FFCP PHASE1:Hg19::chr10:104952377..104952445,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:104952377..104952445,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_at_chr10:104952377..104952445,+ | |||
|id=chr10:104952377..104952445,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.48e-36!172;CL:0000566!6.48e-36!172;CL:0002032!9.13e-34!165;CL:0000837!9.13e-34!165;CL:0000988!6.20e-33!182;CL:0000738!5.63e-32!140;CL:0000766!5.00e-28!76;CL:0000763!5.06e-28!112;CL:0000049!5.06e-28!112;CL:0002057!8.14e-27!42;CL:0002087!1.45e-26!119;CL:0002031!2.09e-26!124;CL:0000860!1.63e-25!45;CL:0000557!2.28e-24!71;CL:0002009!8.39e-22!65;CL:0000839!3.11e-21!70;CL:0002194!4.70e-21!63;CL:0000576!4.70e-21!63;CL:0000040!4.70e-21!63;CL:0000559!4.70e-21!63;CL:0000134!6.00e-08!358;CL:0002320!1.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-22;33!CL:0002057;3.42e-22;33!CL:0000576;9.29e-20;48!CL:0000473;4.88e-17;39!CL:0000234;4.88e-17;39!CL:0000766;1.77e-16;69!CL:0000763;3.68e-12;100!CL:0002087;2.88e-10;104!CL:0000738;5.39e-09;136!CL:0000988;2.12e-07;177!CL:0000094;3.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.39e-42,168;CL:0002032,6.89e-40,161;CL:0000837,6.89e-40,161;CL:0000988,6.11e-38,177;CL:0000738,1.36e-37,136;CL:0000763,4.96e-34,108;CL:0000049,4.96e-34,108;CL:0000766,7.82e-34,72;CL:0002031,3.10e-31,120;CL:0002087,4.07e-31,115;CL:0000860,1.27e-29,42;CL:0002057,1.27e-29,42;CL:0000557,1.30e-29,67;CL:0002009,1.03e-26,61;CL:0000473,1.94e-26,48;CL:0000234,1.94e-26,48;CL:0000839,2.68e-26,66;CL:0002194,7.06e-26,59;CL:0000576,7.06e-26,59;CL:0000040,7.06e-26,59;CL:0000559,7.06e-26,59;CL:0000134,2.59e-09,354;CL:0002320,9.70e-09,361;CL:0002393,3.26e-07,9;CL:0002397,3.26e-07,9;CL:0000094,4.44e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.05e-22;42!CL:0000049;3.14e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.08e-28!112;UBERON:0002390!1.13e-26!102;UBERON:0003061!1.13e-26!102;UBERON:0002371!5.63e-21!80;UBERON:0002405!6.96e-20!115;UBERON:0001474!2.18e-19!86;UBERON:0004765!2.08e-14!101;UBERON:0001434!2.08e-14!101;UBERON:0003081!6.04e-13!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.52e-33,108;UBERON:0002390,4.86e-32,98;UBERON:0003061,4.86e-32,98;UBERON:0002405,4.79e-28,93;UBERON:0002371,1.36e-26,76;UBERON:0001474,2.17e-24,82;UBERON:0004765,2.26e-20,90;UBERON:0001434,5.34e-16,100;UBERON:0003081,4.17e-15,203;UBERON:0002384,1.44e-07,371 | |||
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| |||
|short_description=p@chr10:104952377..104952445,+ | |||
}} |
Latest revision as of 09:56, 23 July 2015
Short description: | p@chr10:104952377..104952445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104952377..104952445, + |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.39e-42 | 168 |
hematopoietic oligopotent progenitor cell | 6.89e-40 | 161 |
hematopoietic multipotent progenitor cell | 6.89e-40 | 161 |
hematopoietic cell | 6.11e-38 | 177 |
leukocyte | 1.36e-37 | 136 |
myeloid cell | 4.96e-34 | 108 |
common myeloid progenitor | 4.96e-34 | 108 |
myeloid leukocyte | 7.82e-34 | 72 |
hematopoietic lineage restricted progenitor cell | 3.10e-31 | 120 |
nongranular leukocyte | 4.07e-31 | 115 |
classical monocyte | 1.27e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-29 | 42 |
granulocyte monocyte progenitor cell | 1.30e-29 | 67 |
macrophage dendritic cell progenitor | 1.03e-26 | 61 |
defensive cell | 1.94e-26 | 48 |
phagocyte | 1.94e-26 | 48 |
myeloid lineage restricted progenitor cell | 2.68e-26 | 66 |
monopoietic cell | 7.06e-26 | 59 |
monocyte | 7.06e-26 | 59 |
monoblast | 7.06e-26 | 59 |
promonocyte | 7.06e-26 | 59 |
mesenchymal cell | 2.59e-09 | 354 |
connective tissue cell | 9.70e-09 | 361 |
intermediate monocyte | 3.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.26e-07 | 9 |
granulocyte | 4.44e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.52e-33 | 108 |
hematopoietic system | 4.86e-32 | 98 |
blood island | 4.86e-32 | 98 |
immune system | 4.79e-28 | 93 |
bone marrow | 1.36e-26 | 76 |
bone element | 2.17e-24 | 82 |
skeletal element | 2.26e-20 | 90 |
skeletal system | 5.34e-16 | 100 |
lateral plate mesoderm | 4.17e-15 | 203 |
connective tissue | 1.44e-07 | 371 |