FFCP PHASE1:Hg19::chr10:103880410..103880421,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6532 | |||
|TSSclassifier=strong | |||
|UniProt=Q86U70 | |||
|association_with_transcript=-200bp_to_ENST00000425280,NM_001113407,uc009xwz.2_5end | |||
|cluster_id=chr10:103880410..103880421,- | |||
|description=CAGE_peak_8_at_LDB1_5end | |||
|id=chr10:103880410..103880421,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-14!115;UBERON:0000073!1.19e-10!94;UBERON:0001016!1.19e-10!94;UBERON:0005743!7.61e-10!86;UBERON:0001049!1.53e-09!57;UBERON:0005068!1.53e-09!57;UBERON:0006241!1.53e-09!57;UBERON:0007135!1.53e-09!57;UBERON:0003075!2.74e-09!86;UBERON:0007284!2.74e-09!86;UBERON:0001017!3.01e-09!82;UBERON:0002346!8.55e-09!90;UBERON:0001950!1.72e-08!20;UBERON:0002780!2.07e-08!41;UBERON:0001890!2.07e-08!41;UBERON:0006240!2.07e-08!41;UBERON:0002616!2.45e-08!59;UBERON:0002619!5.92e-08!22;UBERON:0000955!6.15e-08!69;UBERON:0006238!6.15e-08!69;UBERON:0002020!6.54e-08!34;UBERON:0003528!6.54e-08!34;UBERON:0003080!7.57e-08!42;UBERON:0001893!1.12e-07!34;UBERON:0001869!1.80e-07!32;UBERON:0002791!1.87e-07!33;UBERON:0000956!2.25e-07!25;UBERON:0000203!2.25e-07!25;UBERON:0000153!4.02e-07!129;UBERON:0007811!4.02e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.35e-09;22!UBERON:0001950;4.52e-09;20!UBERON:0000956;1.56e-07;25!UBERON:0000203;1.56e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.93e-10,114;UBERON:0001950,2.30e-09,20;UBERON:0002619,2.58e-09,22;UBERON:0000956,1.00e-07,25;UBERON:0000203,1.00e-07,25;UBERON:0003075,7.22e-07,82;UBERON:0007284,7.22e-07,82;UBERON:0003528,8.45e-07,34;UBERON:0002020,8.45e-07,34;UBERON:0002791,9.95e-07,32 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,0,0.893922188854576,1.74467704820074,0,0,0.783556884599516,0,0,0,0.791300934685361,0.247532705920093,0.994192127183747,0,1.20538905604795,0,0.975865597581014,0.492484232307152,0.408001382488506,0.313454721478088,0.572471974262113,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0.369754010166788,0.0774672005803016,0,1.46800219667424,0.553995408531877,0,0.434021741431704,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,2.64342657158052,2.80254281490768,1.05353633910031,1.7703879310245,1.17903228824749,2.05601498999509,0.167186495390678,1.62961133316795,1.89379122293893,0,0.334231370655521,0.294605907474837,0.664601683750863,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,3.41059095272739,1.87278579662799,2.09071047609954,0.113309342697566,2.29932296161153,0.34362744548263,0.506039384039006,0.95569624297229,1.30216690771284,0.950452044448374,0.602300476311091,0.895906278080929,1.24930726552346,0.710331756132051,1.64225599384209,1.41124720257313,1.60464117470104,4.19990771260117,0,0,0.12786256184353,0,0.50133791063589,1.01392563272577,3.9764297352555,0,0.189069634328136,0.665188192387692,0.351339142772504,0.982343066232845,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0,0,0,1.00416183829401,0,0,0,0,0,0,0.44905874525234,0,0,0,0.549605231791222,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,1.06400514659507,0,0,0.49333509683432,1.24484414159907,0.67355336034844,0.326923806226917,1.05950199351452,0,0.70296429550139,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.421352420106746,0.408308342509787,0.122834317311768,0.206651562351531,1.18800285728205,2.71993622206413,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.919463387397059,2.40380894250555,0.226864366320042,1.07633781413317,0.640672166455702,0,0,0.412210116953756,1.28820270022815,0.558350568994769,0.168776332241266,0.389748020644795,1.00973509697646,1.47279837827679,1.93975268182574,2.84007674013291,0.806016785821122,0.67824236924195,0,0,0,0.487894824518382,0.662648841607426,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,2.3218396401599,0,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,2.4694440679884,1.47008711385542,0,0,1.18157981336281,4.41463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0.977424915930974,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.432359860250884,0.50496973370552,0,0,0,0,0.102827492703324,0.600686115687835,0.571652865261156,1.56983518083505,0.87192013766656,0.4400297149257,0.258543431515556,7.15312891703765,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,1.28680194292333,1.62786481617433,0,0,0.355391948742546,1.58390374586686,0.301439377059586,0,0.499864955910285,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.144781306667579,0,0.358121926479791,0,2.1673383622212,1.94064817373566,2.18183161675572,0,1.30139853857622,3.86644406388848,1.67516265334349,1.27587750330633,0,0,0,1.71768088406796,3.00102312635806,0.813795071099207,1.24782516918484,0.178428988797162,1.10391690523754,0.937131319941706,3.00946099727719,2.27407504055985,2.0694614258501,0,0.368738337083406,0.781952530212746,4.11182430671755,3.43143423810856,0.620304078368662,0.647142602455851,1.06727557803444,0,0,0.604780586659361,1.24053903909388,0.460385919864187,0,0.640695746278505,0.511707249066704,0.321707842287215,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,1.18011973463482,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,1.00337954770971,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,1.30151357865721,0.309123034943167,0.366277859273374,0.330037999682352,0,0,0,0.580024309752732,1.07834031980251,0.767518373630648,0.137836572484531,0.644521469209642,1.16013355131383,0.255679882248303,1.4245125703478,0,0,0,0,0,0.62962469366128,2.0911118104818,0.308033580176089,0,1.73986598415015,0.55597265731176,0,0,0.632758849437452,0.953150969619124,0.511795582622668,2.1396949401696,0.95460974377781,0.78494864019923,0.359744915166629,1.09814811894422,0.824686816419805,0.202182481573316,0,0.421258456238981,2.43816869544795,0,0,0,0.424216295861138,2.26016233240486,1.65409603063837,0,0,0,2.62357900818653,0,0.30982349809975,0.563391205064483,0.286822704408103,0.687743287091848,0,0.709522128141196,0.422215270595328,0.329294892959902,0.75894634753143,1.39973888097993,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0.79312517629427,0.320472213382419,0.9624798552633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| |||
|short_description=p8@LDB1 | |||
}} |
Latest revision as of 00:14, 16 September 2015
Short description: | p8@LDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LDB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -200bp_to_ENST00000425280, NM_001113407, uc009xwz.2_5end |
EntrezGene: | LDB1 |
HGNC: | 6532 |
UniProt: | Q86U70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.93e-10 | 114 |
neocortex | 2.30e-09 | 20 |
regional part of cerebral cortex | 2.58e-09 | 22 |
cerebral cortex | 1.00e-07 | 25 |
pallium | 1.00e-07 | 25 |
neural plate | 7.22e-07 | 82 |
presumptive neural plate | 7.22e-07 | 82 |
brain grey matter | 8.45e-07 | 34 |
gray matter | 8.45e-07 | 34 |
regional part of telencephalon | 9.95e-07 | 32 |