FFCP PHASE1:Hg19::chr7:16793440..16793451,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:16793440..16793451,+
|short_description=p2@TSPAN13
|description=CAGE_peak_2_at_TSPAN13_5end
|association_with_transcript=89bp_to_NM_014399,uc003stq.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27075 | |EntrezGene=27075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21643 | |HGNC=21643 | ||
|TSSclassifier=strong | |||
|UniProt=O95857,Q6FGK0 | |UniProt=O95857,Q6FGK0 | ||
|association_with_transcript=89bp_to_NM_014399,uc003stq.2_5end | |||
|cluster_id=chr7:16793440..16793451,+ | |||
|description=CAGE_peak_2_at_TSPAN13_5end | |||
|id=chr7:16793440..16793451,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.01e-13;32!CL:0002595;3.73e-10;5!CL:0000784;5.74e-10;3!CL:0000192;9.14e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.59e-13,32;CL:0002595,2.67e-10,5;CL:0000784,5.49e-10,3;CL:0000192,3.76e-09,43;CL:0000514,3.76e-09,43;CL:0000393,5.02e-09,61;CL:0000211,5.02e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000514;9.14e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.49e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.39e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004111!2.15e-10!241;UBERON:0000025!6.54e-10!194;UBERON:0000956!1.49e-08!25;UBERON:0000203!1.49e-08!25;UBERON:0000477!4.54e-08!286;UBERON:0000073!5.55e-08!94;UBERON:0001016!5.55e-08!94;UBERON:0001950!1.87e-07!20;UBERON:0005743!1.93e-07!86;UBERON:0002619!4.09e-07!22;UBERON:0001017!4.41e-07!82;UBERON:0002780!6.13e-07!41;UBERON:0001890!6.13e-07!41;UBERON:0006240!6.13e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;7.74e-11;7!UBERON:0003834;3.73e-10;5!UBERON:0001533;3.73e-10;5!UBERON:0004573;2.19e-08;33!UBERON:0004571;2.19e-08;33!UBERON:0001637;4.16e-07;42!UBERON:0003509;4.16e-07;42!UBERON:0004572;4.16e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,4.94e-11,7;UBERON:0003834,2.67e-10,5;UBERON:0001533,2.67e-10,5;UBERON:0001637,1.94e-09,42;UBERON:0003509,1.94e-09,42;UBERON:0004572,1.94e-09,42;UBERON:0004573,4.41e-09,33;UBERON:0004571,4.41e-09,33;UBERON:0007500,3.59e-08,59;UBERON:0001981,3.59e-08,59;UBERON:0004537,3.59e-08,59;UBERON:0006965,3.59e-08,59 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,2.45733936501509,0,0.655324116390517,0.263766978228454,0.123766352960047,0,2.01697543935533,3.01347264011988,0,0,0,0,0,1.43117993565528,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,2.62339686735876,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.488124115096339,0,0,0.17859945656816,0,0.225222960966644,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0.49333509683432,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.680593098960126,0.358779271377724,0,0,0.600182192168805,0.206105058476878,0,0,0.337552664482532,0.389748020644795,0,0,0,0.710019185033229,0.806016785821122,0,0.386521706326594,0.272746120590835,0.573609190778008,0.243947412259191,0.132529768321485,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0.588664395376038,0,1.4763109092493,0,0.4115740113314,0,0,0,0.590789906681404,0,1.96781501668982,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,1.62786481617433,0,0,0,0,1.50719688529793,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,1.30139853857622,3.09315525111078,1.17261385734044,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,4.47179963489002,0.601519410909855,0.552485933615378,0,0,0,0,0.15403067420883,0.784349769176855,0,0.211103257785751,1.13733384070897,0.680374821106063,0.215915916102139,0,0,0,0,0,0.671624264166535,0,0,0,0.328014645699706,0.325378394664303,0.515205058238611,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.661139661443912,0.576570202095319,0,0.10115778085555,0,2.20368642781448,0,0.616067160352178,1.06461206063404,0.869932992075073,1.29726953372744,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,1.2130948894399,0,1.68503382495592,0,3.89941583410055,0,0,0,1.13008116620243,1.65409603063837,1.32687795048244,1.31535265576129,0,0,1.62328301570163,0,0.563391205064483,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0.288666338176536,0,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,1.99579371432817,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0,0,0,0.47748896947538,1.18785872333055,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0.260427761085233,0.437299999980979,0,0.341380344856499,0,0.709163045303809,0.689486746482929,6.70690610781485,0.347249989866585,0,0,0,0,0.295547618953547,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0,0.366390373607449,0.533034776018635,1.02193298195737,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0,0,0.163232808159148,4.94735750018793,0.216388639742091,0,0.353830258013357,0,0,0,0.313265848516366,0.134802265961354,0,0.234264445725339,0,0,0,0,2.41981432097328,0.91821828489147,0,0,0.207376382794494,0,0,0,0,0.284609546029793,0,1.21491816834592,0.0979923974143777,0.435296032902013,0,0,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0,0.225980740780532,0,0.19871461170299,0.696418755514666,0.782205530939212,0.480952921509202,0,0.19980960958213,0.432271251462318,1.03082936549324,1.88754497648161,1.1524383839052,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0.236349546921671,0.412079291905832,0,0.885847333632739,0,0,0.272406812223151,0.643012593860077,1.37539436597234,0.83088067605837,0.449947783103001,0,0.607495566580247,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0,0,1.02586563574658,0,0.129282956361551,0.39669780522807,0,0,1.81538601365081,1.10043013569766,0.414239055347196,0.496166021811951,0.197611631897944,0,0,0,0.2506898940227,0.612691153526923,0,0.942324577501406,2.65820453990096,0.732157589411779,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.303298235083296,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0.621748802331122,0.14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| ||
|short_description=p2@TSPAN13 | |||
}} | }} |
Latest revision as of 13:09, 17 September 2015
Short description: | p2@TSPAN13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSPAN13_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_NM_014399, uc003stq.2_5end |
EntrezGene: | TSPAN13 |
HGNC: | 21643 |
UniProt: | O95857Q6FGK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.59e-13 | 32 |
smooth muscle cell of the subclavian artery | 2.67e-10 | 5 |
plasmacytoid dendritic cell | 5.49e-10 | 3 |
smooth muscle cell | 3.76e-09 | 43 |
smooth muscle myoblast | 3.76e-09 | 43 |
electrically responsive cell | 5.02e-09 | 61 |
electrically active cell | 5.02e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 4.94e-11 | 7 |
thoracic segment blood vessel | 2.67e-10 | 5 |
subclavian artery | 2.67e-10 | 5 |
artery | 1.94e-09 | 42 |
arterial blood vessel | 1.94e-09 | 42 |
arterial system | 1.94e-09 | 42 |
systemic artery | 4.41e-09 | 33 |
systemic arterial system | 4.41e-09 | 33 |
epithelial tube open at both ends | 3.59e-08 | 59 |
blood vessel | 3.59e-08 | 59 |
blood vasculature | 3.59e-08 | 59 |
vascular cord | 3.59e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.39e-08 | 14 |