FFCP PHASE1:Hg19::chr10:33212555..33212600,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6153 | |||
|TSSclassifier=strong | |||
|UniProt=P05556 | |||
|association_with_transcript=64bp_to_BC113901_5end | |||
|cluster_id=chr10:33212555..33212600,- | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_9_at_ITGB1_5end | |||
|id=chr10:33212555..33212600,- | |||
|ontology_enrichment_celltype=CL:0000055!9.20e-15!180;CL:0000548!4.03e-13!679;CL:0000004!4.03e-13!679;CL:0000255!4.03e-13!679;CL:0000057!7.03e-13!75;CL:0000012!3.04e-12!682;CL:0000144!7.79e-10!625;CL:0002371!1.10e-08!591;CL:0000222!1.37e-08!119;CL:0000220!5.66e-08!246;CL:0000680!6.17e-08!57;CL:0000056!6.17e-08!57;CL:0000355!6.17e-08!57;CL:0002321!7.71e-08!248;CL:0000359!1.75e-07!32;CL:0000003!2.07e-07!722;CL:0000192!3.26e-07!42;CL:0000514!3.26e-07!42;CL:0000187!5.02e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.81e-08;12!CL:0000134;3.75e-07;55!CL:0002620;8.69e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.03e-18,76;CL:0002334,6.93e-08,12;CL:0000723,9.73e-08,433;CL:0000048,2.32e-07,427;CL:0000680,4.70e-07,58;CL:0000056,4.70e-07,58;CL:0000355,4.70e-07,58;CL:0000034,5.37e-07,441;CL:0002620,6.92e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.68e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.96e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.98e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.44e-08!83;UBERON:0002329!1.44e-08!83;UBERON:0003077!1.44e-08!83;UBERON:0003059!1.44e-08!83;UBERON:0007282!1.44e-08!83;UBERON:0009618!1.44e-08!83;UBERON:0007285!1.44e-08!83;UBERON:0003102!5.59e-08!95;UBERON:0004872!1.13e-07!84;UBERON:0004290!1.22e-07!70;UBERON:0000486!1.47e-07!82;UBERON:0001637!1.51e-07!42;UBERON:0003509!1.51e-07!42;UBERON:0004572!1.51e-07!42;UBERON:0001134!1.59e-07!61;UBERON:0002036!1.59e-07!61;UBERON:0003082!1.59e-07!61;UBERON:0002385!2.63e-07!63;UBERON:0001015!2.63e-07!63;UBERON:0000383!2.63e-07!63;UBERON:0005256!3.37e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.29e-09,99;UBERON:0007524,3.77e-07,73;UBERON:0002329,5.09e-07,71;UBERON:0003059,5.09e-07,71;UBERON:0007282,5.09e-07,71;UBERON:0004290,5.09e-07,71;UBERON:0009618,5.09e-07,71;UBERON:0000486,5.85e-07,83;UBERON:0002097,6.34e-07,41;UBERON:0001134,7.21e-07,62;UBERON:0002036,7.21e-07,62;UBERON:0003082,7.21e-07,62;UBERON:0003077,9.50e-07,72;UBERON:0007285,9.50e-07,72 | |||
|phase1_expression=3.27021082687002,12.203729861786,3.94672331468719,5.00366491765652,4.02264984984559,6.97870819280295,0,0.631719873426831,0.522371256399677,0.737201809504527,0,0.873765488520689,0,1.23766352960047,2.31978163009541,5.3786011716142,9.04041792035965,4.38186054232424,12.1983199697627,0.246242116153576,0,0,0,1.23186982565596,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0,0,0.309868802321207,0,0,0.553995408531877,0.401088894940283,0.651032612147555,1.11957737119962,0.971680998056939,0.257575567634187,1.16318591023652,0.377875943688809,0.242584061187816,0.697287110717054,1.6446715520873,0.929119112685311,1.1507695692886,0.768482119587302,0.709446689665756,1.03423704220986,1.93645405075148,1.35426486594342,1.12945403725563,0,0.449446968890169,1.22433556948361,0,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,4.93355705668593,0.56738522469114,0,2.00998932205395,2.08593167368081,0.434377689410233,3.02699751316684,0.368277635987565,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,1.17903228824749,1.43921049299656,0,0,0,1.94826728407911,0.222820913770347,1.17842362989935,0.443067789167242,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,1.06976078313403,0.434473211648397,0,4.02420515822182,1.02290049474824,2.1686349143074,0.50133791063589,2.75208386025565,2.3858578411533,4.86634870302636,1.51255707462509,2.4390233720882,1.49319135678314,0.196468613246569,0,1.48313777113772,0,0.174129737299267,1.46253756570752,0,0.571994910780128,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,1.25849830862972,1.92582629358047,0.417989933073621,2.06733407335463,1.42306505074684,2.67776490211736,0.805658634218294,0.760272105718513,1.95249646038536,0.735326160691737,0,0.446498641420399,0.673588117878509,0.450445921933289,0,0,1.09921046358244,0,0,0,7.9515512271251,4.55869841992487,2.91300197789081,12.333974692199,6.73869926176878,1.68203280042692,3.20246987189115,2.4666754841716,1.55605517699883,1.61652806483626,2.45192854670188,0,2.30470369792,0,1.24864030732128,0,3.13842229158782,0.822041490506354,1.61872944368132,0.702254033511242,1.83738754129404,0.982674538494144,1.03325781175765,2.37600571456411,6.42894016124248,0,0,1.68336113954066,1.25118519871964,1.38532057742091,1.31693286264251,1.83892677479412,1.65261864797256,1.58805056424029,3.40840307808838,7.47450860864986,8.47727604638247,9.00273288253207,1.64884046781502,3.86460810068444,2.04728541964749,6.91982962189192,2.92311015483596,4.29137416214995,2.02509777013059,1.2931684545505,8.52023022039874,1.91428986632517,2.88253006927829,0.57978255948989,3.81844568827169,1.14721838155602,0.609868530647977,0.265059536642971,0.813357600086629,0.414644220061482,1.00928340350251,0.36497735907583,1.56449532329816,10.2918550110862,0,5.10804720835177,1.44375896333917,1.8929088006375,1.01150814046861,0.482022059766964,1.8749975364507,0.653638332277218,1.18635309555548,2.56179485504312,2.15843611637881,1.15424147083917,0.738155454624648,0,0,0,0,0.982827216677626,0.590789906681404,0,0.860919069801795,1.71567810298526,1.09750285408626,0,2.31216636546751,2.68506490959736,0,0,5.77325368101093,0.811512834825538,2.34817388471643,1.58803092537181,1.38895653772983,3.99533719692656,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0,2.68771405118175,0.850650583454319,2.14940454486836,1.74380363108377,1.53353071666084,0,0.176096868026452,0.414656231081544,0.144119953416961,0,0.444485260045183,0,0,3.4214489204541,1.33675740514321,0.901029173531752,0.571652865261156,0,0.43596006883328,2.12681028880755,2.19761916788222,0,3.381211010224,3.19125739901845,2.08014873822732,0.257207374262142,0,0.266422179016099,2.43062589218851,0,0.823240336780769,0.65147236858747,1.77695974371273,0,4.22015127883421,0.871533458600294,8.59767724165691,2.43247561282381,1.00451418286425,0,2.39624855491583,3.44585807502342,0,4.77778312003011,3.49309748335652,1.79060963239896,0.448340575974109,0.985153801009636,1.07813787429759,1.02674429023799,0.254094624222463,0,0,0.335032530668698,0,0,0,0,1.10422342547226,2.00068208423871,1.08506009479894,7.69492187663986,12.4900292158013,5.20417969611984,2.57711112983969,0.902838299183157,0,0,0.664225598535437,0.921845842708516,2.95404289191482,0.391602314925481,0.343143423810856,0.206768026122887,0.431428401637234,0.640365346820666,0,3.32870879020994,0.907170879989041,4.21783273291921,3.6830873589135,7.57782254969299,3.20347873139252,5.11707249066703,6.75586468803151,1.48418066444991,4.1636617326717,4.08391968220192,1.88892458831761,3.11552657510173,2.44041794765914,0.604297247958111,5.01266175758212,5.34069735828199,1.7222167224691,5.09855270418808,2.75361271414791,0.451199612907412,4.6979355633693,0,0,4.22206515571503,0,0.170093705276516,6.9093093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|short_description=p9@ITGB1 | |||
}} |
Latest revision as of 00:19, 18 September 2015
Short description: | p9@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ITGB1_5end |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | 64bp_to_BC113901_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.03e-18 | 76 |
preadipocyte | 6.93e-08 | 12 |
somatic stem cell | 9.73e-08 | 433 |
multi fate stem cell | 2.32e-07 | 427 |
muscle precursor cell | 4.70e-07 | 58 |
myoblast | 4.70e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.70e-07 | 58 |
stem cell | 5.37e-07 | 441 |
skin fibroblast | 6.92e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.29e-09 | 99 |
dense mesenchyme tissue | 3.77e-07 | 73 |
somite | 5.09e-07 | 71 |
presomitic mesoderm | 5.09e-07 | 71 |
presumptive segmental plate | 5.09e-07 | 71 |
dermomyotome | 5.09e-07 | 71 |
trunk paraxial mesoderm | 5.09e-07 | 71 |
multilaminar epithelium | 5.85e-07 | 83 |
skin of body | 6.34e-07 | 41 |
skeletal muscle tissue | 7.21e-07 | 62 |
striated muscle tissue | 7.21e-07 | 62 |
myotome | 7.21e-07 | 62 |
paraxial mesoderm | 9.50e-07 | 72 |
presumptive paraxial mesoderm | 9.50e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.98e-10 | 14 |