FFCP PHASE1:Hg19::chr7:93519597..93519625,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:93519597..93519625,-
|short_description=p3@TFPI2
|description=CAGE_peak_3_at_TFPI2_5end
|association_with_transcript=-115bp_to_ENST00000451238_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7980 | |EntrezGene=7980 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11761 | |HGNC=11761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-115bp_to_ENST00000451238_5end | |||
|cluster_id=chr7:93519597..93519625,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_3_at_TFPI2_5end | |||
|id=chr7:93519597..93519625,- | |||
|ontology_enrichment_celltype=CL:0000055!1.30e-26!180;CL:0000192!1.31e-26!42;CL:0000514!1.31e-26!42;CL:0000680!8.56e-26!57;CL:0000056!8.56e-26!57;CL:0000355!8.56e-26!57;CL:0000187!2.46e-24!54;CL:0000222!3.24e-24!119;CL:0000359!1.34e-23!32;CL:0000393!4.67e-23!60;CL:0000211!4.67e-23!60;CL:0000183!1.99e-22!59;CL:0000220!1.85e-14!246;CL:0002321!2.10e-14!248;CL:0000057!4.54e-10!75;CL:0000144!1.26e-09!625;CL:0000548!4.40e-09!679;CL:0000004!4.40e-09!679;CL:0000255!4.40e-09!679;CL:0000012!9.93e-09!682;CL:0002371!1.97e-08!591;CL:0002539!7.54e-08!10;CL:0002494!2.61e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.76e-31;32!CL:0000192;3.81e-23;43!CL:0000187;1.15e-12;55!CL:0000393;1.18e-10;61!CL:0000211;1.18e-10;61!CL:0002595;1.26e-09;5!CL:0002539;2.87e-09;10!CL:0002494;1.01e-08;16!CL:0000134;7.67e-08;55!CL:0002594;1.95e-07;4!CL:0000048;5.39e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.48e-32,32;CL:0000192,9.48e-32,43;CL:0000514,9.48e-32,43;CL:0000187,1.50e-25,55;CL:0000680,3.23e-25,58;CL:0000056,3.23e-25,58;CL:0000355,3.23e-25,58;CL:0000393,2.54e-23,61;CL:0000211,2.54e-23,61;CL:0000222,2.67e-13,121;CL:0000048,2.91e-11,427;CL:0000723,9.14e-11,433;CL:0000034,3.96e-10,441;CL:0002595,1.28e-09,5;CL:0002539,2.80e-09,10;CL:0002494,1.24e-08,16;CL:0002594,1.62e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;3.81e-23;43!CL:0000355;6.52e-12;58!UBERON:0005795;2.72e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!3.81e-12!14;DOID:120!5.42e-09!27;DOID:193!7.33e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.85e-21;14!DOID:120;1.10e-16;27!DOID:193;3.87e-15;29!DOID:0060072;9.90e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.29e-21,14;DOID:120,1.10e-16,27;DOID:193,3.87e-15,29;DOID:0060072,8.77e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002049!3.57e-25!79;UBERON:0007798!3.57e-25!79;UBERON:0004872!9.92e-25!84;UBERON:0001981!2.63e-24!60;UBERON:0007500!2.63e-24!60;UBERON:0004537!2.63e-24!60;UBERON:0006965!2.63e-24!60;UBERON:0000055!6.55e-24!69;UBERON:0001134!1.04e-22!61;UBERON:0002036!1.04e-22!61;UBERON:0003082!1.04e-22!61;UBERON:0000490!1.66e-22!138;UBERON:0004290!2.23e-22!70;UBERON:0000914!3.13e-22!83;UBERON:0002329!3.13e-22!83;UBERON:0003077!3.13e-22!83;UBERON:0003059!3.13e-22!83;UBERON:0007282!3.13e-22!83;UBERON:0009618!3.13e-22!83;UBERON:0007285!3.13e-22!83;UBERON:0002385!2.50e-21!63;UBERON:0001015!2.50e-21!63;UBERON:0000383!2.50e-21!63;UBERON:0000486!6.94e-21!82;UBERON:0001637!2.15e-20!42;UBERON:0003509!2.15e-20!42;UBERON:0004572!2.15e-20!42;UBERON:0004535!6.78e-20!110;UBERON:0005256!8.08e-20!143;UBERON:0001009!2.24e-19!113;UBERON:0003914!2.12e-18!118;UBERON:0004573!3.48e-17!33;UBERON:0004571!3.48e-17!33;UBERON:0002100!2.34e-15!216;UBERON:0003104!3.80e-12!238;UBERON:0009142!3.80e-12!238;UBERON:0000119!2.09e-10!312;UBERON:0000483!2.71e-10!309;UBERON:0000477!1.03e-08!286;UBERON:0000992!1.48e-08!13;UBERON:0000926!3.46e-08!448;UBERON:0004120!3.46e-08!448;UBERON:0006603!3.46e-08!448;UBERON:0000947!4.91e-08!21;UBERON:0010191!4.91e-08!21;UBERON:0003513!5.00e-08!8;UBERON:0004237!7.54e-08!10;UBERON:0004695!7.54e-08!10;UBERON:0002111!7.54e-08!10;UBERON:0004178!7.54e-08!10;UBERON:0000481!8.26e-08!347;UBERON:0001135!1.52e-07!15;UBERON:0000475!1.76e-07!365;UBERON:0004111!3.53e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.34e-20;33!UBERON:0004571;1.34e-20;33!UBERON:0001637;2.55e-19;42!UBERON:0003509;2.55e-19;42!UBERON:0004572;2.55e-19;42!UBERON:0007500;4.29e-13;56!UBERON:0001981;4.29e-13;56!UBERON:0004537;4.29e-13;56!UBERON:0003513;3.31e-12;7!UBERON:0000992;1.11e-11;13!UBERON:0000055;1.83e-10;65!UBERON:0003834;1.26e-09;5!UBERON:0001533;1.26e-09;5!UBERON:0004237;2.87e-09;10!UBERON:0004695;2.87e-09;10!UBERON:0002111;2.87e-09;10!UBERON:0004178;2.87e-09;10!UBERON:0003134;4.73e-09;33!UBERON:0001135;7.16e-09;15!UBERON:0002118;1.01e-08;5!UBERON:0002049;2.17e-08;75!UBERON:0007798;2.17e-08;75!UBERON:0000474;3.97e-08;37!UBERON:0002119;4.69e-08;4!UBERON:0000947;4.99e-08;21!UBERON:0010191;4.99e-08;21!UBERON:0000991;9.08e-08;21!UBERON:0003914;1.17e-07;74!UBERON:0001310;1.95e-07;4!UBERON:0003100;9.94e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.49e-28,42;UBERON:0003509,6.49e-28,42;UBERON:0004572,6.49e-28,42;UBERON:0004872,3.21e-26,83;UBERON:0007500,1.59e-24,59;UBERON:0001981,1.59e-24,59;UBERON:0004537,1.59e-24,59;UBERON:0006965,1.59e-24,59;UBERON:0004573,6.36e-23,33;UBERON:0004571,6.36e-23,33;UBERON:0001134,7.45e-23,62;UBERON:0002036,7.45e-23,62;UBERON:0003082,7.45e-23,62;UBERON:0002329,8.75e-23,71;UBERON:0003059,8.75e-23,71;UBERON:0007282,8.75e-23,71;UBERON:0004290,8.75e-23,71;UBERON:0009618,8.75e-23,71;UBERON:0000055,1.19e-22,68;UBERON:0003077,2.67e-22,72;UBERON:0007285,2.67e-22,72;UBERON:0007524,7.92e-22,73;UBERON:0002385,8.68e-22,64;UBERON:0001015,8.68e-22,64;UBERON:0000383,8.68e-22,64;UBERON:0007503,7.83e-21,78;UBERON:0002049,8.33e-21,78;UBERON:0007798,8.33e-21,78;UBERON:0000490,1.08e-18,148;UBERON:0004535,1.63e-18,109;UBERON:0000486,9.10e-18,83;UBERON:0001009,1.20e-17,112;UBERON:0003914,5.40e-17,117;UBERON:0005256,1.32e-16,122;UBERON:0000926,9.17e-16,315;UBERON:0004120,9.17e-16,315;UBERON:0006603,9.17e-16,315;UBERON:0003104,2.16e-14,160;UBERON:0009142,2.16e-14,160;UBERON:0003513,3.17e-12,7;UBERON:0000992,1.36e-11,13;UBERON:0003134,4.43e-10,37;UBERON:0000474,4.43e-10,37;UBERON:0003834,1.28e-09,5;UBERON:0001533,1.28e-09,5;UBERON:0004237,2.80e-09,10;UBERON:0004695,2.80e-09,10;UBERON:0002111,2.80e-09,10;UBERON:0004178,2.80e-09,10;UBERON:0002100,3.03e-09,199;UBERON:0001135,6.97e-09,15;UBERON:0002118,1.00e-08,5;UBERON:0003498,1.14e-08,5;UBERON:0005985,1.14e-08,5;UBERON:0003100,1.31e-08,41;UBERON:0005156,1.75e-08,59;UBERON:0000990,1.75e-08,59;UBERON:0002119,4.84e-08,4;UBERON:0000947,4.92e-08,21;UBERON:0010191,4.92e-08,21;UBERON:0000991,1.03e-07,21;UBERON:0009196,1.03e-07,21;UBERON:0009117,1.03e-07,21;UBERON:0005564,1.03e-07,21;UBERON:0003133,1.11e-07,48;UBERON:0001310,1.62e-07,4;UBERON:0000948,2.37e-07,24;UBERON:0005498,2.37e-07,24;UBERON:0004140,2.37e-07,24;UBERON:0009881,2.37e-07,24;UBERON:0004141,2.37e-07,24;UBERON:0003084,2.37e-07,24;UBERON:0007005,2.37e-07,24;UBERON:0004139,2.37e-07,24;UBERON:0004291,2.37e-07,24;UBERON:0004176,3.08e-07,22;UBERON:0003081,5.83e-07,203;UBERON:0004111,6.14e-07,240;UBERON:0000025,6.63e-07,192;UBERON:0000483,9.14e-07,306 | |||
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| ||
|short_description=p3@TFPI2 | |||
}} | }} |
Latest revision as of 01:39, 20 September 2015
Short description: | p3@TFPI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFPI2_5end |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | -115bp_to_ENST00000451238_5end |
EntrezGene: | TFPI2 |
HGNC: | 11761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.48e-32 | 32 |
smooth muscle cell | 9.48e-32 | 43 |
smooth muscle myoblast | 9.48e-32 | 43 |
muscle cell | 1.50e-25 | 55 |
muscle precursor cell | 3.23e-25 | 58 |
myoblast | 3.23e-25 | 58 |
multi-potent skeletal muscle stem cell | 3.23e-25 | 58 |
electrically responsive cell | 2.54e-23 | 61 |
electrically active cell | 2.54e-23 | 61 |
mesodermal cell | 2.67e-13 | 121 |
multi fate stem cell | 2.91e-11 | 427 |
somatic stem cell | 9.14e-11 | 433 |
stem cell | 3.96e-10 | 441 |
smooth muscle cell of the subclavian artery | 1.28e-09 | 5 |
aortic smooth muscle cell | 2.80e-09 | 10 |
cardiocyte | 1.24e-08 | 16 |
smooth muscle cell of the umbilical artery | 1.62e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.29e-21 | 14 |
female reproductive organ cancer | 1.10e-16 | 27 |