FFCP PHASE1:Hg19::chr10:14996070..14996102,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64421 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17642 | |||
|TSSclassifier=strong | |||
|UniProt=Q96SD1,B3KMX5 | |||
|association_with_transcript=0bp_to_ENST00000378246,ENST00000378258,ENST00000453695,NM_001033855,NM_001033857,NM_001033858,NM_022487,uc001inl.2,uc001inm.2,uc001inn.2,uc001ino.2,uc001inp.2,uc001inq.2,uc001inr.2,uc009xjh.2,uc009xji.2,uc010qbx.1_5end | |||
|cluster_id=chr10:14996070..14996102,- | |||
|description=CAGE_peak_2_at_DCLRE1C_5end | |||
|id=chr10:14996070..14996102,- | |||
|ontology_enrichment_celltype=CL:0000037!5.27e-32!172;CL:0000566!5.27e-32!172;CL:0002032!1.13e-29!165;CL:0000837!1.13e-29!165;CL:0000988!7.08e-29!182;CL:0000738!4.23e-26!140;CL:0002031!5.41e-24!124;CL:0002087!5.47e-24!119;CL:0000542!2.50e-16!53;CL:0000051!2.50e-16!53;CL:0000838!7.02e-16!52;CL:0000763!6.92e-14!112;CL:0000049!6.92e-14!112;CL:0000945!1.13e-11!24;CL:0000826!1.13e-11!24;CL:0000766!1.49e-10!76;CL:0000839!2.82e-10!70;CL:0000557!9.10e-09!71;CL:0000236!1.33e-08!14;CL:0002194!2.67e-08!63;CL:0000576!2.67e-08!63;CL:0000040!2.67e-08!63;CL:0000559!2.67e-08!63;CL:0002009!1.63e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.39e-12;24!CL:0000542;4.20e-10;53!CL:0000236;1.29e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.11e-32,168;CL:0002032,1.10e-29,161;CL:0000837,1.10e-29,161;CL:0000988,1.57e-29,177;CL:0000738,3.72e-26,136;CL:0002087,3.84e-24,115;CL:0002031,4.41e-24,120;CL:0000542,2.45e-16,53;CL:0000051,2.45e-16,53;CL:0000838,6.90e-16,52;CL:0000763,7.40e-14,108;CL:0000049,7.40e-14,108;CL:0000945,1.12e-11,24;CL:0000826,1.12e-11,24;CL:0000766,1.33e-10,72;CL:0000839,2.42e-10,66;CL:0000557,9.36e-09,67;CL:0000236,1.32e-08,14;CL:0002194,2.46e-08,59;CL:0000576,2.46e-08,59;CL:0000040,2.46e-08,59;CL:0000559,2.46e-08,59;CL:0002009,1.73e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000051;4.20e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!1.30e-10!51;DOID:0060083!1.30e-10!51;DOID:1240!1.65e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.29e-10,51;DOID:0060083,1.29e-10,51;DOID:1240,1.64e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-13!102;UBERON:0003061!1.54e-13!102;UBERON:0002193!1.49e-11!112;UBERON:0000178!9.33e-08!15;UBERON:0000179!9.33e-08!15;UBERON:0000463!9.33e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.58e-08;15!UBERON:0000179;9.58e-08;15!UBERON:0000463;9.58e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.44e-13,98;UBERON:0003061,1.44e-13,98;UBERON:0002193,1.67e-11,108;UBERON:0000178,9.26e-08,15;UBERON:0000179,9.26e-08,15;UBERON:0000463,9.26e-08,15;UBERON:0002405,5.07e-07,93 | |||
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| |||
|short_description=p2@DCLRE1C | |||
}} |
Latest revision as of 08:10, 17 September 2015
Short description: | p2@DCLRE1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DCLRE1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378246, ENST00000378258, ENST00000453695, NM_001033855, NM_001033857, NM_001033858, NM_022487, uc001inl.2, uc001inm.2, uc001inn.2, uc001ino.2, uc001inp.2, uc001inq.2, uc001inr.2, uc009xjh.2, uc009xji.2, uc010qbx.1_5end |
EntrezGene: | DCLRE1C |
HGNC: | 17642 |
UniProt: | Q96SD1B3KMX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.11e-32 | 168 |
hematopoietic oligopotent progenitor cell | 1.10e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-29 | 161 |
hematopoietic cell | 1.57e-29 | 177 |
leukocyte | 3.72e-26 | 136 |
nongranular leukocyte | 3.84e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 4.41e-24 | 120 |
lymphocyte | 2.45e-16 | 53 |
common lymphoid progenitor | 2.45e-16 | 53 |
lymphoid lineage restricted progenitor cell | 6.90e-16 | 52 |
myeloid cell | 7.40e-14 | 108 |
common myeloid progenitor | 7.40e-14 | 108 |
lymphocyte of B lineage | 1.12e-11 | 24 |
pro-B cell | 1.12e-11 | 24 |
myeloid leukocyte | 1.33e-10 | 72 |
myeloid lineage restricted progenitor cell | 2.42e-10 | 66 |
granulocyte monocyte progenitor cell | 9.36e-09 | 67 |
B cell | 1.32e-08 | 14 |
monopoietic cell | 2.46e-08 | 59 |
monocyte | 2.46e-08 | 59 |
monoblast | 2.46e-08 | 59 |
promonocyte | 2.46e-08 | 59 |
macrophage dendritic cell progenitor | 1.73e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.44e-13 | 98 |
blood island | 1.44e-13 | 98 |
hemolymphoid system | 1.67e-11 | 108 |
blood | 9.26e-08 | 15 |
haemolymphatic fluid | 9.26e-08 | 15 |
organism substance | 9.26e-08 | 15 |
immune system | 5.07e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.29e-10 | 51 |
immune system cancer | 1.29e-10 | 51 |
leukemia | 1.64e-07 | 39 |