FFCP PHASE1:Hg19::chr10:33221480..33221527,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=117bp_to_ENST00000464001_5end | |||
|cluster_id=chr10:33221480..33221527,- | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_7_at_ITGB1_5end | |||
|id=chr10:33221480..33221527,- | |||
|ontology_enrichment_celltype=CL:0000055!1.73e-12!180;CL:0000057!1.96e-11!75;CL:0000222!8.49e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.86e-07;12!CL:0000077;4.12e-07;19!CL:0000134;9.28e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.91e-14,76;CL:0000680,8.25e-08,58;CL:0000056,8.25e-08,58;CL:0000355,8.25e-08,58;CL:0000222,2.11e-07,121;CL:0002334,2.69e-07,12;CL:0000187,6.12e-07,55;CL:0000077,6.83e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.03e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.76e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.66e-08!83;UBERON:0002329!9.66e-08!83;UBERON:0003077!9.66e-08!83;UBERON:0003059!9.66e-08!83;UBERON:0007282!9.66e-08!83;UBERON:0009618!9.66e-08!83;UBERON:0007285!9.66e-08!83;UBERON:0003102!2.16e-07!95;UBERON:0000486!3.57e-07!82;UBERON:0004290!7.39e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.46e-08,99;UBERON:0000486,1.38e-07,83;UBERON:0007524,1.91e-07,73;UBERON:0001134,1.98e-07,62;UBERON:0002036,1.98e-07,62;UBERON:0003082,1.98e-07,62;UBERON:0002329,2.18e-07,71;UBERON:0003059,2.18e-07,71;UBERON:0007282,2.18e-07,71;UBERON:0004290,2.18e-07,71;UBERON:0009618,2.18e-07,71;UBERON:0002385,3.43e-07,64;UBERON:0001015,3.43e-07,64;UBERON:0000383,3.43e-07,64;UBERON:0003077,4.55e-07,72;UBERON:0007285,4.55e-07,72 | |||
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| |||
|short_description=p7@ITGB1 | |||
}} |
Latest revision as of 00:27, 18 September 2015
Short description: | p7@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ITGB1_5end |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | 117bp_to_ENST00000464001_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.91e-14 | 76 |
muscle precursor cell | 8.25e-08 | 58 |
myoblast | 8.25e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.25e-08 | 58 |
mesodermal cell | 2.11e-07 | 121 |
preadipocyte | 2.69e-07 | 12 |
muscle cell | 6.12e-07 | 55 |
mesothelial cell | 6.83e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.46e-08 | 99 |
multilaminar epithelium | 1.38e-07 | 83 |
dense mesenchyme tissue | 1.91e-07 | 73 |
skeletal muscle tissue | 1.98e-07 | 62 |
striated muscle tissue | 1.98e-07 | 62 |
myotome | 1.98e-07 | 62 |
somite | 2.18e-07 | 71 |
presomitic mesoderm | 2.18e-07 | 71 |
presumptive segmental plate | 2.18e-07 | 71 |
dermomyotome | 2.18e-07 | 71 |
trunk paraxial mesoderm | 2.18e-07 | 71 |
muscle tissue | 3.43e-07 | 64 |
musculature | 3.43e-07 | 64 |
musculature of body | 3.43e-07 | 64 |
paraxial mesoderm | 4.55e-07 | 72 |
presumptive paraxial mesoderm | 4.55e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.64e-10 | 14 |