FFCP PHASE1:Hg19::chr7:641183..641217,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:641183..641217,-
|short_description=p7@PRKAR1B
|description=CAGE_peak_7_at_PRKAR1B_5end
|association_with_transcript=3bp_to_ENST00000340920,uc003six.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5575 | |EntrezGene=5575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9390 | |HGNC=9390 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NS41 | |UniProt=Q6NS41 | ||
|association_with_transcript=3bp_to_ENST00000340920,uc003six.1_5end | |||
|cluster_id=chr7:641183..641217,- | |||
|description=CAGE_peak_7_at_PRKAR1B_5end | |||
|id=chr7:641183..641217,- | |||
|ontology_enrichment_celltype=CL:0002057!9.85e-44!42;CL:0000860!3.40e-40!45;CL:0000766!3.64e-30!76;CL:0000839!1.20e-29!70;CL:0000557!4.29e-29!71;CL:0002031!1.38e-27!124;CL:0002194!1.51e-25!63;CL:0000576!1.51e-25!63;CL:0000040!1.51e-25!63;CL:0000559!1.51e-25!63;CL:0000738!1.51e-25!140;CL:0002009!1.68e-24!65;CL:0000988!2.66e-23!182;CL:0002087!2.78e-23!119;CL:0002032!7.02e-22!165;CL:0000837!7.02e-22!165;CL:0000037!1.92e-20!172;CL:0000566!1.92e-20!172;CL:0000763!1.23e-19!112;CL:0000049!1.23e-19!112;CL:0002274!1.05e-07!5;CL:0000457!1.05e-07!5;CL:0002191!1.05e-07!5;CL:0000097!1.05e-07!5;CL:0000831!1.05e-07!5;CL:0002028!1.05e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-33;33!CL:0002057;1.62e-33;33!CL:0000473;4.93e-21;39!CL:0000234;4.93e-21;39!CL:0000576;4.01e-20;48!CL:0000766;2.46e-10;69!CL:0002087;1.74e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.42e-33,42;CL:0002057,5.42e-33,42;CL:0000473,1.47e-28,48;CL:0000234,1.47e-28,48;CL:0000839,8.51e-23,66;CL:0000557,2.02e-22,67;CL:0002194,2.40e-22,59;CL:0000576,2.40e-22,59;CL:0000040,2.40e-22,59;CL:0000559,2.40e-22,59;CL:0002009,1.52e-21,61;CL:0000766,1.06e-20,72;CL:0002031,3.57e-17,120;CL:0002087,6.11e-16,115;CL:0000988,2.11e-15,177;CL:0000738,8.77e-15,136;CL:0000763,5.85e-13,108;CL:0000049,5.85e-13,108;CL:0002032,5.43e-12,161;CL:0000837,5.43e-12,161;CL:0000037,2.34e-11,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.22e-16;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.60e-16,2 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.67e-29!112;UBERON:0002371!2.82e-28!80;UBERON:0002390!6.11e-28!102;UBERON:0003061!6.11e-28!102;UBERON:0001474!1.36e-25!86;UBERON:0002405!1.15e-21!115;UBERON:0004765!2.69e-20!101;UBERON:0001434!2.69e-20!101;UBERON:0003081!9.42e-11!216;UBERON:0002204!2.65e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.11e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.24e-22,98;UBERON:0003061,7.24e-22,98;UBERON:0002193,1.47e-19,108;UBERON:0002371,1.75e-19,76;UBERON:0001474,7.07e-18,82;UBERON:0004765,4.59e-16,90;UBERON:0002405,1.83e-15,93;UBERON:0001434,3.34e-14,100;UBERON:0003081,6.61e-09,203;UBERON:0002331,8.11e-08,10;UBERON:0000358,8.11e-08,10;UBERON:0000307,8.11e-08,10;UBERON:0000091,8.11e-08,10;UBERON:0000087,8.11e-08,10;UBERON:0007010,8.11e-08,10;UBERON:0007806,8.11e-08,10;UBERON:0008780,8.11e-08,10;UBERON:0005728,8.11e-08,10;UBERON:0002204,1.90e-07,167 | |||
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| ||
|short_description=p7@PRKAR1B | |||
}} | }} |
Latest revision as of 04:33, 19 September 2015
Short description: | p7@PRKAR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKAR1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000340920, uc003six.1_5end |
EntrezGene: | PRKAR1B |
HGNC: | 9390 |
UniProt: | Q6NS41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.42e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.42e-33 | 42 |
defensive cell | 1.47e-28 | 48 |
phagocyte | 1.47e-28 | 48 |
myeloid lineage restricted progenitor cell | 8.51e-23 | 66 |
granulocyte monocyte progenitor cell | 2.02e-22 | 67 |
monopoietic cell | 2.40e-22 | 59 |
monocyte | 2.40e-22 | 59 |
monoblast | 2.40e-22 | 59 |
promonocyte | 2.40e-22 | 59 |
macrophage dendritic cell progenitor | 1.52e-21 | 61 |
myeloid leukocyte | 1.06e-20 | 72 |
hematopoietic lineage restricted progenitor cell | 3.57e-17 | 120 |
nongranular leukocyte | 6.11e-16 | 115 |
hematopoietic cell | 2.11e-15 | 177 |
leukocyte | 8.77e-15 | 136 |
myeloid cell | 5.85e-13 | 108 |
common myeloid progenitor | 5.85e-13 | 108 |
hematopoietic oligopotent progenitor cell | 5.43e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.43e-12 | 161 |
hematopoietic stem cell | 2.34e-11 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.24e-22 | 98 |
blood island | 7.24e-22 | 98 |
hemolymphoid system | 1.47e-19 | 108 |
bone marrow | 1.75e-19 | 76 |
bone element | 7.07e-18 | 82 |
skeletal element | 4.59e-16 | 90 |
immune system | 1.83e-15 | 93 |
skeletal system | 3.34e-14 | 100 |
lateral plate mesoderm | 6.61e-09 | 203 |
umbilical cord | 8.11e-08 | 10 |
blastocyst | 8.11e-08 | 10 |
blastula | 8.11e-08 | 10 |
bilaminar disc | 8.11e-08 | 10 |
inner cell mass | 8.11e-08 | 10 |
cleaving embryo | 8.11e-08 | 10 |
connecting stalk | 8.11e-08 | 10 |
inner cell mass derived epiblast | 8.11e-08 | 10 |
extraembryonic mesoderm | 8.11e-08 | 10 |
musculoskeletal system | 1.90e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.60e-16 | 2 |