FFCP PHASE1:Hg19::chr8:104033296..104033360,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:104033296..104033360,+
|short_description=p1@ATP6V1C1
|description=CAGE_peak_1_at_ATP6V1C1_5end
|association_with_transcript=0bp_to_ENST00000518738,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=528 | |EntrezGene=528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=856 | |HGNC=856 | ||
|TSSclassifier=strong | |||
|UniProt=E7EV59 | |UniProt=E7EV59 | ||
|association_with_transcript=0bp_to_ENST00000518738,ENST00000521514_5end | |||
|cluster_id=chr8:104033296..104033360,+ | |||
|description=CAGE_peak_1_at_ATP6V1C1_5end | |||
|id=chr8:104033296..104033360,+ | |||
|ontology_enrichment_celltype=CL:0000839!2.78e-19!70;CL:0002194!2.90e-17!63;CL:0000576!2.90e-17!63;CL:0000040!2.90e-17!63;CL:0000559!2.90e-17!63;CL:0000557!4.41e-17!71;CL:0002009!8.30e-17!65;CL:0000766!3.65e-16!76;CL:0000763!1.29e-12!112;CL:0000049!1.29e-12!112;CL:0002057!4.42e-12!42;CL:0000860!5.22e-12!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.50e-15;39!CL:0000234;1.50e-15;39!CL:0000860;5.45e-15;33!CL:0002057;5.45e-15;33!CL:0000576;8.77e-10;48!CL:0000766;1.44e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,8.49e-20,66;CL:0002194,8.84e-18,59;CL:0000576,8.84e-18,59;CL:0000040,8.84e-18,59;CL:0000559,8.84e-18,59;CL:0000557,1.70e-17,67;CL:0002009,2.82e-17,61;CL:0000766,1.69e-16,72;CL:0000473,2.07e-15,48;CL:0000234,2.07e-15,48;CL:0000763,1.11e-12,108;CL:0000049,1.11e-12,108;CL:0000860,4.42e-12,42;CL:0002057,4.42e-12,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.85e-15!57;UBERON:0005068!8.85e-15!57;UBERON:0006241!8.85e-15!57;UBERON:0007135!8.85e-15!57;UBERON:0001017!1.59e-14!82;UBERON:0005743!2.44e-14!86;UBERON:0001474!2.62e-14!86;UBERON:0002371!3.38e-14!80;UBERON:0002780!8.92e-14!41;UBERON:0001890!8.92e-14!41;UBERON:0006240!8.92e-14!41;UBERON:0003080!9.02e-14!42;UBERON:0004765!1.30e-13!101;UBERON:0001434!1.30e-13!101;UBERON:0000955!6.76e-13!69;UBERON:0006238!6.76e-13!69;UBERON:0002616!8.04e-13!59;UBERON:0000073!8.55e-13!94;UBERON:0001016!8.55e-13!94;UBERON:0002390!1.80e-11!102;UBERON:0003061!1.80e-11!102;UBERON:0002020!3.60e-11!34;UBERON:0003528!3.60e-11!34;UBERON:0000062!3.73e-11!511;UBERON:0001869!4.48e-11!32;UBERON:0001893!5.42e-11!34;UBERON:0002193!1.16e-10!112;UBERON:0002791!1.97e-10!33;UBERON:0007023!2.96e-10!115;UBERON:0002619!5.83e-10!22;UBERON:0002405!1.27e-09!115;UBERON:0001950!4.65e-09!20;UBERON:0000956!2.93e-08!25;UBERON:0000203!2.93e-08!25;UBERON:0003075!1.44e-07!86;UBERON:0007284!1.44e-07!86;UBERON:0002346!2.07e-07!90;UBERON:0000033!4.72e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.69e-10;32!UBERON:0002619;5.80e-10;22!UBERON:0002780;6.23e-10;41!UBERON:0001890;6.23e-10;41!UBERON:0003528;9.77e-10;34!UBERON:0002020;9.77e-10;34!UBERON:0001893;1.11e-09;34!UBERON:0002791;1.65e-09;32!UBERON:0001950;4.58e-09;20!UBERON:0000073;1.19e-08;53!UBERON:0002616;1.19e-08;53!UBERON:0000956;2.92e-08;25!UBERON:0000203;2.92e-08;25!UBERON:0001017;8.27e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.43e-15,56;UBERON:0005068,9.43e-15,56;UBERON:0006241,9.43e-15,56;UBERON:0007135,9.43e-15,56;UBERON:0001474,1.63e-14,82;UBERON:0001017,1.84e-14,81;UBERON:0002371,1.96e-14,76;UBERON:0000073,4.43e-14,53;UBERON:0002616,4.43e-14,53;UBERON:0004765,5.88e-14,90;UBERON:0002780,8.92e-14,41;UBERON:0001890,8.92e-14,41;UBERON:0003080,8.92e-14,41;UBERON:0006240,8.92e-14,41;UBERON:0001434,3.99e-13,100;UBERON:0000955,7.69e-13,68;UBERON:0006238,7.69e-13,68;UBERON:0001016,7.88e-13,89;UBERON:0002405,1.10e-12,93;UBERON:0002390,1.53e-11,98;UBERON:0003061,1.53e-11,98;UBERON:0003528,3.60e-11,34;UBERON:0002020,3.60e-11,34;UBERON:0001869,4.48e-11,32;UBERON:0001893,5.42e-11,34;UBERON:0002193,1.08e-10,108;UBERON:0002791,1.66e-10,32;UBERON:0002619,5.83e-10,22;UBERON:0007023,6.58e-10,114;UBERON:0001950,4.65e-09,20;UBERON:0000956,2.93e-08,25;UBERON:0000203,2.93e-08,25;UBERON:0011216,1.01e-07,223 | |||
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|short_description=p1@ATP6V1C1 | |||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p1@ATP6V1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP6V1C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518738, ENST00000521514_5end |
EntrezGene: | ATP6V1C1 |
HGNC: | 856 |
UniProt: | E7EV59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 8.49e-20 | 66 |
monopoietic cell | 8.84e-18 | 59 |
monocyte | 8.84e-18 | 59 |
monoblast | 8.84e-18 | 59 |
promonocyte | 8.84e-18 | 59 |
granulocyte monocyte progenitor cell | 1.70e-17 | 67 |
macrophage dendritic cell progenitor | 2.82e-17 | 61 |
myeloid leukocyte | 1.69e-16 | 72 |
defensive cell | 2.07e-15 | 48 |
phagocyte | 2.07e-15 | 48 |
myeloid cell | 1.11e-12 | 108 |
common myeloid progenitor | 1.11e-12 | 108 |
classical monocyte | 4.42e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.42e-12 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 9.43e-15 | 56 |
neural rod | 9.43e-15 | 56 |
future spinal cord | 9.43e-15 | 56 |
neural keel | 9.43e-15 | 56 |
bone element | 1.63e-14 | 82 |
central nervous system | 1.84e-14 | 81 |
bone marrow | 1.96e-14 | 76 |
regional part of nervous system | 4.43e-14 | 53 |
regional part of brain | 4.43e-14 | 53 |
skeletal element | 5.88e-14 | 90 |
regional part of forebrain | 8.92e-14 | 41 |
forebrain | 8.92e-14 | 41 |
anterior neural tube | 8.92e-14 | 41 |
future forebrain | 8.92e-14 | 41 |
skeletal system | 3.99e-13 | 100 |
brain | 7.69e-13 | 68 |
future brain | 7.69e-13 | 68 |
nervous system | 7.88e-13 | 89 |
immune system | 1.10e-12 | 93 |
hematopoietic system | 1.53e-11 | 98 |
blood island | 1.53e-11 | 98 |
brain grey matter | 3.60e-11 | 34 |
gray matter | 3.60e-11 | 34 |
cerebral hemisphere | 4.48e-11 | 32 |
telencephalon | 5.42e-11 | 34 |
hemolymphoid system | 1.08e-10 | 108 |
regional part of telencephalon | 1.66e-10 | 32 |
regional part of cerebral cortex | 5.83e-10 | 22 |
adult organism | 6.58e-10 | 114 |
neocortex | 4.65e-09 | 20 |
cerebral cortex | 2.93e-08 | 25 |
pallium | 2.93e-08 | 25 |
organ system subdivision | 1.01e-07 | 223 |