FFCP PHASE1:Hg19::chr7:41726036..41726056,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:41726036..41726056,-
|short_description=p@chr7:41726036..41726056,-
|description=CAGE_peak_at_chr7:41726036..41726056,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:41726036..41726056,- | |||
|coexpression_cluster_id=C775 | |||
|description=CAGE_peak_at_chr7:41726036..41726056,- | |||
|id=chr7:41726036..41726056,- | |||
|ontology_enrichment_celltype=CL:0000055!3.08e-10!180;CL:0002334!2.22e-09!12;CL:0000057!9.55e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002593;9.49e-14;2!CL:0002579;1.43e-09;3!CL:0000511;1.63e-07;1!CL:0002625;1.63e-07;1!CL:0002568;1.63e-07;1!CL:0000216;1.63e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.35e-13,2;CL:0002579,2.05e-09,3;CL:0000511,1.01e-07,1;CL:0002625,1.01e-07,1;CL:0000216,1.01e-07,1;CL:0002568,2.63e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.61e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.50e-15;14!DOID:3571;4.56e-08;1!DOID:2513;6.36e-08;1!DOID:3369;6.36e-08;1!DOID:4235;6.36e-08;1!DOID:120;8.30e-08;27!DOID:193;3.13e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.28e-15,14;DOID:3571,4.57e-08,1;DOID:2513,5.22e-08,1;DOID:3369,5.96e-08,1;DOID:4235,7.26e-08,1;DOID:120,7.65e-08,27;DOID:193,2.90e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.09e-08!6;UBERON:0002358!1.09e-08!6;UBERON:0003684!1.09e-08!6;UBERON:0001178!1.09e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;9.49e-14;2!UBERON:0002118;6.05e-12;5!UBERON:0003688;4.06e-10;6!UBERON:0002358;4.06e-10;6!UBERON:0003684;4.06e-10;6!UBERON:0001178;4.06e-10;6!UBERON:0000992;6.68e-08;13!UBERON:0001136;1.63e-07;1!UBERON:0001343;1.63e-07;1!UBERON:0004910;1.63e-07;1!UBERON:0004813;1.63e-07;1!UBERON:0000991;2.89e-07;21!UBERON:0004457;6.83e-07;9!UBERON:0000042;6.83e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.35e-13,2;UBERON:0002118,4.84e-12,5;UBERON:0003688,7.33e-10,6;UBERON:0002358,7.33e-10,6;UBERON:0003684,7.33e-10,6;UBERON:0001178,7.33e-10,6;UBERON:0000992,6.17e-08,13;UBERON:0001136,1.01e-07,1;UBERON:0001343,1.01e-07,1;UBERON:0004910,1.01e-07,1;UBERON:0005154,1.01e-07,1;UBERON:0005295,1.01e-07,1;UBERON:0004813,1.01e-07,1;UBERON:0005297,1.01e-07,1;UBERON:0005294,1.01e-07,1;UBERON:0010141,1.01e-07,1;UBERON:0005891,1.01e-07,1;UBERON:0002323,1.45e-07,46;UBERON:0000991,2.45e-07,21;UBERON:0009196,2.45e-07,21;UBERON:0009117,2.45e-07,21;UBERON:0005564,2.45e-07,21;UBERON:0004458,4.94e-07,49;UBERON:0004176,5.42e-07,22 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.563817616383885,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,2.70852973188684,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,1.24564449799115,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.01392563272577,0.795285947051099,3.40644409211845,0.0945348171640679,0,0.175669571386252,0,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,0.25326102332916,0,0,0.354668382198357,0,0,1.48000529050296,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,0.901428353439581,0.113432183160021,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0.843881661206331,0.0974370051611986,0,0.184099797284599,0,0,0,0,0.966304265816484,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,1.03417372606222,0,0.845302752556,1.86156681609409,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0.992431231275107,1.07423381301644,0.561320188866147,0.768834895534206,1.02341449813341,7.72098821489316,0,0.462629081407967,0.532685175939381,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0.255225424989168,0,0,1.25924938732256,0,0,0,0,0.74129687641568,0,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0,0.235624804691373,0,1.58510321173008,0,0,2.19342140668156,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,2.79935628895627,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,6.12509802022086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0.932623203496683,1.33069634990671,1.11507737014592,0,0.155262956876259,0.414706207840855,1.86089200190596,1.04349012362347,0,0.761610424337591,1.22061219961398,2.18218391043071,0.537052785212442,0,1.59238355479446,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0.425149840203366,0,0,0.636008701306837,0,0.80057074828547,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.90691047733584,0,0,0,2.0170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0.0852134047591577,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,2.0391253762538,0,0,0,0,1.05868461514708,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0.217716747896961,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.726713517082227,0.642301571672949,0.563817616383885,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,2.70852973188684,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,1.24564449799115,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.01392563272577,0.795285947051099,3.40644409211845,0.0945348171640679,0,0.175669571386252,0,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,0.25326102332916,0,0,0.354668382198357,0,0,1.48000529050296,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0.30648779579902,0.901428353439581,0.113432183160021,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0.843881661206331,0.0974370051611986,0,0.184099797284599,0,0,0,0,0.966304265816484,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,1.03417372606222,0,0.845302752556,1.86156681609409,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0.992431231275107,1.07423381301644,0.561320188866147,0.768834895534206,1.02341449813341,7.72098821489316,0,0.462629081407967,0.532685175939381,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0.255225424989168,0,0,1.25924938732256,0,0,0,0,0.74129687641568,0,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0,0.235624804691373,0,1.58510321173008,0,0,2.19342140668156,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0.35667105148125,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,2.79935628895627,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.51595809741485,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,6.12509802022086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0,0,0.864221491201268,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0.932623203496683,1.33069634990671,1.11507737014592,0,0.155262956876259,0.414706207840855,1.86089200190596,1.04349012362347,0,0.761610424337591,1.22061219961398,2.18218391043071,0.537052785212442,0,1.59238355479446,0,0.343395705182793,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0.425149840203366,0,0,0.636008701306837,0,0.80057074828547,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.90691047733584,0,0,0,2.0170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0.0852134047591577,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,2.0391253762538,0,0,0,0,1.05868461514708,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0.217716747896961,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:41726036..41726056,- | |||
}} | }} |
Latest revision as of 10:01, 31 July 2015
Short description: | p@chr7:41726036..41726056, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:41726036..41726056, - |
Coexpression cluster: | C775_hepatic_Preadipocyte_Mallassezderived_mesenchymal_Smooth_spindle_pagetoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.35e-13 | 2 |
omentum preadipocyte | 2.05e-09 | 3 |
androgen binding protein secreting cell | 1.01e-07 | 1 |
seminiferous tubule epithelial cell | 1.01e-07 | 1 |
Sertoli cell | 1.01e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.63e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.35e-13 | 2 |
right ovary | 4.84e-12 | 5 |
omentum | 7.33e-10 | 6 |
peritoneum | 7.33e-10 | 6 |
abdominal cavity | 7.33e-10 | 6 |
visceral peritoneum | 7.33e-10 | 6 |
female gonad | 6.17e-08 | 13 |
mesothelium | 1.01e-07 | 1 |
seminiferous tubule of testis | 1.01e-07 | 1 |
epithelium of male gonad | 1.01e-07 | 1 |
epithelial cord | 1.01e-07 | 1 |
sex cord | 1.01e-07 | 1 |
seminiferous tubule epithelium | 1.01e-07 | 1 |
testis sex cord | 1.01e-07 | 1 |
genital ridge | 1.01e-07 | 1 |
primitive sex cord of indifferent gonad | 1.01e-07 | 1 |
coelomic epithelium | 1.01e-07 | 1 |
body cavity | 1.45e-07 | 46 |
gonad | 2.45e-07 | 21 |
indifferent external genitalia | 2.45e-07 | 21 |
indifferent gonad | 2.45e-07 | 21 |
gonad primordium | 2.45e-07 | 21 |
body cavity or lining | 4.94e-07 | 49 |
external genitalia | 5.42e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.28e-15 | 14 |
liver cancer | 4.57e-08 | 1 |
basal cell carcinoma | 5.22e-08 | 1 |
peripheral primitive neuroectodermal tumor | 5.96e-08 | 1 |
spindle cell sarcoma | 7.26e-08 | 1 |
female reproductive organ cancer | 7.65e-08 | 27 |
reproductive organ cancer | 2.90e-07 | 29 |