FFCP PHASE1:Hg19::chr10:112678904..112678964,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28093 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIK7,E9PRI7,E9PIY9,E9PM41 | |||
|association_with_transcript=0bp_to_ENST00000398289,ENST00000422050,ENST00000423273,ENST00000431847,ENST00000436562,ENST00000447005,ENST00000454061_5end | |||
|cluster_id=chr10:112678904..112678964,- | |||
|description=CAGE_peak_1_at_BBIP1_5end | |||
|id=chr10:112678904..112678964,- | |||
|ontology_enrichment_celltype=CL:0002057!2.60e-09!42;CL:0000860!3.23e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-09;33!CL:0002057;1.25e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.60e-09,42;CL:0002057,2.60e-09,42 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.18e-15!57;UBERON:0005068!6.18e-15!57;UBERON:0006241!6.18e-15!57;UBERON:0007135!6.18e-15!57;UBERON:0000073!7.32e-15!94;UBERON:0001016!7.32e-15!94;UBERON:0005743!3.56e-14!86;UBERON:0001017!5.69e-14!82;UBERON:0002780!1.45e-13!41;UBERON:0001890!1.45e-13!41;UBERON:0006240!1.45e-13!41;UBERON:0003080!7.05e-13!42;UBERON:0002616!1.70e-12!59;UBERON:0003075!4.91e-11!86;UBERON:0007284!4.91e-11!86;UBERON:0000955!5.22e-11!69;UBERON:0006238!5.22e-11!69;UBERON:0002346!1.07e-10!90;UBERON:0002020!1.66e-10!34;UBERON:0003528!1.66e-10!34;UBERON:0001893!5.55e-10!34;UBERON:0002791!5.73e-10!33;UBERON:0003056!7.32e-10!61;UBERON:0001869!2.79e-09!32;UBERON:0000956!3.10e-07!25;UBERON:0000203!3.10e-07!25;UBERON:0007023!9.54e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.03e-10;41!UBERON:0001890;4.03e-10;41!UBERON:0002791;4.12e-09;32!UBERON:0003528;5.00e-09;34!UBERON:0002020;5.00e-09;34!UBERON:0000073;5.35e-09;53!UBERON:0002616;5.35e-09;53!UBERON:0001869;1.08e-08;32!UBERON:0001893;1.09e-08;34!UBERON:0000956;2.92e-07;25!UBERON:0000203;2.92e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.47e-15,56;UBERON:0005068,1.47e-15,56;UBERON:0006241,1.47e-15,56;UBERON:0007135,1.47e-15,56;UBERON:0001016,4.34e-15,89;UBERON:0001017,1.96e-14,81;UBERON:0000073,2.55e-14,53;UBERON:0002616,2.55e-14,53;UBERON:0002780,1.45e-13,41;UBERON:0001890,1.45e-13,41;UBERON:0003080,1.45e-13,41;UBERON:0006240,1.45e-13,41;UBERON:0003075,6.52e-13,82;UBERON:0007284,6.52e-13,82;UBERON:0002346,1.75e-12,86;UBERON:0000955,1.92e-11,68;UBERON:0006238,1.92e-11,68;UBERON:0003056,1.34e-10,61;UBERON:0003528,1.66e-10,34;UBERON:0002020,1.66e-10,34;UBERON:0010314,1.93e-10,132;UBERON:0001893,5.55e-10,34;UBERON:0002791,9.10e-10,32;UBERON:0001869,2.79e-09,32;UBERON:0000956,3.10e-07,25;UBERON:0000203,3.10e-07,25;UBERON:0010371,3.92e-07,104 | |||
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| |||
|short_description=p1@BBIP1 | |||
}} |
Latest revision as of 09:31, 16 September 2015
Short description: | p1@BBIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BBIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398289, ENST00000422050, ENST00000423273, ENST00000431847, ENST00000436562, ENST00000447005, ENST00000454061_5end |
EntrezGene: | BBIP1 |
HGNC: | 28093 |
UniProt: | E9PIK7E9PRI7E9PIY9E9PM41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.60e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.60e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.47e-15 | 56 |
neural rod | 1.47e-15 | 56 |
future spinal cord | 1.47e-15 | 56 |
neural keel | 1.47e-15 | 56 |
nervous system | 4.34e-15 | 89 |
central nervous system | 1.96e-14 | 81 |
regional part of nervous system | 2.55e-14 | 53 |
regional part of brain | 2.55e-14 | 53 |
regional part of forebrain | 1.45e-13 | 41 |
forebrain | 1.45e-13 | 41 |
anterior neural tube | 1.45e-13 | 41 |
future forebrain | 1.45e-13 | 41 |
neural plate | 6.52e-13 | 82 |
presumptive neural plate | 6.52e-13 | 82 |
neurectoderm | 1.75e-12 | 86 |
brain | 1.92e-11 | 68 |
future brain | 1.92e-11 | 68 |
pre-chordal neural plate | 1.34e-10 | 61 |
brain grey matter | 1.66e-10 | 34 |
gray matter | 1.66e-10 | 34 |
structure with developmental contribution from neural crest | 1.93e-10 | 132 |
telencephalon | 5.55e-10 | 34 |
regional part of telencephalon | 9.10e-10 | 32 |
cerebral hemisphere | 2.79e-09 | 32 |
cerebral cortex | 3.10e-07 | 25 |
pallium | 3.10e-07 | 25 |
ecto-epithelium | 3.92e-07 | 104 |