FFCP PHASE1:Hg19::chr10:124134136..124134153,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14335 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000479786_5end | |||
|cluster_id=chr10:124134136..124134153,+ | |||
|description=CAGE_peak_3_at_PLEKHA1_5end | |||
|id=chr10:124134136..124134153,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.27e-07,18;CL:0000789,3.27e-07,18;CL:0002420,3.27e-07,18;CL:0002419,3.27e-07,18;CL:0000790,3.27e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.72e-19!115;UBERON:0005743!2.75e-11!86;UBERON:0001017!5.84e-11!82;UBERON:0004121!1.03e-10!169;UBERON:0000924!1.60e-10!173;UBERON:0006601!1.60e-10!173;UBERON:0000073!1.62e-10!94;UBERON:0001016!1.62e-10!94;UBERON:0000033!3.14e-10!123;UBERON:0000153!4.14e-10!129;UBERON:0007811!4.14e-10!129;UBERON:0001049!5.19e-10!57;UBERON:0005068!5.19e-10!57;UBERON:0006241!5.19e-10!57;UBERON:0007135!5.19e-10!57;UBERON:0003080!6.40e-10!42;UBERON:0002616!8.99e-10!59;UBERON:0000955!1.43e-09!69;UBERON:0006238!1.43e-09!69;UBERON:0003075!1.68e-09!86;UBERON:0007284!1.68e-09!86;UBERON:0002780!1.84e-09!41;UBERON:0001890!1.84e-09!41;UBERON:0006240!1.84e-09!41;UBERON:0002346!3.76e-09!90;UBERON:0003056!9.02e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.92e-07;114!UBERON:0002780;6.87e-07;41!UBERON:0001890;6.87e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-22,114;UBERON:0000073,1.58e-10,53;UBERON:0002616,1.58e-10,53;UBERON:0001049,4.92e-10,56;UBERON:0005068,4.92e-10,56;UBERON:0006241,4.92e-10,56;UBERON:0007135,4.92e-10,56;UBERON:0002780,5.85e-10,41;UBERON:0001890,5.85e-10,41;UBERON:0003080,5.85e-10,41;UBERON:0006240,5.85e-10,41;UBERON:0001017,1.20e-09,81;UBERON:0001016,4.17e-09,89;UBERON:0000955,1.83e-08,68;UBERON:0006238,1.83e-08,68;UBERON:0003075,4.72e-08,82;UBERON:0007284,4.72e-08,82;UBERON:0003056,1.43e-07,61;UBERON:0010371,3.59e-07,104;UBERON:0002346,4.05e-07,86;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171;UBERON:0001894,8.58e-07,7;UBERON:0006222,8.58e-07,7 | |||
|phase1_expression=0.726713517082227,0,0.704772020479856,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0.873765488520689,0.791300934685361,0.74259811776028,0.994192127183747,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0.286235987131057,0.547497700291537,0.627713197974014,0.152826811495903,0,0.157421562627358,0.393364276848904,0.383829398097213,0.464448369948228,0.919421224478927,0,0,0.92960640696362,0,0.880801318004542,0.553995408531877,0.601633342410425,0.217010870715852,0.447830948479849,0.647787332037959,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0.434377689410233,1.21079900526674,0,0,0.211255286311942,0,0.209658645508376,0.336985893439485,0,0.32145117339416,0,0.19891667719909,0.365328307529268,0,1.09227722252426,2.66852776159066,0,0.800791974072025,2.87376219977242,0.661044872784862,1.90810750907073,1.1384259382189,1.17447437874188,0.764546456250458,0,0.560508562981536,0.263384084775077,2.55722701147983,3.14408610199332,1.02800749499755,1.5046784585161,3.91106719960308,2.36723902867367,0,0.111410456885174,1.76763544484902,1.32920336750173,1.08321545506006,0,1.30059347559878,0.493313713811028,0.829050053357545,1.44901542867526,1.33457906845854,1.87278579662799,1.04535523804977,0.793165398882963,0.383220493601921,0.34362744548263,1.01207876807801,1.27426165729639,0,2.85135613334512,2.25862678616659,1.4078527226986,0,2.13099526839615,1.64225599384209,1.41124720257313,1.60464117470104,1.59306844271079,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,2.3858578411533,1.94653948121054,0.756278537312543,0.221729397462564,0.790513071238134,1.37528029272598,0,0.741568885568859,0.649094787309367,0.174129737299267,0.132957960518865,0.476981248610684,0.571994910780128,1.11437250398869,0.198762407366705,0.860234595106124,1.04142150482278,0,0.419499436209906,0.275118041940067,0,0,1.42306505074684,1.00416183829401,0,0,0.24406205754817,0,0,0.714397826272638,0.44905874525234,0.563057402416611,0,0,0,0,0,3.05265836499774,1.49091585508596,0.379891534993739,1.45650098894541,0.286836620748814,0.354668382198357,1.12135520028461,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0.605429710579726,1.15235184896,0.234321431833797,0.312160076830321,0.570471821544449,1.04614076386261,0.469737994575059,0.971237666208789,0.421352420106746,0.816616685019573,0,0.309977343527296,1.18800285728205,1.23633464639278,2.73048408581408,0,0.841680569770331,0.500474079487857,0.554128230968366,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,1.06778694409284,1.27159140695737,0.600182192168805,0.412210116953756,0.257640540045629,0,2.02531598689519,0.389748020644795,0.504867548488229,0.736399189138395,0.80823028409406,0.355009592516614,0.705264687593482,0.169560592310488,0.57978255948989,0.545492241181669,1.72082757233402,3.29329006549908,2.38553582978673,3.48581828608555,1.34759371519982,3.28017106138317,4.37972830890996,0,0.643240938192885,0,0,1.44375896333917,0.828147600278907,0.674338760312407,0.482022059766964,0.441175890929576,0.435758888184812,0.949082476444386,0.404493924480493,0.588664395376038,0,0,1.40241773803446,0,0,1.26755034821831,0,1.18157981336281,0,1.72183813960359,0.514703430895577,1.42675371031213,1.1240175325762,0.502644862058154,1.66659201285353,0,0,1.44331342025273,0.579652024875384,1.17408694235822,1.01056513432752,1.38895653772983,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,1.34385702559088,0.992425680696705,1.07470227243418,1.45316969256981,0,0,0.088048434013226,0.829312462163088,1.00883967391873,1.38866676769018,0.63497894292169,0.763976851116555,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0.336393253036082,0.87192013766656,0.36669142910475,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.714889968290738,1.08524321078289,0,0.325736184293735,0.710783897485092,0.791951872933429,0.904318131178758,2.61460037580088,0.699810938274399,0,0.502257091432126,0,0.718874566474748,2.29723871668228,0,0.723906533337896,0.410952645100767,0.179060963239896,0.112085143993527,0.788123040807709,0.862510299438069,0.898401253958239,0.76228387266739,1.30139853857622,0,0.335032530668698,1.27587750330633,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,0.831883446123229,0,0.630809660135739,0.937131319941706,0.902838299183157,0,1.03473071292505,0,0.184369168541703,0.434418072340414,0.195801157462741,1.02943027143257,1.03384013061444,1.07857100409308,1.17400313583789,0.303127571446259,1.66435439510497,0.604780586659361,0.496215615637554,1.07423381301644,1.96462066103151,0.896974044789907,0.511707249066704,0.64341568457443,0,0.154209693802656,0,0.492762936082855,0,0.232420756919918,0.846016147141356,1.60405176242628,2.30202472339741,0.574072240823034,0.364182336013434,0.131124414959424,1.80479845162965,1.4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| |||
|short_description=p3@PLEKHA1 | |||
}} |
Latest revision as of 20:16, 16 September 2015
Short description: | p3@PLEKHA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLEKHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000479786_5end |
EntrezGene: | PLEKHA1 |
HGNC: | 14335 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.27e-07 | 18 |
alpha-beta T cell | 3.27e-07 | 18 |
immature T cell | 3.27e-07 | 18 |
mature T cell | 3.27e-07 | 18 |
immature alpha-beta T cell | 3.27e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.41e-22 | 114 |
regional part of nervous system | 1.58e-10 | 53 |
regional part of brain | 1.58e-10 | 53 |
neural tube | 4.92e-10 | 56 |
neural rod | 4.92e-10 | 56 |
future spinal cord | 4.92e-10 | 56 |
neural keel | 4.92e-10 | 56 |
regional part of forebrain | 5.85e-10 | 41 |
forebrain | 5.85e-10 | 41 |
anterior neural tube | 5.85e-10 | 41 |
future forebrain | 5.85e-10 | 41 |
central nervous system | 1.20e-09 | 81 |
nervous system | 4.17e-09 | 89 |
brain | 1.83e-08 | 68 |
future brain | 1.83e-08 | 68 |
neural plate | 4.72e-08 | 82 |
presumptive neural plate | 4.72e-08 | 82 |
pre-chordal neural plate | 1.43e-07 | 61 |
ecto-epithelium | 3.59e-07 | 104 |
neurectoderm | 4.05e-07 | 86 |
ectoderm-derived structure | 5.65e-07 | 171 |
ectoderm | 5.65e-07 | 171 |
presumptive ectoderm | 5.65e-07 | 171 |
diencephalon | 8.58e-07 | 7 |
future diencephalon | 8.58e-07 | 7 |