FFCP PHASE1:Hg19::chr7:80551671..80551680,-: Difference between revisions
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|id=chr7:80551671..80551680,-
|short_description=p38@SEMA3C
|description=CAGE_peak_38_at_SEMA3C_5end
|association_with_transcript=0bp_to_ENST00000419255,ENST0000054...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt=Q99985,F5H1Z7 | |UniProt=Q99985,F5H1Z7 | ||
|association_with_transcript=0bp_to_ENST00000419255,ENST00000544525,uc011kgw.1_5end | |||
|cluster_id=chr7:80551671..80551680,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_38_at_SEMA3C_5end | |||
|id=chr7:80551671..80551680,- | |||
|ontology_enrichment_celltype=CL:0002076!4.04e-09!43;CL:0000223!4.98e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!7.47e-17!4;DOID:1612!7.47e-17!4;DOID:305!1.48e-08!106;DOID:3371!2.50e-08!1;DOID:4549!2.50e-08!1;DOID:5861!2.50e-08!1;DOID:6496!2.50e-08!1;DOID:7!6.27e-08!39;DOID:1749!6.37e-08!14;DOID:0050687!8.55e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.83e-66;4!DOID:1612;2.83e-66;4!DOID:299;1.06e-11;25!DOID:7;2.48e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.40e-66,4;DOID:1612,2.40e-66,4;DOID:299,1.03e-11,25;DOID:7,6.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000341!2.72e-15!2;UBERON:0000065!6.09e-14!53;UBERON:0005153!1.02e-13!37;UBERON:0000915!5.66e-12!52;UBERON:0001004!1.12e-11!72;UBERON:0000974!2.52e-11!10;UBERON:0004119!1.37e-09!169;UBERON:0000925!1.37e-09!169;UBERON:0006595!1.37e-09!169;UBERON:0005157!1.44e-09!51;UBERON:0005178!2.14e-09!34;UBERON:0002224!2.14e-09!34;UBERON:0005181!4.19e-09!35;UBERON:0004921!5.36e-09!129;UBERON:0004185!5.36e-09!129;UBERON:0002171!1.22e-08!1;UBERON:0006518!1.22e-08!1;UBERON:0008949!1.22e-08!1;UBERON:0000101!1.22e-08!1;UBERON:0002167!1.22e-08!1;UBERON:0008947!2.56e-08!38;UBERON:0003258!2.56e-08!38;UBERON:0000997!3.10e-08!1;UBERON:0005056!3.10e-08!1;UBERON:0004913!3.57e-08!1;UBERON:0003703!3.57e-08!1;UBERON:0001174!3.57e-08!1;UBERON:0004914!3.57e-08!1;UBERON:0001007!3.70e-08!155;UBERON:0001555!3.70e-08!155;UBERON:0007026!3.70e-08!155;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0002048!7.34e-08!22;UBERON:0000117!7.34e-08!22;UBERON:0000171!7.34e-08!22;UBERON:0000170!7.34e-08!22;UBERON:0005597!7.34e-08!22;UBERON:0000118!7.34e-08!22;UBERON:0000077!1.07e-07!130;UBERON:0003343!1.08e-07!4;UBERON:0004785!1.08e-07!4;UBERON:0000310!5.05e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.96e-34;2!UBERON:0000310;2.22e-27;10!UBERON:0001443;5.16e-25;11!UBERON:0000915;1.24e-11;52!UBERON:0003126;9.43e-11;7!UBERON:0001005;9.43e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.05e-34,2;UBERON:0000310,2.08e-27,10;UBERON:0001443,4.86e-25,11;UBERON:0000915,1.77e-12,52;UBERON:0003126,9.89e-11,7;UBERON:0001005,9.89e-11,7 | |||
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|short_description=p38@SEMA3C | |||
}} | }} |
Latest revision as of 17:31, 19 September 2015
Short description: | p38@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_SEMA3C_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 0bp_to_ENST00000419255, ENST00000544525, uc011kgw.1_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | Q99985F5H1Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.05e-34 | 2 |
breast | 2.08e-27 | 10 |
chest | 4.86e-25 | 11 |
thoracic segment of trunk | 1.77e-12 | 52 |
trachea | 9.89e-11 | 7 |
respiratory airway | 9.89e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.40e-66 | 4 |
breast cancer | 2.40e-66 | 4 |
adenocarcinoma | 1.03e-11 | 25 |
disease of anatomical entity | 6.60e-08 | 39 |