FFCP PHASE1:Hg19::chr7:22771052..22771099,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:22771052..22771099,-
|short_description=p@chr7:22771052..22771099,-
|description=CAGE_peak_at_chr7:22771052..22771099,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:22771052..22771099,- | |||
|coexpression_cluster_id=C4675 | |||
|description=CAGE_peak_at_chr7:22771052..22771099,- | |||
|id=chr7:22771052..22771099,- | |||
|ontology_enrichment_celltype=CL:0000055!5.89e-12!180;CL:0000359!9.46e-12!32;CL:0000048!1.38e-11!430;CL:0000723!6.08e-11!436;CL:0000034!4.04e-10!444;CL:0000192!9.69e-10!42;CL:0000514!9.69e-10!42;CL:0002334!3.07e-09!12;CL:0000548!6.28e-09!679;CL:0000004!6.28e-09!679;CL:0000255!6.28e-09!679;CL:0000012!1.13e-08!682;CL:0002494!1.63e-08!16;CL:0000057!1.78e-08!75;CL:0000187!6.58e-08!54;CL:0000680!1.04e-07!57;CL:0000056!1.04e-07!57;CL:0000355!1.04e-07!57;CL:0000144!3.43e-07!625;CL:0002371!5.24e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-20;32!CL:0002494;3.26e-12;16!CL:0000569;3.33e-12;4!CL:0000192;3.50e-11;43!CL:0002595;4.22e-10;5!CL:0002334;2.62e-07;12!CL:0002593;3.12e-07;2!CL:0002539;6.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.24e-20,32;CL:0000192,3.08e-14,43;CL:0000514,3.08e-14,43;CL:0000569,2.40e-12,4;CL:0000011,2.40e-12,4;CL:0002494,2.56e-12,16;CL:0000048,1.36e-11,427;CL:0000723,3.14e-11,433;CL:0000034,9.23e-11,441;CL:0000187,3.19e-10,55;CL:0002595,4.29e-10,5;CL:0000680,1.74e-09,58;CL:0000056,1.74e-09,58;CL:0000355,1.74e-09,58;CL:0000393,7.99e-09,61;CL:0000211,7.99e-09,61;CL:0002334,3.04e-07,12;CL:0002593,3.26e-07,2;CL:0002539,7.75e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000011;3.33e-12;4!CL:0000514;3.50e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!2.91e-14!14;DOID:193!1.95e-10!29;DOID:120!2.07e-10!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.81e-12;14!DOID:120;6.90e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.34e-12,14;DOID:120,6.91e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.79e-13!42;UBERON:0003509!1.79e-13!42;UBERON:0004572!1.79e-13!42;UBERON:0004573!2.09e-13!33;UBERON:0004571!2.09e-13!33;UBERON:0004872!4.71e-13!84;UBERON:0001009!1.93e-10!113;UBERON:0004535!6.73e-10!110;UBERON:0001981!3.23e-09!60;UBERON:0007500!3.23e-09!60;UBERON:0004537!3.23e-09!60;UBERON:0006965!3.23e-09!60;UBERON:0000055!5.54e-09!69;UBERON:0002049!8.09e-08!79;UBERON:0007798!8.09e-08!79;UBERON:0000992!1.45e-07!13;UBERON:0003914!2.87e-07!118;UBERON:0007100!4.64e-07!27;UBERON:0003081!7.02e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.89e-15;33!UBERON:0004571;7.89e-15;33!UBERON:0001637;4.55e-12;42!UBERON:0003509;4.55e-12;42!UBERON:0004572;4.55e-12;42!UBERON:0003513;1.88e-10;7!UBERON:0003834;4.22e-10;5!UBERON:0001533;4.22e-10;5!UBERON:0000948;2.04e-08;22!UBERON:0000992;1.64e-07;13!UBERON:0002119;2.31e-07;4!UBERON:0002456;3.12e-07;2!UBERON:0007100;3.29e-07;25!UBERON:0007500;4.24e-07;56!UBERON:0001981;4.24e-07;56!UBERON:0004537;4.24e-07;56!UBERON:0004237;6.93e-07;10!UBERON:0004695;6.93e-07;10!UBERON:0002111;6.93e-07;10!UBERON:0004178;6.93e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.79e-17,83;UBERON:0001637,1.10e-16,42;UBERON:0003509,1.10e-16,42;UBERON:0004572,1.10e-16,42;UBERON:0004573,1.61e-15,33;UBERON:0004571,1.61e-15,33;UBERON:0003914,3.23e-12,117;UBERON:0007500,6.27e-12,59;UBERON:0001981,6.27e-12,59;UBERON:0004537,6.27e-12,59;UBERON:0006965,6.27e-12,59;UBERON:0004535,2.72e-11,109;UBERON:0000055,5.71e-11,68;UBERON:0003081,7.08e-11,203;UBERON:0001009,8.24e-11,112;UBERON:0003513,1.81e-10,7;UBERON:0003834,4.29e-10,5;UBERON:0001533,4.29e-10,5;UBERON:0000948,2.31e-09,24;UBERON:0005498,2.31e-09,24;UBERON:0004140,2.31e-09,24;UBERON:0009881,2.31e-09,24;UBERON:0004141,2.31e-09,24;UBERON:0003084,2.31e-09,24;UBERON:0007005,2.31e-09,24;UBERON:0004139,2.31e-09,24;UBERON:0004291,2.31e-09,24;UBERON:0000926,2.53e-09,315;UBERON:0004120,2.53e-09,315;UBERON:0006603,2.53e-09,315;UBERON:0002049,6.00e-09,78;UBERON:0007798,6.00e-09,78;UBERON:0002204,7.06e-09,167;UBERON:0001134,1.28e-08,62;UBERON:0002036,1.28e-08,62;UBERON:0003082,1.28e-08,62;UBERON:0002385,3.16e-08,64;UBERON:0001015,3.16e-08,64;UBERON:0000383,3.16e-08,64;UBERON:0000486,3.33e-08,83;UBERON:0007100,4.20e-08,27;UBERON:0000992,1.76e-07,13;UBERON:0002119,2.31e-07,4;UBERON:0002456,3.26e-07,2;UBERON:0002329,4.85e-07,71;UBERON:0003059,4.85e-07,71;UBERON:0007282,4.85e-07,71;UBERON:0004290,4.85e-07,71;UBERON:0009618,4.85e-07,71;UBERON:0003077,6.85e-07,72;UBERON:0007285,6.85e-07,72;UBERON:0004237,7.75e-07,10;UBERON:0004695,7.75e-07,10;UBERON:0002111,7.75e-07,10;UBERON:0004178,7.75e-07,10;UBERON:0007524,9.57e-07,73 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,3.36162573225888,2.41077811209591,2.19093027116212,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.863077176966451,0.256160706529101,0,4.82643953031266,0.645484683583826,1.35426486594342,0,0,0,13.7737751566906,0.641858054152187,2.55734850319616,0,0,0,43.8215950329162,9.07816359505824,5.60540024096017,0,0,0,22.3997815974346,3.68277635987565,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,1.44846518960824,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0,0,0,0,0,0,0,6.95760732373446,0.759783069987479,3.04541115870403,0.286836620748814,0.354668382198357,1.68203280042692,1.06748995729705,1.97334038733728,0,0.942974704487816,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,3.70900393917835,0,0,0,0,0,0,0.30648779579902,2.70428506031874,0.680593098960126,0.358779271377724,0,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,1.85194205030644,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0,2.48107807818777,0.61384789315225,1.12264037773229,0.768834895534206,0.511707249066704,2.57366273829772,0,0.308419387605311,1.59805552781814,0.0821271560138091,1.03850885836724,1.39452454151951,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0.10115778085555,0.929691098594572,2.51849877464512,0,4.31247012246524,0,0,1.11194531462352,1.5743737541619,0,0,0.571890581771475,0,0,0.318203247925937,6.27958912159384,0,0,0.117812402345686,1.2130948894399,0,1.26377536871694,0,30.2204727142793,4.22600587027022,0.136499911407986,0.424216295861138,1.13008116620243,0,10.6150236038595,3.5076070820301,0,0,1.42037263873893,1.239293992399,0,0,0,0,0,5.9110137883346,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0.398495976502139,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.1153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,1.46909527343233,0,0,0,0,0,0,0.494255755786011,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0.146178634172371,0,0.0969890164884194,0,0,0.274083849293502,2.58328995213887,0,0,1.12222348352147,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,1.05154941711726,0,0,0,0.199679000498991,0.429226048136571,0,0,9.7280968556449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,5.1993328406525,0.767660789277781,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,1.6468607378872,0,0,0.597019211547496,2.33713309847224,0,2.84104507912634,0.754703705257725,0,4.80564143633539,1.66354016139563,9.79254363671517,29.1274645479579,3.34523211043775,35.9842489730884,3.57104800815397,0.829412415681711,1.32920857278997,0.521745061811734,5.7097891418943,0.761610424337591,0.406870733204662,6.7284003904947,3.43713782535963,0.928067519756987,1.19428766609585,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,3.19504781379835,0,0,0,0,0,0.920529751259204,0,0,0,0,0.157265941855896,0,0,0,0,0,1.90802610392051,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0.20170506870352,0,0,3.76675410273223,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0.647782773655864,0.47775168788705,0,0,0,0,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.932388670104793,0,0.08140326861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| ||
|short_description=p@chr7:22771052..22771099,- | |||
}} | }} |
Latest revision as of 08:37, 31 July 2015
Short description: | p@chr7:22771052..22771099, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:22771052..22771099, - |
Coexpression cluster: | C4675_CD14_mesenchymal_Smooth_gall_hepatic_papillary_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.24e-20 | 32 |
smooth muscle cell | 3.08e-14 | 43 |
smooth muscle myoblast | 3.08e-14 | 43 |
cardiac mesenchymal cell | 2.40e-12 | 4 |
migratory trunk neural crest cell | 2.40e-12 | 4 |
cardiocyte | 2.56e-12 | 16 |
multi fate stem cell | 1.36e-11 | 427 |
somatic stem cell | 3.14e-11 | 433 |
stem cell | 9.23e-11 | 441 |
muscle cell | 3.19e-10 | 55 |
smooth muscle cell of the subclavian artery | 4.29e-10 | 5 |
muscle precursor cell | 1.74e-09 | 58 |
myoblast | 1.74e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-09 | 58 |
electrically responsive cell | 7.99e-09 | 61 |
electrically active cell | 7.99e-09 | 61 |
preadipocyte | 3.04e-07 | 12 |
smooth muscle cell of the internal thoracic artery | 3.26e-07 | 2 |
aortic smooth muscle cell | 7.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.34e-12 | 14 |
female reproductive organ cancer | 6.91e-07 | 27 |