FFCP PHASE1:Hg19::chr7:56230804..56230805,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:56230804..56230805,+
|short_description=p1@ENST00000442064
|description=CAGE_peak_1_at_ENST00000442064_5end
|association_with_transcript=-32bp_to_ENST00000...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000442064_5end | |||
|cluster_id=chr7:56230804..56230805,+ | |||
|coexpression_cluster_id=C2515 | |||
|description=CAGE_peak_1_at_ENST00000442064_5end | |||
|id=chr7:56230804..56230805,+ | |||
|ontology_enrichment_celltype=CL:0000183!5.82e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002595;2.17e-07;5!CL:0000359;4.22e-07;32!CL:0000192;8.07e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.46e-08,121;CL:0000192,9.27e-08,43;CL:0000514,9.27e-08,43;CL:0002595,2.51e-07,5;CL:0000359,4.46e-07,32;CL:0000187,4.85e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;8.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.03e-07!365;UBERON:0000483!1.47e-07!309;UBERON:0004111!1.82e-07!241;UBERON:0000119!1.95e-07!312;UBERON:0000477!3.83e-07!286;UBERON:0007023!6.58e-07!115;UBERON:0000467!9.57e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.17e-07;5!UBERON:0001533;2.17e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.37e-07,199;UBERON:0003834,2.51e-07,5;UBERON:0001533,2.51e-07,5;UBERON:0002049,9.03e-07,78;UBERON:0007798,9.03e-07,78 | |||
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| ||
|short_description=p1@ENST00000442064 | |||
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Latest revision as of 10:57, 31 July 2015
Short description: | p1@ENST00000442064 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000442064_5end |
Coexpression cluster: | C2515_Fibroblast_mesenchymal_Pericytes_Lymphatic_Smooth_Synoviocyte_Hair |
Association with transcript: | -32bp_to_ENST00000442064_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.46e-08 | 121 |
smooth muscle cell | 9.27e-08 | 43 |
smooth muscle myoblast | 9.27e-08 | 43 |
smooth muscle cell of the subclavian artery | 2.51e-07 | 5 |
vascular associated smooth muscle cell | 4.46e-07 | 32 |
muscle cell | 4.85e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.37e-07 | 199 |
thoracic segment blood vessel | 2.51e-07 | 5 |
subclavian artery | 2.51e-07 | 5 |
vasculature | 9.03e-07 | 78 |
vascular system | 9.03e-07 | 78 |