FFCP PHASE1:Hg19::chr7:17338324..17338341,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:17338324..17338341,+
|short_description=p3@AHR
|description=CAGE_peak_3_at_AHR_5end
|association_with_transcript=17bp_to_ENST00000463496_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=196 | |EntrezGene=196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=348 | |HGNC=348 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000463496_5end | |||
|cluster_id=chr7:17338324..17338341,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_3_at_AHR_5end | |||
|id=chr7:17338324..17338341,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.47e-24!71;CL:0002057!2.08e-24!42;CL:0000766!9.90e-24!76;CL:0000860!1.11e-23!45;CL:0002009!4.11e-21!65;CL:0000839!4.60e-21!70;CL:0002194!5.46e-20!63;CL:0000576!5.46e-20!63;CL:0000040!5.46e-20!63;CL:0000559!5.46e-20!63;CL:0000738!5.19e-17!140;CL:0002031!1.34e-13!124;CL:0002087!2.77e-12!119;CL:0002371!6.39e-10!591;CL:0000763!8.09e-10!112;CL:0000049!8.09e-10!112;CL:0002320!2.61e-09!365;CL:0000048!3.05e-09!430;CL:0000134!4.53e-09!358;CL:0000063!6.83e-09!578;CL:0000723!1.19e-08!436;CL:0000012!1.50e-08!682;CL:0000548!2.29e-08!679;CL:0000004!2.29e-08!679;CL:0000255!2.29e-08!679;CL:0000988!5.91e-08!182;CL:0000034!1.07e-07!444;CL:0000037!2.32e-07!172;CL:0000566!2.32e-07!172;CL:0000144!3.83e-07!625;CL:0002032!9.18e-07!165;CL:0000837!9.18e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.36e-20;33!CL:0002057;7.36e-20;33!CL:0000473;8.13e-16;39!CL:0000234;8.13e-16;39!CL:0000576;2.65e-14;48!CL:0000766;3.14e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.14e-25,67;CL:0000860,8.01e-25,42;CL:0002057,8.01e-25,42;CL:0000766,1.85e-24,72;CL:0000473,1.27e-23,48;CL:0000234,1.27e-23,48;CL:0002009,7.68e-22,61;CL:0000839,9.72e-22,66;CL:0002194,1.11e-20,59;CL:0000576,1.11e-20,59;CL:0000040,1.11e-20,59;CL:0000559,1.11e-20,59;CL:0000738,7.70e-18,136;CL:0002031,3.76e-14,120;CL:0002087,7.22e-13,115;CL:0002320,3.10e-10,361;CL:0000763,3.79e-10,108;CL:0000049,3.79e-10,108;CL:0000134,5.52e-10,354;CL:0000048,9.00e-10,427;CL:0000723,3.36e-09,433;CL:0000988,8.64e-09,177;CL:0000034,3.22e-08,441;CL:0000037,6.67e-08,168;CL:0002032,3.17e-07,161;CL:0000837,3.17e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.62e-23!80;UBERON:0002390!6.17e-23!102;UBERON:0003061!6.17e-23!102;UBERON:0002193!1.27e-22!112;UBERON:0002405!1.93e-21!115;UBERON:0004765!4.20e-21!101;UBERON:0001434!4.20e-21!101;UBERON:0001474!7.75e-21!86;UBERON:0002204!2.72e-17!167;UBERON:0003081!2.40e-16!216;UBERON:0000926!3.23e-13!448;UBERON:0004120!3.23e-13!448;UBERON:0006603!3.23e-13!448;UBERON:0002384!6.81e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.08e-24,76;UBERON:0002390,8.46e-24,98;UBERON:0003061,8.46e-24,98;UBERON:0002193,2.30e-23,108;UBERON:0002405,3.36e-23,93;UBERON:0001434,1.47e-21,100;UBERON:0001474,2.11e-21,82;UBERON:0004765,8.96e-21,90;UBERON:0002204,4.05e-17,167;UBERON:0003081,5.59e-17,203;UBERON:0000926,1.82e-11,315;UBERON:0004120,1.82e-11,315;UBERON:0006603,1.82e-11,315;UBERON:0002384,1.01e-09,371 | |||
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| ||
|short_description=p3@AHR | |||
}} | }} |
Latest revision as of 13:29, 17 September 2015
Short description: | p3@AHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AHR_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 17bp_to_ENST00000463496_5end |
EntrezGene: | AHR |
HGNC: | 348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.14e-25 | 67 |
classical monocyte | 8.01e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.01e-25 | 42 |
myeloid leukocyte | 1.85e-24 | 72 |
defensive cell | 1.27e-23 | 48 |
phagocyte | 1.27e-23 | 48 |
macrophage dendritic cell progenitor | 7.68e-22 | 61 |
myeloid lineage restricted progenitor cell | 9.72e-22 | 66 |
monopoietic cell | 1.11e-20 | 59 |
monocyte | 1.11e-20 | 59 |
monoblast | 1.11e-20 | 59 |
promonocyte | 1.11e-20 | 59 |
leukocyte | 7.70e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 3.76e-14 | 120 |
nongranular leukocyte | 7.22e-13 | 115 |
connective tissue cell | 3.10e-10 | 361 |
myeloid cell | 3.79e-10 | 108 |
common myeloid progenitor | 3.79e-10 | 108 |
mesenchymal cell | 5.52e-10 | 354 |
multi fate stem cell | 9.00e-10 | 427 |
somatic stem cell | 3.36e-09 | 433 |
hematopoietic cell | 8.64e-09 | 177 |
stem cell | 3.22e-08 | 441 |
hematopoietic stem cell | 6.67e-08 | 168 |
hematopoietic oligopotent progenitor cell | 3.17e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.17e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.08e-24 | 76 |
hematopoietic system | 8.46e-24 | 98 |
blood island | 8.46e-24 | 98 |
hemolymphoid system | 2.30e-23 | 108 |
immune system | 3.36e-23 | 93 |
skeletal system | 1.47e-21 | 100 |
bone element | 2.11e-21 | 82 |
skeletal element | 8.96e-21 | 90 |
musculoskeletal system | 4.05e-17 | 167 |
lateral plate mesoderm | 5.59e-17 | 203 |
mesoderm | 1.82e-11 | 315 |
mesoderm-derived structure | 1.82e-11 | 315 |
presumptive mesoderm | 1.82e-11 | 315 |
connective tissue | 1.01e-09 | 371 |