FFCP PHASE1:Hg19::chr10:14066559..14066580,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:14066559..14066580,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr10:14066559..14066580,+ | |||
|id=chr10:14066559..14066580,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.06e-20!71;CL:0002057!5.86e-18!42;CL:0000839!3.61e-17!70;CL:0000766!4.90e-17!76;CL:0002009!1.07e-16!65;CL:0000860!1.72e-16!45;CL:0000738!8.45e-14!140;CL:0002194!1.01e-13!63;CL:0000576!1.01e-13!63;CL:0000040!1.01e-13!63;CL:0000559!1.01e-13!63;CL:0000763!2.12e-13!112;CL:0000049!2.12e-13!112;CL:0002031!1.49e-11!124;CL:0000037!6.26e-10!172;CL:0000566!6.26e-10!172;CL:0000988!5.20e-09!182;CL:0002032!8.28e-09!165;CL:0000837!8.28e-09!165;CL:0001014!4.02e-08!2;CL:0001016!4.02e-08!2;CL:0002087!8.22e-08!119;CL:0002274!1.78e-07!5;CL:0000457!1.78e-07!5;CL:0002191!1.78e-07!5;CL:0000097!1.78e-07!5;CL:0000831!1.78e-07!5;CL:0002028!1.78e-07!5;CL:0000453!9.24e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.60e-33;5!CL:0002393;1.47e-27;6!CL:0002397;1.47e-27;6!CL:0000163;5.67e-19;9!CL:0000766;2.71e-14;69!CL:0000235;5.10e-13;6!CL:0001014;2.72e-10;2!CL:0001016;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.60e-33,5;CL:0002028,1.60e-33,5;CL:0000557,6.77e-26,67;CL:0000839,2.67e-21,66;CL:0000766,1.64e-19,72;CL:0000163,5.67e-19,9;CL:0002393,1.10e-18,9;CL:0002397,1.10e-18,9;CL:0000763,5.97e-16,108;CL:0000049,5.97e-16,108;CL:0002031,2.62e-14,120;CL:0002009,6.82e-14,61;CL:0000473,2.25e-13,48;CL:0000234,2.25e-13,48;CL:0000235,4.81e-13,6;CL:0000738,1.46e-12,136;CL:0002194,1.13e-10,59;CL:0000576,1.13e-10,59;CL:0000040,1.13e-10,59;CL:0000559,1.13e-10,59;CL:0002032,1.62e-10,161;CL:0000837,1.62e-10,161;CL:0001014,2.99e-10,2;CL:0001016,2.99e-10,2;CL:0000037,4.75e-10,168;CL:0000988,1.67e-09,177;CL:0000860,3.59e-07,42;CL:0002057,3.59e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.25e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.00e-17!80;UBERON:0002390!1.06e-16!102;UBERON:0003061!1.06e-16!102;UBERON:0001474!4.36e-16!86;UBERON:0002193!1.24e-14!112;UBERON:0004765!3.70e-14!101;UBERON:0001434!3.70e-14!101;UBERON:0002405!3.87e-14!115;UBERON:0007023!8.71e-13!115;UBERON:0001049!3.21e-12!57;UBERON:0005068!3.21e-12!57;UBERON:0006241!3.21e-12!57;UBERON:0007135!3.21e-12!57;UBERON:0000988!2.00e-10!3;UBERON:0002298!2.82e-10!8;UBERON:0003075!3.47e-10!86;UBERON:0007284!3.47e-10!86;UBERON:0002616!3.80e-10!59;UBERON:0005743!3.91e-10!86;UBERON:0001017!1.32e-09!82;UBERON:0002346!1.54e-09!90;UBERON:0000955!2.58e-09!69;UBERON:0006238!2.58e-09!69;UBERON:0000073!9.05e-09!94;UBERON:0001016!9.05e-09!94;UBERON:0003076!1.67e-07!15;UBERON:0003057!1.67e-07!15;UBERON:0001893!2.32e-07!34;UBERON:0002148!2.70e-07!2;UBERON:0009662!2.70e-07!2;UBERON:0002020!2.84e-07!34;UBERON:0003528!2.84e-07!34;UBERON:0002780!3.91e-07!41;UBERON:0001890!3.91e-07!41;UBERON:0006240!3.91e-07!41;UBERON:0003080!6.39e-07!42;UBERON:0004733!9.59e-07!12;UBERON:0002028!9.59e-07!12;UBERON:0007277!9.59e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;3.25e-19;1!UBERON:0002360;2.72e-10;2!UBERON:0000094;2.72e-10;2!UBERON:0010743;2.72e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.22e-23,76;UBERON:0001474,4.00e-21,82;UBERON:0004765,3.21e-19,90;UBERON:0002363,4.69e-19,1;UBERON:0007645,4.69e-19,1;UBERON:0007647,4.69e-19,1;UBERON:0010115,4.69e-19,1;UBERON:0002405,1.37e-18,93;UBERON:0002390,1.27e-17,98;UBERON:0003061,1.27e-17,98;UBERON:0001434,2.92e-17,100;UBERON:0002193,5.97e-16,108;UBERON:0002360,3.27e-10,2;UBERON:0000094,3.27e-10,2;UBERON:0010743,3.27e-10,2;UBERON:0002204,4.09e-10,167;UBERON:0003081,3.40e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,3.32397245119126,2.80762226458198,2.82114131930607,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0,0,0.612167784741805,0.641858054152187,0,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0.217188844705117,0,0.736555271975129,1.58231193720442,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74442143041629,3.60299883542404,11.2355765749478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,2.51128545716063,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,2.32140586367385,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:14066559..14066580,+ | |||
}} |
Latest revision as of 11:59, 23 July 2015
Short description: | p@chr10:14066559..14066580, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:14066559..14066580, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.60e-33 | 5 |
basophil mast progenitor cell | 1.60e-33 | 5 |
granulocyte monocyte progenitor cell | 6.77e-26 | 67 |
myeloid lineage restricted progenitor cell | 2.67e-21 | 66 |
myeloid leukocyte | 1.64e-19 | 72 |
endocrine cell | 5.67e-19 | 9 |
intermediate monocyte | 1.10e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.10e-18 | 9 |
myeloid cell | 5.97e-16 | 108 |
common myeloid progenitor | 5.97e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 2.62e-14 | 120 |
macrophage dendritic cell progenitor | 6.82e-14 | 61 |
defensive cell | 2.25e-13 | 48 |
phagocyte | 2.25e-13 | 48 |
macrophage | 4.81e-13 | 6 |
leukocyte | 1.46e-12 | 136 |
monopoietic cell | 1.13e-10 | 59 |
monocyte | 1.13e-10 | 59 |
monoblast | 1.13e-10 | 59 |
promonocyte | 1.13e-10 | 59 |
hematopoietic oligopotent progenitor cell | 1.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-10 | 161 |
CD1a-positive Langerhans cell | 2.99e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.99e-10 | 2 |
hematopoietic stem cell | 4.75e-10 | 168 |
hematopoietic cell | 1.67e-09 | 177 |
classical monocyte | 3.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.59e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.22e-23 | 76 |
bone element | 4.00e-21 | 82 |
skeletal element | 3.21e-19 | 90 |
dura mater | 4.69e-19 | 1 |
future meninx | 4.69e-19 | 1 |
ectomeninx | 4.69e-19 | 1 |
future dura mater | 4.69e-19 | 1 |
immune system | 1.37e-18 | 93 |
hematopoietic system | 1.27e-17 | 98 |
blood island | 1.27e-17 | 98 |
skeletal system | 2.92e-17 | 100 |
hemolymphoid system | 5.97e-16 | 108 |
meninx | 3.27e-10 | 2 |
membrane organ | 3.27e-10 | 2 |
meningeal cluster | 3.27e-10 | 2 |
musculoskeletal system | 4.09e-10 | 167 |
lateral plate mesoderm | 3.40e-08 | 203 |