,5.05e-17,82;UBERON:0002346,3.24e-16,86;UBERON:0001016,2.63e-15,89;UBERON:0002021,2.90e-15,5;UBERON:0002780,3.29e-15,41;UBERON:0001890,3.29e-15,41;UBERON:0003080,3.29e-15,41;UBERON:0006240,3.29e-15,41;UBERON:0004733,2.20e-14,12;UBERON:0002028,2.20e-14,12;UBERON:0007277,2.20e-14,12;UBERON:0001950,6.47e-14,20;UBERON:0002791,1.35e-13,32;UBERON:0001869,1.35e-13,32;UBERON:0010371,2.42e-13,104;UBERON:0004732,2.49e-13,13;UBERON:0003528,7.96e-13,34;UBERON:0002020,7.96e-13,34;UBERON:0001893,7.96e-13,34;UBERON:0007023,3.04e-12,114;UBERON:0003076,1.23e-11,15;UBERON:0003057,1.23e-11,15;UBERON:0001905,1.72e-10,2;UBERON:0002757,1.72e-10,2;UBERON:0010134,1.72e-10,2;UBERON:0005408,1.72e-10,2;UBERON:0001899,1.72e-10,2;UBERON:0010314,2.09e-10,132;UBERON:0006955,2.27e-10,2;UBERON:0004801,2.27e-10,2;UBERON:0001954,2.72e-10,2;UBERON:0003022,2.72e-10,2;UBERON:0002421,2.72e-10,2;UBERON:0002600,2.72e-10,2;UBERON:0003056,2.90e-10,61;UBERON:0002771,3.58e-10,2;UBERON:0004121,8.55e-08,171;UBERON:0000924,8.55e-08,171;UBERON:0006601,8.55e-08,171;UBERON:0000025,5.91e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0.868124974666461,0,0.241192877250816,6.10326945268333,4.86548743697388,1.77328571372128,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,2.05913997434357,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0.751145584238999,0,0.443716206147409,0,0.553394539744923,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0.431299245586727,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,1.41696576325585,1.75597244962866,0.615349092722265,0.252071696221718,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,0.413373593002368,0.380494861163441,0.546974809018219,0,0,0,0,0.535701835878287,3.36283722218824,0.606965604236632,0.227662191351298,0,0.115233987555779,0,0.475788130837822,0.131545547125698,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0.452888530700021,0,0,0,0,0.235676547101626,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0.407955318967927,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.535928260312357,0.829169439458779,0.310298987585686,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0.868124974666461,0,0.241192877250816,6.10326945268333,4.86548743697388,1.77328571372128,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,2.05913997434357,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0.751145584238999,0,0.443716206147409,0,0.553394539744923,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0.431299245586727,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,1.41696576325585,1.75597244962866,0.615349092722265,0.252071696221718,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,0.413373593002368,0.380494861163441,0.546974809018219,0,0,0,0,0.535701835878287,3.36283722218824,0.606965604236632,0.227662191351298,0,0.115233987555779,0,0.475788130837822,0.131545547125698,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0.452888530700021,0,0,0,0,0.235676547101626,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0.407955318967927,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.535928260312357,0.829169439458779,0.310298987585686,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p23@RIMS2 | |||
}} | }} |
Latest revision as of 00:45, 25 September 2015
Short description: | p23@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RIMS2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -265bp_to_ENST00000504942, NM_001100117, uc003ylp.2_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E9PFB6B3KX91F8WD47Q9UQ26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.27e-10 | 2 |