FFCP PHASE1:Hg19::chr7:28220198..28220269,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:28220198..28220269,-
|short_description=p2@JAZF1
|description=CAGE_peak_2_at_JAZF1_5end
|association_with_transcript=0bp_to_ENST00000454041_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221895 | |EntrezGene=221895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28917 | |HGNC=28917 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCD3 | |UniProt=F8WCD3 | ||
|association_with_transcript=0bp_to_ENST00000454041_5end | |||
|cluster_id=chr7:28220198..28220269,- | |||
|description=CAGE_peak_2_at_JAZF1_5end | |||
|id=chr7:28220198..28220269,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-23!115;UBERON:0001017!2.04e-19!82;UBERON:0000073!3.13e-18!94;UBERON:0001016!3.13e-18!94;UBERON:0005743!5.46e-18!86;UBERON:0000955!9.41e-17!69;UBERON:0006238!9.41e-17!69;UBERON:0002616!3.44e-15!59;UBERON:0001049!9.94e-15!57;UBERON:0005068!9.94e-15!57;UBERON:0006241!9.94e-15!57;UBERON:0007135!9.94e-15!57;UBERON:0003080!2.03e-13!42;UBERON:0002780!5.69e-13!41;UBERON:0001890!5.69e-13!41;UBERON:0006240!5.69e-13!41;UBERON:0001869!6.14e-12!32;UBERON:0001893!8.18e-12!34;UBERON:0002020!9.06e-12!34;UBERON:0003528!9.06e-12!34;UBERON:0002791!2.15e-11!33;UBERON:0002619!2.18e-11!22;UBERON:0001950!1.44e-10!20;UBERON:0000956!1.95e-10!25;UBERON:0000203!1.95e-10!25;UBERON:0003075!2.45e-09!86;UBERON:0007284!2.45e-09!86;UBERON:0002346!1.43e-08!90;UBERON:0004121!3.73e-08!169;UBERON:0003056!4.60e-08!61;UBERON:0000153!5.42e-08!129;UBERON:0007811!5.42e-08!129;UBERON:0000033!8.23e-08!123;UBERON:0000924!1.04e-07!173;UBERON:0006601!1.04e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.13e-11;22!UBERON:0001869;6.53e-11;32!UBERON:0001950;1.43e-10;20!UBERON:0002791;1.67e-10;32!UBERON:0000956;2.15e-10;25!UBERON:0000203;2.15e-10;25!UBERON:0003528;2.26e-10;34!UBERON:0002020;2.26e-10;34!UBERON:0001893;2.94e-10;34!UBERON:0002780;9.14e-10;41!UBERON:0001890;9.14e-10;41!UBERON:0000073;3.55e-08;53!UBERON:0002616;3.55e-08;53!UBERON:0001017;3.63e-08;75!UBERON:0000955;6.43e-08;68!UBERON:0001016;4.40e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.76e-23,114;UBERON:0001016,3.89e-19,89;UBERON:0001017,5.52e-19,81;UBERON:0000955,2.51e-16,68;UBERON:0006238,2.51e-16,68;UBERON:0001049,2.66e-14,56;UBERON:0005068,2.66e-14,56;UBERON:0006241,2.66e-14,56;UBERON:0007135,2.66e-14,56;UBERON:0000073,2.54e-13,53;UBERON:0002616,2.54e-13,53;UBERON:0002780,5.58e-13,41;UBERON:0001890,5.58e-13,41;UBERON:0003080,5.58e-13,41;UBERON:0006240,5.58e-13,41;UBERON:0001869,6.03e-12,32;UBERON:0001893,8.04e-12,34;UBERON:0003528,8.90e-12,34;UBERON:0002020,8.90e-12,34;UBERON:0002791,2.04e-11,32;UBERON:0002619,2.15e-11,22;UBERON:0001950,1.42e-10,20;UBERON:0000956,1.92e-10,25;UBERON:0000203,1.92e-10,25;UBERON:0003075,7.61e-10,82;UBERON:0007284,7.61e-10,82;UBERON:0002346,5.31e-09,86;UBERON:0011216,1.45e-08,223;UBERON:0004121,2.56e-08,171;UBERON:0000924,2.56e-08,171;UBERON:0006601,2.56e-08,171;UBERON:0003056,7.15e-08,61;UBERON:0010314,9.80e-08,132 | |||
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| ||
|short_description=p2@JAZF1 | |||
}} | }} |
Latest revision as of 03:02, 18 September 2015
Short description: | p2@JAZF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JAZF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000454041_5end |
EntrezGene: | JAZF1 |
HGNC: | 28917 |
UniProt: | F8WCD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.76e-23 | 114 |
nervous system | 3.89e-19 | 89 |
central nervous system | 5.52e-19 | 81 |
brain | 2.51e-16 | 68 |
future brain | 2.51e-16 | 68 |
neural tube | 2.66e-14 | 56 |
neural rod | 2.66e-14 | 56 |
future spinal cord | 2.66e-14 | 56 |
neural keel | 2.66e-14 | 56 |
regional part of nervous system | 2.54e-13 | 53 |
regional part of brain | 2.54e-13 | 53 |
regional part of forebrain | 5.58e-13 | 41 |
forebrain | 5.58e-13 | 41 |
anterior neural tube | 5.58e-13 | 41 |
future forebrain | 5.58e-13 | 41 |
cerebral hemisphere | 6.03e-12 | 32 |
telencephalon | 8.04e-12 | 34 |
brain grey matter | 8.90e-12 | 34 |
gray matter | 8.90e-12 | 34 |
regional part of telencephalon | 2.04e-11 | 32 |
regional part of cerebral cortex | 2.15e-11 | 22 |
neocortex | 1.42e-10 | 20 |
cerebral cortex | 1.92e-10 | 25 |
pallium | 1.92e-10 | 25 |
neural plate | 7.61e-10 | 82 |
presumptive neural plate | 7.61e-10 | 82 |
neurectoderm | 5.31e-09 | 86 |
organ system subdivision | 1.45e-08 | 223 |
ectoderm-derived structure | 2.56e-08 | 171 |
ectoderm | 2.56e-08 | 171 |
presumptive ectoderm | 2.56e-08 | 171 |
pre-chordal neural plate | 7.15e-08 | 61 |
structure with developmental contribution from neural crest | 9.80e-08 | 132 |