FFCP PHASE1:Hg19::chr7:93518473..93518503,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:93518473..93518503,+
|short_description=p@chr7:93518473..93518503,+
|description=CAGE_peak_at_chr7:93518473..93518503,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:93518473..93518503,+ | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93518473..93518503,+ | |||
|id=chr7:93518473..93518503,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.28e-29!32;CL:0000192!1.06e-25!42;CL:0000514!1.06e-25!42;CL:0000187!3.80e-25!54;CL:0000680!7.35e-25!57;CL:0000056!7.35e-25!57;CL:0000355!7.35e-25!57;CL:0000393!9.02e-23!60;CL:0000211!9.02e-23!60;CL:0000183!5.03e-22!59;CL:0000222!1.92e-15!119;CL:0000055!2.08e-12!180;CL:0002494!3.96e-10!16;CL:0002595!2.82e-09!5;CL:0000220!2.09e-07!246;CL:0002321!3.15e-07!248;CL:0002539!3.18e-07!10;CL:0002594!3.41e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.53e-49;32!CL:0000192;4.39e-30;43!CL:0002595;1.47e-21;5!CL:0002594;2.69e-16;4!CL:0000187;3.48e-16;55!CL:0000393;7.27e-16;61!CL:0000211;7.27e-16;61!CL:0002494;1.95e-15;16!CL:0002592;2.14e-13;3!CL:0002539;4.48e-10;10!CL:0002593;5.05e-10;2!CL:0002596;2.58e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.82e-52,32;CL:0000192,2.76e-41,43;CL:0000514,2.76e-41,43;CL:0000187,4.15e-34,55;CL:0000680,4.79e-32,58;CL:0000056,4.79e-32,58;CL:0000355,4.79e-32,58;CL:0000393,3.47e-30,61;CL:0000211,3.47e-30,61;CL:0002595,1.11e-21,5;CL:0002594,2.93e-16,4;CL:0002494,2.42e-15,16;CL:0000222,8.22e-14,121;CL:0002592,2.34e-13,3;CL:0002539,3.96e-10,10;CL:0002593,5.07e-10,2;CL:0002596,2.64e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000514;4.39e-30;43!CL:0000355;1.99e-17;58!UBERON:0005795;7.78e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!3.96e-13!14;DOID:120!5.70e-10!27;DOID:193!5.55e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.70e-13;3!DOID:127;1.70e-13;3!DOID:0060072;3.13e-10;4!DOID:2394;5.11e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.67e-13,3;DOID:127,1.67e-13,3;DOID:0060072,3.09e-10,4;DOID:2394,7.01e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!5.61e-27!42;UBERON:0003509!5.61e-27!42;UBERON:0004572!5.61e-27!42;UBERON:0004872!2.23e-26!84;UBERON:0004290!2.16e-23!70;UBERON:0000914!1.46e-22!83;UBERON:0002329!1.46e-22!83;UBERON:0003077!1.46e-22!83;UBERON:0003059!1.46e-22!83;UBERON:0007282!1.46e-22!83;UBERON:0009618!1.46e-22!83;UBERON:0007285!1.46e-22!83;UBERON:0001134!1.92e-22!61;UBERON:0002036!1.92e-22!61;UBERON:0003082!1.92e-22!61;UBERON:0001981!2.62e-22!60;UBERON:0007500!2.62e-22!60;UBERON:0004537!2.62e-22!60;UBERON:0006965!2.62e-22!60;UBERON:0004573!2.76e-22!33;UBERON:0004571!2.76e-22!33;UBERON:0002385!2.36e-21!63;UBERON:0001015!2.36e-21!63;UBERON:0000383!2.36e-21!63;UBERON:0000486!3.38e-20!82;UBERON:0002049!9.90e-20!79;UBERON:0007798!9.90e-20!79;UBERON:0000055!4.76e-19!69;UBERON:0004535!2.13e-18!110;UBERON:0005256!2.27e-18!143;UBERON:0003914!7.27e-18!118;UBERON:0001009!1.62e-17!113;UBERON:0000490!2.88e-17!138;UBERON:0002100!3.32e-14!216;UBERON:0003104!3.02e-11!238;UBERON:0009142!3.02e-11!238;UBERON:0000926!1.15e-10!448;UBERON:0004120!1.15e-10!448;UBERON:0006603!1.15e-10!448;UBERON:0000483!2.67e-10!309;UBERON:0000992!5.09e-10!13;UBERON:0000119!5.27e-10!312;UBERON:0000948!1.14e-09!24;UBERON:0005498!1.14e-09!24;UBERON:0004140!1.14e-09!24;UBERON:0009881!1.14e-09!24;UBERON:0004141!1.14e-09!24;UBERON:0003084!1.14e-09!24;UBERON:0007005!1.14e-09!24;UBERON:0004139!1.14e-09!24;UBERON:0004291!1.14e-09!24;UBERON:0003834!2.82e-09!5;UBERON:0001533!2.82e-09!5;UBERON:0000477!1.17e-08!286;UBERON:0003498!1.34e-08!5;UBERON:0005985!1.34e-08!5;UBERON:0000025!2.36e-08!194;UBERON:0007100!3.67e-08!27;UBERON:0000481!5.79e-08!347;UBERON:0000947!8.36e-08!21;UBERON:0010191!8.36e-08!21;UBERON:0004111!9.50e-08!241;UBERON:0003513!1.05e-07!8;UBERON:0002118!1.21e-07!5;UBERON:0004532!1.21e-07!5;UBERON:0003134!1.42e-07!37;UBERON:0000474!1.42e-07!37;UBERON:0003100!2.54e-07!41;UBERON:0004237!3.18e-07!10;UBERON:0004695!3.18e-07!10;UBERON:0002111!3.18e-07!10;UBERON:0004178!3.18e-07!10;UBERON:0001310!3.41e-07!4;UBERON:0001135!3.51e-07!15;UBERON:0002119!4.04e-07!4;UBERON:0004531!4.04e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.42e-25;42!UBERON:0003509;2.42e-25;42!UBERON:0004572;2.42e-25;42!UBERON:0004573;3.82e-25;33!UBERON:0004571;3.82e-25;33!UBERON:0003834;1.47e-21;5!UBERON:0001533;1.47e-21;5!UBERON:0001310;2.69e-16;4!UBERON:0003513;2.57e-15;7!UBERON:0007500;6.43e-14;56!UBERON:0001981;6.43e-14;56!UBERON:0004537;6.43e-14;56!UBERON:0003498;2.14e-13;3!UBERON:0005985;2.14e-13;3!UBERON:0001621;2.14e-13;3!UBERON:0000948;7.35e-11;22!UBERON:0000055;9.08e-11;65!UBERON:0003914;1.21e-10;74!UBERON:0002119;4.13e-10;4!UBERON:0004237;4.48e-10;10!UBERON:0004695;4.48e-10;10!UBERON:0002111;4.48e-10;10!UBERON:0004178;4.48e-10;10!UBERON:0002456;5.05e-10;2!UBERON:0002049;1.93e-09;75!UBERON:0007798;1.93e-09;75!UBERON:0007100;2.13e-09;25!UBERON:0005396;2.58e-09;2!UBERON:0001135;3.30e-09;15!UBERON:0000992;8.98e-08;13!UBERON:0010260;2.74e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.83e-38,42;UBERON:0003509,1.83e-38,42;UBERON:0004572,1.83e-38,42;UBERON:0004872,2.45e-32,83;UBERON:0001134,1.32e-29,62;UBERON:0002036,1.32e-29,62;UBERON:0003082,1.32e-29,62;UBERON:0004573,5.74e-29,33;UBERON:0004571,5.74e-29,33;UBERON:0002385,1.68e-28,64;UBERON:0001015,1.68e-28,64;UBERON:0000383,1.68e-28,64;UBERON:0007500,7.33e-26,59;UBERON:0001981,7.33e-26,59;UBERON:0004537,7.33e-26,59;UBERON:0006965,7.33e-26,59;UBERON:0002329,3.98e-25,71;UBERON:0003059,3.98e-25,71;UBERON:0007282,3.98e-25,71;UBERON:0004290,3.98e-25,71;UBERON:0009618,3.98e-25,71;UBERON:0003077,1.07e-24,72;UBERON:0007285,1.07e-24,72;UBERON:0007524,2.78e-24,73;UBERON:0007503,2.33e-22,78;UBERON:0000055,9.52e-22,68;UBERON:0003834,1.11e-21,5;UBERON:0001533,1.11e-21,5;UBERON:0003914,7.17e-21,117;UBERON:0000486,1.14e-20,83;UBERON:0004535,2.71e-19,109;UBERON:0001009,1.32e-18,112;UBERON:0002049,2.69e-18,78;UBERON:0007798,2.69e-18,78;UBERON:0001310,2.93e-16,4;UBERON:0003513,2.11e-15,7;UBERON:0005256,4.64e-15,122;UBERON:0003498,2.01e-13,5;UBERON:0005985,2.01e-13,5;UBERON:0003104,2.05e-13,160;UBERON:0009142,2.05e-13,160;UBERON:0001621,2.34e-13,3;UBERON:0000490,1.52e-12,148;UBERON:0000948,3.00e-12,24;UBERON:0005498,3.00e-12,24;UBERON:0004140,3.00e-12,24;UBERON:0009881,3.00e-12,24;UBERON:0004141,3.00e-12,24;UBERON:0003084,3.00e-12,24;UBERON:0007005,3.00e-12,24;UBERON:0004139,3.00e-12,24;UBERON:0004291,3.00e-12,24;UBERON:0000926,3.33e-11,315;UBERON:0004120,3.33e-11,315;UBERON:0006603,3.33e-11,315;UBERON:0000025,5.48e-11,192;UBERON:0007100,1.04e-10,27;UBERON:0002100,2.25e-10,199;UBERON:0004237,3.96e-10,10;UBERON:0004695,3.96e-10,10;UBERON:0002111,3.96e-10,10;UBERON:0004178,3.96e-10,10;UBERON:0003081,4.12e-10,203;UBERON:0002119,4.34e-10,4;UBERON:0002456,5.07e-10,2;UBERON:0005396,2.64e-09,2;UBERON:0001135,2.68e-09,15;UBERON:0004111,4.42e-09,240;UBERON:0000992,1.02e-07,13;UBERON:0003134,1.63e-07,37;UBERON:0000474,1.63e-07,37;UBERON:0002204,1.72e-07,167;UBERON:0010260,2.84e-07,9;UBERON:0003133,9.01e-07,48 | |||
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|short_description=p@chr7:93518473..93518503,+ | |||
}} | }} |
Latest revision as of 12:36, 31 July 2015
Short description: | p@chr7:93518473..93518503, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93518473..93518503, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.82e-52 | 32 |
smooth muscle cell | 2.76e-41 | 43 |
smooth muscle myoblast | 2.76e-41 | 43 |
muscle cell | 4.15e-34 | 55 |
muscle precursor cell | 4.79e-32 | 58 |
myoblast | 4.79e-32 | 58 |
multi-potent skeletal muscle stem cell | 4.79e-32 | 58 |
electrically responsive cell | 3.47e-30 | 61 |
electrically active cell | 3.47e-30 | 61 |
smooth muscle cell of the subclavian artery | 1.11e-21 | 5 |
smooth muscle cell of the umbilical artery | 2.93e-16 | 4 |
cardiocyte | 2.42e-15 | 16 |
mesodermal cell | 8.22e-14 | 121 |
smooth muscle cell of the coronary artery | 2.34e-13 | 3 |
aortic smooth muscle cell | 3.96e-10 | 10 |
smooth muscle cell of the internal thoracic artery | 5.07e-10 | 2 |
smooth muscle cell of the carotid artery | 2.64e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.67e-13 | 3 |
leiomyoma | 1.67e-13 | 3 |
benign neoplasm | 3.09e-10 | 4 |
ovarian cancer | 7.01e-10 | 14 |