FFCP PHASE1:Hg19::chr7:41728018..41728036,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:41728018..41728036,-
|short_description=p@chr7:41728018..41728036,-
|description=CAGE_peak_at_chr7:41728018..41728036,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:41728018..41728036,- | |||
|coexpression_cluster_id=C775 | |||
|description=CAGE_peak_at_chr7:41728018..41728036,- | |||
|id=chr7:41728018..41728036,- | |||
|ontology_enrichment_celltype=CL:0002334!7.57e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.58e-09;3!CL:0002580;5.95e-09;3!CL:0002334;2.37e-08;12!CL:0002616;1.00e-07;1!CL:0000511;2.49e-07;1!CL:0002625;2.49e-07;1!CL:0002568;2.49e-07;1!CL:0000216;2.49e-07;1!CL:0000134;2.93e-07;55!CL:0000569;6.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.82e-09,3;CL:0002580,5.51e-09,3;CL:0002334,2.75e-08,12;CL:0002616,8.54e-08,1;CL:0002568,1.33e-07,1;CL:0000511,1.72e-07,1;CL:0002625,1.72e-07,1;CL:0000216,1.72e-07,1;CL:0000569,7.06e-07,4;CL:0000011,7.06e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;6.44e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!1.29e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.47e-20;14!DOID:120;2.99e-10;27!DOID:193;1.74e-09;29!DOID:2513;6.79e-08;1!DOID:3571;7.99e-08;1!DOID:4235;2.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.61e-21,14;DOID:120,2.42e-10,27;DOID:193,1.44e-09,29;DOID:2513,7.03e-08,1;DOID:3571,8.00e-08,1;DOID:4235,1.42e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.06e-11;13!UBERON:0002118;1.11e-11;5!UBERON:0003688;5.04e-10;6!UBERON:0002358;5.04e-10;6!UBERON:0003684;5.04e-10;6!UBERON:0001178;5.04e-10;6!UBERON:0000991;5.25e-10;21!UBERON:0001136;2.49e-07;1!UBERON:0001343;2.49e-07;1!UBERON:0004910;2.49e-07;1!UBERON:0004813;2.49e-07;1!UBERON:0002119;4.15e-07;4!UBERON:0004457;7.99e-07;9!UBERON:0000042;7.99e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,5.78e-12,5;UBERON:0000992,7.12e-12,13;UBERON:0000991,3.57e-10,21;UBERON:0009196,3.57e-10,21;UBERON:0009117,3.57e-10,21;UBERON:0005564,3.57e-10,21;UBERON:0003688,7.27e-10,6;UBERON:0002358,7.27e-10,6;UBERON:0003684,7.27e-10,6;UBERON:0001178,7.27e-10,6;UBERON:0004176,1.10e-09,22;UBERON:0002323,1.84e-09,46;UBERON:0004458,8.60e-09,49;UBERON:0003886,7.64e-08,54;UBERON:0001136,1.72e-07,1;UBERON:0001343,1.72e-07,1;UBERON:0004910,1.72e-07,1;UBERON:0005154,1.72e-07,1;UBERON:0005295,1.72e-07,1;UBERON:0004813,1.72e-07,1;UBERON:0005297,1.72e-07,1;UBERON:0005294,1.72e-07,1;UBERON:0010141,1.72e-07,1;UBERON:0005891,1.72e-07,1;UBERON:0002384,1.72e-07,371;UBERON:0002119,4.22e-07,4;UBERON:0002553,8.88e-07,61 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.422863212287913,2.00146596706261,0,2.61701557230111,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0,0.962787081228281,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0,2.43317435151318,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.264818361626438,0.860509862246441,0,1.12135520028461,0,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,1.35214253015937,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0.57978255948989,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,1.80980402060889,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.599837947092342,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,1.68808170616869,1.12264037773229,0.128139149255701,1.02341449813341,8.84696566289841,0,0.154209693802656,0.355123450626254,0,0,0.348631135379878,0,0.601519410909855,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0,0,0,1.25924938732256,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0,0,0,0.405820753925408,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.556543525114529,0,0,0,0,0,0.102268682502155,0,8.3980688668688,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.480952921509202,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.947015026375446,0,0,0.228840068396924,0.151230923763239,1.24349760466224,1.18284119991707,2.23015474029183,0,1.24210365501008,0,1.06336685823198,1.5652351854352,0.300515217994437,0,1.62748293281865,5.09176245767166,0.644463342254931,0,1.99047944349308,0,0,0,0,0,0,0,0.453411851024545,0,0.244736704506468,0,0,0.657852148736121,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0.19998739585493,0,0,0,0.552317850755522,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828324005113957,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0.342233301085281,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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|phase1_expression=1.45342703416445,0.642301571672949,0.422863212287913,2.00146596706261,0,2.61701557230111,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0,0.962787081228281,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0,2.43317435151318,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.264818361626438,0.860509862246441,0,1.12135520028461,0,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,1.35214253015937,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0.57978255948989,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,1.80980402060889,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.599837947092342,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,1.68808170616869,1.12264037773229,0.128139149255701,1.02341449813341,8.84696566289841,0,0.154209693802656,0.355123450626254,0,0,0.348631135379878,0,0.601519410909855,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0.574265537996172,0,1.6068392984416,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0,0,0,1.25924938732256,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0,0,0,0.405820753925408,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.556543525114529,0,0,0,0,0,0.102268682502155,0,8.3980688668688,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.480952921509202,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.947015026375446,0,0,0.228840068396924,0.151230923763239,1.24349760466224,1.18284119991707,2.23015474029183,0,1.24210365501008,0,1.06336685823198,1.5652351854352,0.300515217994437,0,1.62748293281865,5.09176245767166,0.644463342254931,0,1.99047944349308,0,0,0,0,0,0,0,0.453411851024545,0,0.244736704506468,0,0,0.657852148736121,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0.211312123358627,0.19998739585493,0,0,0,0.552317850755522,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828324005113957,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0.342233301085281,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:41728018..41728036,- | |||
}} | }} |
Latest revision as of 10:01, 31 July 2015
Short description: | p@chr7:41728018..41728036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:41728018..41728036, - |
Coexpression cluster: | C775_hepatic_Preadipocyte_Mallassezderived_mesenchymal_Smooth_spindle_pagetoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.82e-09 | 3 |
preadipocyte of the breast | 5.51e-09 | 3 |
preadipocyte | 2.75e-08 | 12 |
perirenal adipocyte cell | 8.54e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 1.33e-07 | 1 |
androgen binding protein secreting cell | 1.72e-07 | 1 |
seminiferous tubule epithelial cell | 1.72e-07 | 1 |
Sertoli cell | 1.72e-07 | 1 |
cardiac mesenchymal cell | 7.06e-07 | 4 |
migratory trunk neural crest cell | 7.06e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 5.78e-12 | 5 |
female gonad | 7.12e-12 | 13 |
gonad | 3.57e-10 | 21 |
indifferent external genitalia | 3.57e-10 | 21 |
indifferent gonad | 3.57e-10 | 21 |
gonad primordium | 3.57e-10 | 21 |
omentum | 7.27e-10 | 6 |
peritoneum | 7.27e-10 | 6 |
abdominal cavity | 7.27e-10 | 6 |
visceral peritoneum | 7.27e-10 | 6 |
external genitalia | 1.10e-09 | 22 |
body cavity | 1.84e-09 | 46 |
body cavity or lining | 8.60e-09 | 49 |
body cavity precursor | 7.64e-08 | 54 |
mesothelium | 1.72e-07 | 1 |
seminiferous tubule of testis | 1.72e-07 | 1 |
epithelium of male gonad | 1.72e-07 | 1 |
epithelial cord | 1.72e-07 | 1 |
sex cord | 1.72e-07 | 1 |
seminiferous tubule epithelium | 1.72e-07 | 1 |
testis sex cord | 1.72e-07 | 1 |
genital ridge | 1.72e-07 | 1 |
primitive sex cord of indifferent gonad | 1.72e-07 | 1 |
coelomic epithelium | 1.72e-07 | 1 |
connective tissue | 1.72e-07 | 371 |
left ovary | 4.22e-07 | 4 |
anatomical cavity | 8.88e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.61e-21 | 14 |
female reproductive organ cancer | 2.42e-10 | 27 |
reproductive organ cancer | 1.44e-09 | 29 |
basal cell carcinoma | 7.03e-08 | 1 |
liver cancer | 8.00e-08 | 1 |
spindle cell sarcoma | 1.42e-07 | 1 |