FFCP PHASE1:Hg19::chr10:106098189..106098232,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85450 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29370 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWB1 | |||
|association_with_transcript=-27bp_to_ENST00000337478,uc001kyg.2_5end | |||
|cluster_id=chr10:106098189..106098232,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ITPRIP_5end | |||
|id=chr10:106098189..106098232,- | |||
|ontology_enrichment_celltype=CL:0000048!4.77e-21!430;CL:0000723!4.13e-20!436;CL:0002057!7.17e-20!42;CL:0002371!4.93e-19!591;CL:0000034!1.76e-18!444;CL:0000860!6.07e-18!45;CL:0002320!2.13e-17!365;CL:0000766!4.00e-17!76;CL:0000134!1.45e-15!358;CL:0000144!9.46e-14!625;CL:0000557!2.14e-13!71;CL:0000839!1.69e-12!70;CL:0000738!3.95e-12!140;CL:0002009!5.51e-12!65;CL:0002194!1.09e-11!63;CL:0000576!1.09e-11!63;CL:0000040!1.09e-11!63;CL:0000559!1.09e-11!63;CL:0000219!1.21e-10!390;CL:0002031!3.68e-09!124;CL:0002087!8.57e-09!119;CL:0000763!9.23e-08!112;CL:0000049!9.23e-08!112;CL:0000003!1.81e-07!722;CL:0000037!3.39e-07!172;CL:0000566!3.39e-07!172;CL:0000094!6.09e-07!8;CL:0000988!9.04e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.65e-16;33!CL:0002057;4.65e-16;33!CL:0000473;3.98e-12;39!CL:0000234;3.98e-12;39!CL:0000576;1.47e-09;48!CL:0000766;3.56e-09;69!CL:0000094;6.04e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.19e-21,427;CL:0000723,1.06e-20,433;CL:0000860,7.17e-20,42;CL:0002057,7.17e-20,42;CL:0000034,4.85e-19,441;CL:0000766,4.92e-18,72;CL:0000473,5.78e-18,48;CL:0000234,5.78e-18,48;CL:0002320,1.07e-17,361;CL:0000134,7.55e-16,354;CL:0000557,3.72e-14,67;CL:0000839,3.23e-13,66;CL:0002009,9.97e-13,61;CL:0000738,1.82e-12,136;CL:0002194,1.95e-12,59;CL:0000576,1.95e-12,59;CL:0000040,1.95e-12,59;CL:0000559,1.95e-12,59;CL:0000219,7.39e-11,386;CL:0002031,1.88e-09,120;CL:0002087,4.38e-09,115;CL:0000763,4.97e-08,108;CL:0000049,4.97e-08,108;CL:0000037,2.34e-07,168;CL:0000094,6.09e-07,8;CL:0000988,7.20e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.25e-21!216;UBERON:0002193!3.21e-17!112;UBERON:0002390!4.66e-17!102;UBERON:0003061!4.66e-17!102;UBERON:0002384!1.87e-16!375;UBERON:0002204!3.71e-15!167;UBERON:0002371!5.40e-14!80;UBERON:0004765!7.10e-12!101;UBERON:0001434!7.10e-12!101;UBERON:0001474!9.40e-12!86;UBERON:0001009!2.52e-11!113;UBERON:0004535!2.05e-10!110;UBERON:0002405!2.80e-10!115;UBERON:0000926!1.71e-08!448;UBERON:0004120!1.71e-08!448;UBERON:0006603!1.71e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.02e-22,203;UBERON:0000926,2.22e-20,315;UBERON:0004120,2.22e-20,315;UBERON:0006603,2.22e-20,315;UBERON:0002193,7.90e-18,108;UBERON:0002390,1.00e-17,98;UBERON:0003061,1.00e-17,98;UBERON:0002384,9.77e-17,371;UBERON:0002204,3.27e-16,167;UBERON:0002371,1.07e-14,76;UBERON:0002405,2.73e-14,93;UBERON:0001434,9.86e-13,100;UBERON:0004765,1.07e-12,90;UBERON:0001474,2.67e-12,82;UBERON:0001009,4.25e-11,112;UBERON:0004535,3.40e-10,109 | |||
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| |||
|short_description=p1@ITPRIP | |||
}} |
Latest revision as of 05:46, 16 September 2015
Short description: | p1@ITPRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITPRIP_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -27bp_to_ENST00000337478, uc001kyg.2_5end |
EntrezGene: | ITPRIP |
HGNC: | 29370 |
UniProt: | Q8IWB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.19e-21 | 427 |
somatic stem cell | 1.06e-20 | 433 |
classical monocyte | 7.17e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.17e-20 | 42 |
stem cell | 4.85e-19 | 441 |
myeloid leukocyte | 4.92e-18 | 72 |
defensive cell | 5.78e-18 | 48 |
phagocyte | 5.78e-18 | 48 |
connective tissue cell | 1.07e-17 | 361 |
mesenchymal cell | 7.55e-16 | 354 |
granulocyte monocyte progenitor cell | 3.72e-14 | 67 |
myeloid lineage restricted progenitor cell | 3.23e-13 | 66 |
macrophage dendritic cell progenitor | 9.97e-13 | 61 |
leukocyte | 1.82e-12 | 136 |
monopoietic cell | 1.95e-12 | 59 |
monocyte | 1.95e-12 | 59 |
monoblast | 1.95e-12 | 59 |
promonocyte | 1.95e-12 | 59 |
motile cell | 7.39e-11 | 386 |
hematopoietic lineage restricted progenitor cell | 1.88e-09 | 120 |
nongranular leukocyte | 4.38e-09 | 115 |
myeloid cell | 4.97e-08 | 108 |
common myeloid progenitor | 4.97e-08 | 108 |
hematopoietic stem cell | 2.34e-07 | 168 |
granulocyte | 6.09e-07 | 8 |
hematopoietic cell | 7.20e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.02e-22 | 203 |
mesoderm | 2.22e-20 | 315 |
mesoderm-derived structure | 2.22e-20 | 315 |
presumptive mesoderm | 2.22e-20 | 315 |
hemolymphoid system | 7.90e-18 | 108 |
hematopoietic system | 1.00e-17 | 98 |
blood island | 1.00e-17 | 98 |
connective tissue | 9.77e-17 | 371 |
musculoskeletal system | 3.27e-16 | 167 |
bone marrow | 1.07e-14 | 76 |
immune system | 2.73e-14 | 93 |
skeletal system | 9.86e-13 | 100 |
skeletal element | 1.07e-12 | 90 |
bone element | 2.67e-12 | 82 |
circulatory system | 4.25e-11 | 112 |
cardiovascular system | 3.40e-10 | 109 |