FFCP PHASE1:Hg19::chr9:94173455..94173468,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=4783 | |EntrezGene=4783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=7787 | |HGNC=7787 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q16649 | |UniProt=Q16649 | ||
|association_with_transcript=-406bp_to_BC008197_5end | |association_with_transcript=-406bp_to_BC008197_5end | ||
|cluster_id=chr9:94173455..94173468,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_NFIL3_5end | |description=CAGE_peak_4_at_NFIL3_5end |
Latest revision as of 06:26, 18 September 2015
Short description: | p4@NFIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFIL3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -406bp_to_BC008197_5end |
EntrezGene: | NFIL3 |
HGNC: | 7787 |
UniProt: | Q16649 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@NFIL3 |
---|
0
10
20
30
40
50
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.93e-73 | 72 |
classical monocyte | 1.08e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-71 | 42 |
defensive cell | 6.08e-62 | 48 |
phagocyte | 6.08e-62 | 48 |
monopoietic cell | 2.74e-48 | 59 |
monocyte | 2.74e-48 | 59 |
monoblast | 2.74e-48 | 59 |
promonocyte | 2.74e-48 | 59 |
macrophage dendritic cell progenitor | 1.58e-46 | 61 |
Showing 1 to 10 of 34 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.79e-45 | 98 |
blood island | 4.79e-45 | 98 |
hemolymphoid system | 3.15e-40 | 108 |
bone marrow | 3.28e-39 | 76 |
bone element | 6.63e-36 | 82 |
skeletal element | 3.55e-32 | 90 |
immune system | 6.10e-31 | 93 |
skeletal system | 2.40e-28 | 100 |
lateral plate mesoderm | 5.28e-18 | 203 |
musculoskeletal system | 1.79e-14 | 167 |
Showing 1 to 10 of 17 entries