FFCP PHASE1:Hg19::chr8:103424436..103424458,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:103424436..103424458,-
|short_description=p6@UBR5
|description=CAGE_peak_6_at_UBR5_5end
|association_with_transcript=3bp_to_U95000_5end
|EntrezGene=51366
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51366 | |EntrezGene=51366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16806 | |HGNC=16806 | ||
|TSSclassifier=strong | |||
|UniProt=O95071 | |UniProt=O95071 | ||
|association_with_transcript=3bp_to_U95000_5end | |||
|cluster_id=chr8:103424436..103424458,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_UBR5_5end | |||
|id=chr8:103424436..103424458,- | |||
|ontology_enrichment_celltype=CL:0000738!2.09e-20!140;CL:0000037!7.97e-18!172;CL:0000566!7.97e-18!172;CL:0000988!8.75e-18!182;CL:0002032!1.58e-15!165;CL:0000837!1.58e-15!165;CL:0002031!5.86e-12!124;CL:0002087!2.16e-11!119;CL:0000763!5.22e-09!112;CL:0000049!5.22e-09!112;CL:0000766!5.32e-09!76;CL:0000542!4.22e-07!53;CL:0000051!4.22e-07!53;CL:0000557!4.76e-07!71;CL:0000838!4.85e-07!52;CL:0002057!5.01e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000081;8.69e-15;11!CL:0000094;4.10e-13;8!CL:0000453;3.39e-11;5!CL:0000451;6.99e-11;10!CL:0000624;1.90e-08;6!CL:0000990;2.99e-08;8!CL:0000775;1.19e-07;3!CL:0000791;1.39e-07;18!CL:0000789;1.39e-07;18!CL:0002419;1.39e-07;18!CL:0000097;2.12e-07;5!CL:0000623;2.14e-07;3!CL:0000226;4.45e-07;3!CL:0000842;4.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.95e-26,136;CL:0000988,1.86e-23,177;CL:0000037,3.93e-22,168;CL:0002032,2.91e-18,161;CL:0000837,2.91e-18,161;CL:0000081,9.25e-15,11;CL:0000094,4.68e-13,8;CL:0002031,4.03e-12,120;CL:0000453,3.29e-11,5;CL:0000451,3.71e-11,10;CL:0000763,7.25e-11,108;CL:0000049,7.25e-11,108;CL:0002087,4.72e-10,115;CL:0000766,2.79e-09,72;CL:0000624,1.35e-08,6;CL:0000990,2.74e-08,8;CL:0000838,5.79e-08,52;CL:0000542,9.98e-08,53;CL:0000051,9.98e-08,53;CL:0000791,1.20e-07,18;CL:0000789,1.20e-07,18;CL:0002420,1.20e-07,18;CL:0002419,1.20e-07,18;CL:0000790,1.20e-07,18;CL:0000775,1.21e-07,3;CL:0000097,2.02e-07,5;CL:0002028,2.02e-07,5;CL:0000623,2.08e-07,3;CL:0000825,2.08e-07,3;CL:0000226,5.39e-07,3;CL:0000842,5.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.92e-07!102;UBERON:0003061!4.92e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@UBR5 | |||
}} | }} |
Latest revision as of 22:24, 24 September 2015
Short description: | p6@UBR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UBR5_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 3bp_to_U95000_5end |
EntrezGene: | UBR5 |
HGNC: | 16806 |
UniProt: | O95071 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.95e-26 | 136 |
hematopoietic cell | 1.86e-23 | 177 |
hematopoietic stem cell | 3.93e-22 | 168 |
hematopoietic oligopotent progenitor cell | 2.91e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-18 | 161 |
blood cell | 9.25e-15 | 11 |
granulocyte | 4.68e-13 | 8 |
hematopoietic lineage restricted progenitor cell | 4.03e-12 | 120 |
Langerhans cell | 3.29e-11 | 5 |
dendritic cell | 3.71e-11 | 10 |
myeloid cell | 7.25e-11 | 108 |
common myeloid progenitor | 7.25e-11 | 108 |
nongranular leukocyte | 4.72e-10 | 115 |
myeloid leukocyte | 2.79e-09 | 72 |
CD4-positive, alpha-beta T cell | 1.35e-08 | 6 |
conventional dendritic cell | 2.74e-08 | 8 |
lymphoid lineage restricted progenitor cell | 5.79e-08 | 52 |
lymphocyte | 9.98e-08 | 53 |
common lymphoid progenitor | 9.98e-08 | 53 |
mature alpha-beta T cell | 1.20e-07 | 18 |
alpha-beta T cell | 1.20e-07 | 18 |
immature T cell | 1.20e-07 | 18 |
mature T cell | 1.20e-07 | 18 |
immature alpha-beta T cell | 1.20e-07 | 18 |
neutrophil | 1.21e-07 | 3 |
mast cell | 2.02e-07 | 5 |
basophil mast progenitor cell | 2.02e-07 | 5 |
natural killer cell | 2.08e-07 | 3 |
pro-NK cell | 2.08e-07 | 3 |
single nucleate cell | 5.39e-07 | 3 |
mononuclear cell | 5.39e-07 | 3 |